Basic Information

Gene Symbol
ct
Assembly
GCA_010583005.1
Location
NW:758164-899280[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.1e-28 3.4e-24 84.0 0.0 2 72 558 629 557 634 0.95
2 3 1.1e-32 6e-29 99.2 0.0 2 77 966 1042 965 1044 0.96
3 3 5.9e-31 3.3e-27 93.6 0.0 3 75 1198 1271 1196 1275 0.95

Sequence Information

Coding Sequence
ATGCAGGCCTCCGCGGAGGCCAACTCGCTGGATATACAGGCCATGCAGTCCATGGACTGGCTCTTCAAGAAGGAGCGCATATACCTGCTCGCCCAGTTCTGGCAACAGAGAGCGACTTTGGCGGAGAAAGAAGTATCCGCGTTAAAGGAACAACTCGCCGCGGCGAATGACAGCAATTCCAAGACTGAGGGGCACCAATTGTCTCAACCTCCGCAGGGAAACGATCAACAGCAAGTACACGATGCCAGCAATCCCAGGAGGACGCCTAACAGCAACCTCGAGCAGGAACTGCAGGCCAAAGACAAAGAGATCAGCCAACTGGTCGAGGAGGTGTCCAGACTACAACAGAGTCTGCAACGCCTTCAGGAGACAAGCGCGCAGGCAACGGCGCGGCTCGAAGAGGAGCTCGAGGCGCGCAGGCAGCACATCAGCAGACTCGAAAGCAAATTGGAACGGCAGAGGGATTATGACGACCTAAAGCGCGAAATCAATGTACTAAGGTCAGTCGACCTTTCGCAGATTCCAACCGGCGAGCCTGGCAAGAGTTTAGAACACCTTCTTATGGAGCGTACCAAGGCGTTGCAACAAGCCGAGAACTTGAAACCATCCAATACACCCGATGCACTCGGTGGATTATCGTCACCCCTGCAGCGCGCCTCGACCGCCTCGCCTCACGGGGTCGGAGGTGTGCCACCTACGTCCCATGTGTCCTCCCAACAACCACCGCCACCACCCCTGGCAGTTTCTCTCCCTCCACGTTCCACCCCGACGCCCTCTTCGGCCACCTCGACGACTTCGAGCCTCCTCTTCCCGCACTCTCTCCAAAACGTCGAGACCTTCGGCTCCTTCCTCGGTGAAGAAATCGTCGCCAATTGGAGGCGGACGTTGGAAAAGTCTTTCATAAGTCAGCAACAgccgcagcagcaacaacaacagcagcagcagcagcagcagcagcagcagcagcaacagcaacagcaacagcagcagcagcaatcgtcgcagcagcagcaacagcaacagcagcagcaaccgtTGGCTCAATTGACTCAGTTGACTCAACAGCAGTTGCAGCAAACTCAGCCGCACATGGGTTTACATCCGCCGACAACGCCAAGTAGTCTAAATCATCTTCCCTCGCCGACGGATCCGTCGTCCACCTCGAACACCCCGGCGAAGTCGAACACGCCAATCGGCACGACACCTCTAGGGAGTCTAGACGTCGCTGAAAAGGCGCCGACGCCGGTGTCGGGACACGAGACGCCGGCACCACCGACGCCATCCTCCACAACCGCCTTAACATCGCCGCCGAGCTTTCAACCGCCAACGTCGATGGTAGAAAGTAGTACCCCCTCGGCTTCTATCAACGGTGGCGGTCTCACATCCGGCGTGCCCAACGCGCCGCCACCCAAGAGCCCGGCTGACCAAGAATCATgtcataacaataataacagcCATCACCTAGCGAACAACAACATCGGCGGCCTGAGCGTCCTCGACACGCTGAAGAGTCCGTTTCGCTTCGACGACCGAACGCATCCCTTCCGATTCGGCGACGAGTTCGGGGCTGCCGGTATGGCCGGTCGGCTGGGCGAGTCACTCATTCCAAAGGGCGATCCCATGGAGGCGAGGTTGCAGGAGATGCTGCGTTACAATATGGACAAGTACGCCTCGCAAAATCTCGACACTCTTCACATAGCTAGGCGAGTGCGTGAGTTATTGTCGATACACAATATCGGACAAAGACTGTTTGCCAAGTACGTTCTCGGACTGAGTCAAGGCACTGTCAGCGAGTTACTCAGCAAACCCAAGCCCTGGGACAAGCTGACCGAAAAGGGCCGCGACAGTTATCGGAAGATGCACGGCTGGGCTTGCGACGACAACGCCGTAATGCTGCTCAAATCCCTGATCCCCAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCATTCGCACGTGGACCACAGGATAGTGGTCCGCCAGAAATGAGTGACGAAAGACTGGCTCATATACTGTCGGAGTCGGGCCATTTGCAAATGAGGAGTGAGCACGAGGTGTCAAATGATGCGGACAGTAAGAGTCCGAGTAGAATCGGTTGCCCGAGTCCGTTCAGCAAAGACAGATTGGATAGTCAAAACAGGAGATTAAAGAAGTACGAAAACGACGACATTCCCCAGGAGAAGGTGGTGAGAATCTACCAGGAGGAACTGGCTAAGCTGATGGGTAGAAGAGTGGAGGATCTTCGTCCGCGAGAGTTTCCTCATAGTGCGATTTTTCCGCATTTTTTTAGCGGTACCCAAGGCAGTCTTCAAGGCATCGAGCGCACCCAGGAAGACATTCGACTAGCATTGGATGCTTATCATCGTGAGCTTCAGAAATTGAACGCCGCACCAGGACAAACTCCCTCGATTACCGGCCTACCAGGATTACCTGGGCTTCCAGGCTTGCTGGCGCTTCAACAACAAGCTCTCCAACAACATCATTTAGCCGCAAACGGCGGCGGTGTTCAAGATCTGAGCTTAGGCAAAGTGGATCCGCGTAATAAGATGATAAACGGCGTAtcggaagaggaaaaagaaaaaatggagGAGGCAATGAGACATGCCGGGAGTGCCTTCTCCTTGGTGAGACCAAAGCAGGAATCAACGGGTCCTCAATCGACACCCGGTGGTTCCAGCGCGAGTTCGCCATTAGGCAATTCCATACTTCCCCCAGCGATGACACCTAACGAGGAGTTCTCCGGTGCGGCGGCAGCCAGTCCTCTTCAGAGGATGGCTTCCATTACAAACAGTCTGATAAGTCAACCGTCCACGCCAACTCACCATTCGGCCAATCAAAGGCCGTTGAAAGCTGTGCTTCCACCGATCACGCAGCAACAATTCGACATGTACAATAATCTTAACACGGAAGATATCGTGAAGAGAGTGAAAGAACAGCTGTCTCAATATTCGATTTCGCAACGACTATTTGGCGAGTCGGTATTGGGTCTGTCTCAGGGATCAGTATCAGATCTTCTCGCGCGTCCCAAACCGTGGCATATGTTGACCCAAAAAGGTCGCGAGCCCTTCATCCGAATGAAAATGTTCCTCGAGGACGACAACGCGGTACACAAACTGGTCGCTAGCCAGTACAAGATCGCTCCGGAGAAGCTAATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCATGTGGAACACCTATGAAACCTATGCCACCAACGAAACTCGTCCAAGAACAACTTCAAAACGCGGCAAAAGCACAAGCCGCCGCACAGGCGGCTGCGCAAGCTGCGGCACAACATCAACAGGAAAATCAGATGCAGCTTGGACCACCTCAGCAGAGTCCACAACATCCGCAACATCCACAGCCACCACCGCCAATGATGCTAACGCCGCCCGGTCCTCATCACCCTCATACTCAACTTAGCATGCAGGAACTTCAGAAgaaacaacagcagcagcagcaacaaatGTCTGCACTGCACTCGCCGCACCATCAAATGGCGCCGTCGCCTCTTCGAGGTCTTCATCCGCATATTTCACCAAGTGTATATGAGATGGCCGCCCTTACGCAAGATCTCGACACACAAACGATCACCACAAAGATCAAGGAAGCATTGCTGGCGAACAACATCGGCCAGAAGATTTTCGGTGAGGCGGTTCTCGGTCTGTCGCAGGGCTCCGTCAGCGAACTGTTGAGCAAACCCAAGCCATGGCATATGCTCAGCATAAAGGGTCGAGAACCTTTCATCAGAATGCAACTTTGGCTGTCAGACGCGCACAACGTCGATCGACTGCAAGCGTTGAAGAACGAACGACGAGAGGCGAATAAAAGACGACGTAGTAGTGGCCCTGGCCACGATAATAGTTCCGATACTTCGAGCAACGATACCGCCGAATTTTATCATGCGGCATCACCCGGCCCGGGGCCGGCCTCCGCGAAGAAGCAGCGCGTCCTCTTCTCGGAGGAACAGAAAGAAGCTCTTAGACTCGCTTTTGCCCTTGACCCGTATCCTAACGTGGCCACCATTGAATTTCTCGCTGGTGAACTCGCCCTGTCCTCGAGGACGATAACGAACTGGTTTCACAATCATCGAATGAGACTGAAGCAACAGACGCCGCATGGCCAGCCGGAGCCACAATCGCCGCGAGAACCCGGCCAACCGTTCGACCCTGTTCAATTCAGACTACTCTTGAACCAAAGACTGCTGGAGATTCAGAAGGAGAGGCTGGGTCTGGGGAATGTACCTCTACCATACTCTCCGTACTTTAATCCCAATCTAGCGACCTTGGTAGGAAACGCTCTAAAAGAACAATGTTCCGGCCTCGACCTTTCGATGAACGCTCTGAAGAGAGAGCCCAATCAAGAATTCGAGGATGAAGACGCCGAGGACGCAATGAGTAATTTAGGTAGCGAAGATTCAGACGGTTCGGCTGGTAGTATAAAGAGAGAACCTGCAGAAACGCCGACAGCGCCCACCACGGTCAGGTCCAATAGAAGAAAACCCGCGGCACCGCAGTGGGTGAATCCAGAGTGGCAAGAACCTACGAGAACGGGCGACGAGGTAATCATTAATGGCGTGTGTGTAATGCAGACGGACGATTACGGCGTGAAGAGAGAGGCCGAGGAGACTATAAGGGTCGAGCCGACTCCAGTGCAGGACAGATACGAAGAAGACGCCCAGAGTGATGTCTCTTCCGTATCCGGTAACAATGGAGCCGACCGGGATAGCCCGCTGCCAAGTCCAAAATCCGGTCAGAATAGTCCAGTGACGTCGCCCAGACCGCCGTCGGTGCAGCAGACGCAACAATCGACGGAGGAAAGTCCAAAGGACGTAGTGAAGCACGAGCCGGAGGAAACGTGGGATTACTAG
Protein Sequence
MQASAEANSLDIQAMQSMDWLFKKERIYLLAQFWQQRATLAEKEVSALKEQLAAANDSNSKTEGHQLSQPPQGNDQQQVHDASNPRRTPNSNLEQELQAKDKEISQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHISRLESKLERQRDYDDLKREINVLRSVDLSQIPTGEPGKSLEHLLMERTKALQQAENLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPTSHVSSQQPPPPPLAVSLPPRSTPTPSSATSTTSSLLFPHSLQNVETFGSFLGEEIVANWRRTLEKSFISQQQPQQQQQQQQQQQQQQQQQQQQQQQQQQSSQQQQQQQQQQPLAQLTQLTQQQLQQTQPHMGLHPPTTPSSLNHLPSPTDPSSTSNTPAKSNTPIGTTPLGSLDVAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVESSTPSASINGGGLTSGVPNAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFGDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDDNAVMLLKSLIPKKEYVSGKEQGMPAFARGPQDSGPPEMSDERLAHILSESGHLQMRSEHEVSNDADSKSPSRIGCPSPFSKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRPREFPHSAIFPHFFSGTQGSLQGIERTQEDIRLALDAYHRELQKLNAAPGQTPSITGLPGLPGLPGLLALQQQALQQHHLAANGGGVQDLSLGKVDPRNKMINGVSEEEKEKMEEAMRHAGSAFSLVRPKQESTGPQSTPGGSSASSPLGNSILPPAMTPNEEFSGAAAASPLQRMASITNSLISQPSTPTHHSANQRPLKAVLPPITQQQFDMYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHTQLSMQELQKKQQQQQQQMSALHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYSPYFNPNLATLVGNALKEQCSGLDLSMNALKREPNQEFEDEDAEDAMSNLGSEDSDGSAGSIKREPAETPTAPTTVRSNRRKPAAPQWVNPEWQEPTRTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGADRDSPLPSPKSGQNSPVTSPRPPSVQQTQQSTEESPKDVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00729955;
90% Identity
iTF_00221825;
80% Identity
iTF_01087107;