Basic Information

Gene Symbol
grh
Assembly
GCA_010583005.1
Location
NW:82297-229719[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.1e-63 2.9e-59 199.4 0.0 24 221 770 969 757 971 0.91

Sequence Information

Coding Sequence
ATGTCGACGTGTACTGACGAAGCCGATAACGCACCCCTGCACATGCAGGAGGCTCTGTCTCCGGTGCAGGAGGCACCAGTCTCGCCGGCGTCCTCCTCTCTGAGCAACCAAAATCAAAATGAGAGCGAGCAGCAGGTACTGCTGGCGACGATGCAGCCGGTGAACGTGCTCGACCTGCACGAGCCGCCGGCCGTGCACACGCTTCACCCCAAgtaccaccatcaccatcaccgccaccaccatcatcaccaccatcatcaccaccagcagcagcaacaacagcagcaacataTCCAGGGTGACCCGGATGACGTTCAACAACGCGCTCCGGACGATCCGGATGGCCGGGTGACCCCCGGCGCCGAGACAGCCGCAGGCAACGCGGCCCTCGGCGTTGGCGAGCACAAGATGATCGATCTCATCTACAACGACGGTCAGAAAACGGTCATGTATACTCATGATAAGGAAATCATCTATGAGAATGAAGCGGACCGCGTACAAGTGGTCGAATatccaccgccaccgccgtcgccgccatcTCCGTCACCTCCGTCAGCTGTAACGAGAGCGACAGGCTTGTTGCCGCCAACCTGCGTCACTCCCAGGTCCGCTTCGGCGGCGACCGCGACTGCCCTGCATCTGCATCATTATCCGCAATTACAACTGCAGCATGAGGACGACCTGCCGCCGACGGTGCGCCACGCGGTTAGCGCAACGGTGCCGAATTGCGGCTCCGCGACCACCACGACGACGGTCCTGGTACTGTCAGAGCTCGTCGCCGCGGATCCAGCCTCCGGTGCGGCCGCAGCTGCCCAACAACTGACgctcaccgccgccgccgctgcagcGTCTCTGCGTGCCGGGCGACGCAGCCGCAGCGAGGAGGACACCAACGGCAACGTCGTCAGCGACGacgcgcagcagcagcagcaacagcaacaaggTTACGTATCGGGTCAGCGTGAGccggaagaggaggaagagctGGGGGCAGAAGAGGCGGCGGCCCAGGCGGCGCAGTCCCTGCAGAGCGGCGCCGAGGGCGCCGATCCGGAAGTCCACAAAAGGGTCGCCGCTGTGCAGGTGCAGGTGCAGGGTATGGAGGGCGACTGGCGCGCCTACTGCGAGCATCCGCTCTCCGTGGCGACTGCGGCAATGCTAAActtgcagcagcagcaccaggtGTCGGCGGTAGCCAGCCATGGAGACGATCCCTCCGCGTCCTACGTTTATGAGTACTACAAACTACCCGAGAAAACAGCAGCGGACGTCAAGCTGCCGCCCACGCACGAGCTCTGGCCTACGGGTGTGATGGGCCAGAAGCTGCTGGTGCAAGAGGCGCCTGGCTCTGGTTCCGGCTCGACGAATCGCATGGAAGGCGGCGAAGGCGCCGGAGGAGGGGAGCTTCACCACTTCCTCCATCAGTACAACCAGCAGTCCCACAGTCCCGGCCAGAGCCTGCAGGGTGGCCTTCCGCTTCCGCTGAGCCCGCAGTCCCTGCGACACGACGGTGCCTCGAGCGCCGGCATCGCCGGGGTCAAGAGGGAACCAGAGGACCTCAGCTCGTCGCGCGGCGGCCAGCAATCCAGCAAACGGCACAAACAGGCGCAGCCGGACAGTCCGACACCGCCGGGGATgtaccatcatcatcatcaacaGCTACAGGTGCAGCAATACGGCAGTCCCTACGACCCCTACTCATCCTGCAGCCCGCGGTTGCAGTCGGCCGCGTACACCTCCACGTCGGCGACCGGGACAGCGAATGCGGCGAACCAAGGCGGCCTCCATCAGGAGGCGACGACGGTCTACGTCGCAGGCGACACTCTACCGCCGCTCGCATCGTCGAGCGCGCCCTCGTTGTCTACCACGACCGCTTCGTACACGAGGTACGAGGTTGTGCCGAGCTCATACGCTACGACACACGCGATACGCTCGTCATCGAGCAGCAGCAAAGTGCTGACCGTTGATCTTCCCAGCCCCGACTCCGGTATAGGCGCCGACGCGGTCACACCCAGGCAGGACCATCATCCGCCCACGGCGCTTCATCAGTCCTCGTTCGATTACACGGAACTATGCCCCGGCGGGACGACAGCCGGAGCGGCGGTGGTCCTCGAGAGCGGCGCCGTGATACACCACCAACCCCTGCAGCTACAGCTGCAACAGAGCCACGCGCAAGCACAGGTGCAACGAAGCGGTCTCGTGTCCGCAGGTGCGACGAATCCAAATCCGAATCCGAACCCGCCGAGGTCGCGGCCTTGGCACGATTTTGGCAGGCAAAACGACGCCGACAAGATACAGATACCGAAAATTTACTCGACCTACGGATTTAAGTACCACCTGGAGTCGCCAATCAGCACGTCGCAGCGACGCGAGGACGACAGAATAACGTACATCAACAAGGGCCAATTCTACGGGATCACGTTGGACTACGTGCCCGATCCTGACAAGCCACTCCTCAAGGCAGGACAGACAGTCAAGAGTGTGGTAATGTTGATGTTTCGCGAGGAGAAGAGCCCGGACGACGAGATCAAAGCTTGGCAGTTCTGGCATGGTAGACAACACTCCGTCAAGCAACGAATTCTCGATGCTGACACAAAGAACAGCGTCGGCCTAACAGGCTGCATAGAGGAAGTCGCGCACAATGCGATTGCCGTTTACTGGAACCCACACGAAACGTCGGCGAAGATAAACGTGGCGGTGCAGTGTCTCAGCACCGATTTCTCGAGTCAGAAGGGCGTGAAAGGTCTACCGCTGCATATTCAGATCGACACGTATGAGGAACCGCCACCCCACACGCACACTTACACGCCGCCTTCCCATCGCGGCTACTGTCAAATTAAGGTCTTCTGCGATAAGGGAGCGGAGAGGAAGACTCGCGACGAGGAGAGACGCGCGGCCAAGAGGAAGATGTCGGCGACCGGCAGAAAAAAGCTCGACGAGCTTTATCACTCCGTCACGGAGCGCAGCGAGTTTTACTCCATGGTCGATCTGCACAAACCGCCGGTGCTGTTCTCGCCGCCAGCCGAGCACGCCATCGACAAGTTCTCGACGATGGAGTTGTCGGGCTTctacggtggtggcggcggcgggggCGGTGGTGACACCGACACCTCGTCCCTCAGTAACGGTGAAAGTGGAGGATTGAAGGCGGGGGGTAGCAGCCCCTATCCGGCATGCGGCAGACCCAGCTTGCCGGCCCTCAAGTTCCACAACCACTTTCCGCCCGACAATCTCAGTAGTCTACACGACAAGAAGGACTCGTTGCTGATGCAGGTGCAGGAACTGCAGGGCTCGGTGCTGCAGGGGGTACAACAGGCCGGTCTCACGGGCACGGTGGTGTCCAGCGTTGGCAATCGACTGCATTTACAACAGCAGCCTCAACACTTGCGCCCTGCTGACGCCGAAGAACGCGTAATGCTATACGTACGTCAGGAGTCGGAGGATGTCTATACACCACTGCATGTCACACCGCCGACAGTTCAAGGACTGCTCAATGCTaTTGAGTCAAAGTACAAAATTGCATCCTCGAGTATTAATAACCTCTATCGCAAAAACACAAAGGGAATTACAGCGAAAATTGATGACGACATGATCCGGTATTACGTCGATGAGGACCTATTTCTGCTGGAGGTGAGCCACTCGCGGATCAATCCGGACCCGAGCGGCGATCGCAATCCGAACAATCCGGGCTCGCCGAGCGACCCCAACGACCCGGGAGATCCTCCCACCACGGCCGGGTACGACGTCACTCTCATCGAGCTGCCCTCATCGCCGCCGCATCTACCGCATTCACCTCTCGCCAACTCcgcgcacgcacatacgcacgTGCACGACAACGGCAACACGTGA
Protein Sequence
MSTCTDEADNAPLHMQEALSPVQEAPVSPASSSLSNQNQNESEQQVLLATMQPVNVLDLHEPPAVHTLHPKYHHHHHRHHHHHHHHHHQQQQQQQQHIQGDPDDVQQRAPDDPDGRVTPGAETAAGNAALGVGEHKMIDLIYNDGQKTVMYTHDKEIIYENEADRVQVVEYPPPPPSPPSPSPPSAVTRATGLLPPTCVTPRSASAATATALHLHHYPQLQLQHEDDLPPTVRHAVSATVPNCGSATTTTTVLVLSELVAADPASGAAAAAQQLTLTAAAAAASLRAGRRSRSEEDTNGNVVSDDAQQQQQQQQGYVSGQREPEEEEELGAEEAAAQAAQSLQSGAEGADPEVHKRVAAVQVQVQGMEGDWRAYCEHPLSVATAAMLNLQQQHQVSAVASHGDDPSASYVYEYYKLPEKTAADVKLPPTHELWPTGVMGQKLLVQEAPGSGSGSTNRMEGGEGAGGGELHHFLHQYNQQSHSPGQSLQGGLPLPLSPQSLRHDGASSAGIAGVKREPEDLSSSRGGQQSSKRHKQAQPDSPTPPGMYHHHHQQLQVQQYGSPYDPYSSCSPRLQSAAYTSTSATGTANAANQGGLHQEATTVYVAGDTLPPLASSSAPSLSTTTASYTRYEVVPSSYATTHAIRSSSSSSKVLTVDLPSPDSGIGADAVTPRQDHHPPTALHQSSFDYTELCPGGTTAGAAVVLESGAVIHHQPLQLQLQQSHAQAQVQRSGLVSAGATNPNPNPNPPRSRPWHDFGRQNDADKIQIPKIYSTYGFKYHLESPISTSQRREDDRITYINKGQFYGITLDYVPDPDKPLLKAGQTVKSVVMLMFREEKSPDDEIKAWQFWHGRQHSVKQRILDADTKNSVGLTGCIEEVAHNAIAVYWNPHETSAKINVAVQCLSTDFSSQKGVKGLPLHIQIDTYEEPPPHTHTYTPPSHRGYCQIKVFCDKGAERKTRDEERRAAKRKMSATGRKKLDELYHSVTERSEFYSMVDLHKPPVLFSPPAEHAIDKFSTMELSGFYGGGGGGGGGDTDTSSLSNGESGGLKAGGSSPYPACGRPSLPALKFHNHFPPDNLSSLHDKKDSLLMQVQELQGSVLQGVQQAGLTGTVVSSVGNRLHLQQQPQHLRPADAEERVMLYVRQESEDVYTPLHVTPPTVQGLLNAIESKYKIASSSINNLYRKNTKGITAKIDDDMIRYYVDEDLFLLEVSHSRINPDPSGDRNPNNPGSPSDPNDPGDPPTTAGYDVTLIELPSSPPHLPHSPLANSAHAHTHVHDNGNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01523136;
80% Identity
-