Oalb002569.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- grn
- Assembly
- GCA_949825065.1
- Location
- OX463838.1:34361604-34379276[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-19 1.7e-15 57.3 7.7 1 35 83 116 83 117 0.97 2 2 0.18 4.6e+02 1.5 0.5 3 15 185 198 184 200 0.72
Sequence Information
- Coding Sequence
- ATGAATAGCCGCGGATCGGCGGAAAGCCGTCTTGAGGAAATCTGCCGAGAAAGATGGCGGGCGCGCCTGTGCAGTGCCATCGAATTTTCCGCGATGCTCTGCCGCCCCGCCAGCCCCGGTCCCCGCGCCAGTGCCCCGGCAGCCAATGGGCGGGCGCCTCCCCGCCACCCCCGCCCTCCCCCAGCCGCGTGCACGCGCATGCACACGATTTCACTGCAGAGTGCAGCGCGGCGGGCGGGGACATCCTGTGCGAACTGCAAGACCACCACCACCACGTTATGGAGGCGCAACCAGAATGGCGAGCCAGTCTGCAACGCGTGTGGACTCTACTATAAGCTTCATAATCGCGATTGTGTGCGGCTAAATGGCAATCAAGGGCGAGGGGGAGGTGAGTTGAGGAGTGGGGTCAGAGCATGCAGGGGTGGCATCCGCCTACATAGTCGCCCACCCGGCAATTGTTCGGGGCTTATGACAACAGCGGGGTTTAACTCCTCTCTCCCCACAATAGCGGGTTTACATGTGAGTTGTAAAAGTTTTATTGATGTCGATACATCGTGTACCGTCTGCAAGAGCCCCTCCCTCTGGCGGCGAGTGAAGTTATCGTTTTGGTGGGTCGGGGGCGGGGGCGGGGTGGGAGGATGGAGCGGACTTGGTGCGTGCGCCTCCCTCCTCAAGGTGGAAAACTATGTCCTCCAGGACCAACATTAG
- Protein Sequence
- MNSRGSAESRLEEICRERWRARLCSAIEFSAMLCRPASPGPRASAPAANGRAPPRHPRPPPAACTRMHTISLQSAARRAGTSCANCKTTTTTLWRRNQNGEPVCNACGLYYKLHNRDCVRLNGNQGRGGGELRSGVRACRGGIRLHSRPPGNCSGLMTTAGFNSSLPTIAGLHVSCKSFIDVDTSCTVCKSPSLWRRVKLSFWWVGGGGGVGGWSGLGACASLLKVENYVLQDQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -