Oalb018895.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- -
- Assembly
- GCA_949825065.1
- Location
- OX463850.1:32707779-32722024[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.2 16 7.2 3.3 1 23 1112 1135 1112 1135 0.91 2 12 0.0028 0.22 13.0 1.0 1 23 1222 1244 1222 1244 0.98 3 12 3.7e-05 0.0029 19.0 0.8 2 23 1247 1268 1246 1268 0.96 4 12 0.0037 0.29 12.7 2.8 1 23 1274 1296 1274 1296 0.98 5 12 0.00055 0.043 15.3 5.3 2 23 1303 1324 1302 1325 0.95 6 12 0.00068 0.053 15.0 2.9 3 23 1363 1384 1362 1384 0.97 7 12 0.18 14 7.3 0.5 2 23 1400 1420 1399 1420 0.97 8 12 0.00013 0.01 17.2 0.7 1 20 1426 1445 1426 1448 0.92 9 12 0.0077 0.6 11.7 1.1 1 23 1456 1478 1456 1478 0.98 10 12 0.02 1.6 10.4 7.3 1 23 1484 1506 1484 1506 0.98 11 12 3.6e-06 0.00028 22.2 0.8 1 23 1512 1536 1512 1536 0.97 12 12 0.00052 0.04 15.4 4.4 1 23 1542 1564 1542 1565 0.95
Sequence Information
- Coding Sequence
- ATGGAGACAATGGATCAGTTGGTGCAATGTCCCGTTTGCACGCTCTACCTGCACGAGGGCATGTCCTTGAGCGCCCACCTGGACACGCACCCCAAGGACCAGGTGATTAACGCCCTTTGCAACCTAGCCAAGAATGGGAAGGTGATTTCCCAGTATGGCAGTAGGTGCAGCACTCCGTACGAGTCGGACCGCTCCTACCGTAGCCGTTCCCGCACGCCCGCCTGCGATCGCCGCTATCGCCACCTGCGCACGCCACACGCGCATTCGCCCACTCTGCCCTACCGCCCCTCCTCCAAGTCGCTGGACTCGGAAGCCACTACCTCCACCAGCAAGTCTGATTCCTTCCAGAATGCGCGCCTCACCATGGACTCTAGCCGCGTTGTGGCCACACCGGTGCCTGCTGAGCCTATTTTCATCGACAAGTCTGACTCTCTCGGCATTAGTGCCAGTAATGTGTCACTTGAGCAGGTTTTTTTCATCCCTCAGAACAACGGGTCACAAAGAGAATTTCCCGTTAGGAATTTCAGCAGACATGGTGAATTTGTTTTCAACAAGAATAGCAATGAATCCTTGACTATGACCTCCTATGTGCAACCTAAAATTAGTAATCAGTCACCATCTGTGTTCACATCAAAATCTCTCACTCCGAACCCGTTAGAAGAGAGAAGAGAAAACCAAACTCTATTGAAAGGAAGCGCGACTCCGTTGCAGTACGTGACGTCAAATAATAAACCTGTGCGTTTTGTAGTTCCTGCTCAAAATTCCTATGTGCAAAATACTCATAAAAACATTGTGATTTCTACTGTACCTAGGACAGAGTCAATTCACGAAAATAAAAGTGTTCCCCGATCTGTGCATACTAACCAATTTTCTTCCATTAATGCCATATCTACTCAACGTTCATCTTTAATTTCTTCTGCATCCCAAATAGTTTATAAAGAAATGATTGATGAAACGACAGGAAAGAAATTTTTGTCTCCAATAccgttattaaaaaatagggaGGATGTTGATCCTCAACATAATGTAATGTATCAAAATTTGATGGCATTTAATTCGTACGAGACTCTGTACCCTCAACAGACCTCTAATGATAGTCAGCATAGTGATTCTTTCTATACCGAGTCTGCTGTAAACACTGACATTCCTGAGAATGCTGGCGATAAGGACACTAGTGAACTAATCATCGAAAGTGAGCAAACTTCTAGCCATAGTTCATTGATAGCCGAAGAAAACTTGGAACACATAGAAGTTGAACTTAATAATTCTTCTGATAATGTTGATAACACTTTAGATACTCAAatagaaattgaaataaacGATGGGTCTCCTTTAATGTTGGATCAAGGTGATAGTGAAAATATTAGTGATAATTCTTCTAAGGGGGGAATTAAAATATTGAGCAACGTGAAGGTTGAACTTCCCATACAAAGCATGCCTGAAATTATAGATCTCACATCAAATAGTGACAATCAGCAAAAAACCTCTAGTATAGAACCAAATTTAAATGAGGATGAAACAATATTGCCTGATTTTGTGGATGCGGAACTTTGTCATAATTACACCCAGGCAAGATTCTGTTCTAGAGATACTTatacttttacaaataaaattgatgaaacAATACCCTGTGATGCACCCTCATCAAATAGTTCAATACCTAAATTAGGCTCGCAGACTCCCATTGTTAACACTTTttctgttataaaaaatatcggcAATCCCAACTTGCACAAAGACTCTTCAAATGCAGAAGACAATAAAACTAACGAAACTTCTACTTTACCTGATCTCACATGTAATGAAAAGCCCTCAATATCTCCCTGCAGCGATCTTACTAATGACTCAAATGAAGGAATTTACGATAGAATATGCACTTTAACTGCGACTGCAAGCACTTCTGCTAAACCTCCTCCAATTTTTCAAAACAGATTTCCATTATCGGTTTCAGCCATACCTGTAAAGCTCTCCTCAGGTACTGCACGAAAGAATCTGTTTGaaagaaaaccaaagaaaatttTATCTATAAAGCCttctaagaaaaatacattgatcAGTACTAAACCATCATCGTCAAAAAACTTATTGGTTCAGAATATTAATGAACACAAAAGTAGCCCAGAAACTTCTCGGCATAGTGACAAGTCTGAAGCTGGACAAGTTAACCATTTAAGtggatattttaatgatattgaCTACAGTCATAAGGCATCTGAAATTGTTGAGCCATTACCagcatcatctgaaaaaaacaATGAGCAAATGGACGCTAGAAATTTTCAAACTGCCCCAACGGAAGATGATTCATTAAGTTGTGATACGATAACAGATATGAAGGATCAATCAACCGAGATGGGGCCTGAGTGTGCGTCGGAAACATTTCATGATTTTAGAAACTGTATTTCAGAGAAAGAGAATGTAAAAACCAATGGCGAAGATTGTAACTCTGGTGTTGATCGTTTGCTGGATAATCTATCTCAGAAATCTTTTGTTGAACTAGAAAATATGAGGTCTGTGAATGTAATAGCATTTGGAAGTATGATATCTTCTGCATCGGAAACTCGTACAACTTCTACGTATGTGGAAGCTTCAAAATCTGACTTGGACTGTGTTGCATCATCAGAACACAAACAAGAGTTTGAGAACTTCATTCGAGATTCTTATATGGATTATTTAAATCCACATAAATCACAGTTTCCTGAGAAAGAAGATGAAGATAAAAAGGAGATTGATGAAGATGAAAAGGTTGAAATTTGCATTGTGGAAGAGAGCGGAGCCAAAGACAATGTGGAACTTATCCAATGGGAAACTCCTCAAAAGGAAGAATTTGGATTTACCAATTTTATGGATTGCAGTTATAACCAGGGGATTTATCAAAATCCTAAGGTTGTTAAAGGATATGAGGGCACCAGTGGTCAAGGAAATTATCCATCGGGAGATGCGACACATGATTATGTTGAGTTGATTTGCCCTCGAGATAACTATTTGGATCAAGACCACAAGGGTTCTTTCCTTGATGCCATGGATGCTAGTACAGCGTGTACTGTGGGGGTTGCAATGAGCGAGGTGGACACCCTCAACATCAGGACTGATGAGAGGATGCCTCCCAGAGGGGAGTTATCTGAACAGGAAAGCAGTGGAGATGTTGACACACCATGGGCTGGGGTATACTGCGATGTTGTAGGAGGTTCTACATCGTATGACCTTCTTGCTCGAGAAACGTGGCCCTCGGATGGATCAGATGTGGAGATGCCTGTCAGTCCCATCAAGAATGTGTATAATGACGCAGAAGATATTCCAATTGTGGTTGGGGTGAAGCCTCCTGAACGCAACTACAAATGTGCTACATGCGGCAAAAGCTTCAACTGCCCTAAAGAAAGAAGAGTCCACAGGACTAAAGAACATTCTAACACATCCACTGTCGTCTCTGCGTGTTTACCAAAAAAGGCCATTAAGCGACGAGCAACTCCGACAATTAAACTCATTCCTATTAAGAATGAAATAGTTAAAACAGAGGCAGAGATCCCGACAACCACAAAGACTGATTCAGAAAGTTTAACCGATCCAACCGCTGTGCCAATCAAAATTGGAGATGAAAGTTTTGAAGATAAGAAACCCAAGTTGGAACCGGTAAAGGAGGAGGTTAAGAAGCCGAAACGAGACTATACATGTGTTCAGTGCAAGCAGGAGTTCACATCCGAGCCTACTTTTAATCAGCATCTCAAGGTGCACCCCCTCGAGTGTCTCACGTgcggtaaatatttttatcgtagGGCTAACTTGCAGCTTCACATCAAGAGACATCTCGGAATTAAAAATTACAGGTGTGATATATGCGAGAAAAGGTTCATCACAAAGCAGAAGATGCTGGAGCACTACCACGTCCATACGGGCACAGCGCCCATCAAGTGCAACCTTTGCGACGAGACATTCCGGCGCCACTCCAACATGGTGCAGCATCGTAACCGCCACCACTTTCTTATCAAGAAGAGGGTGCGCGATTATGTGTGCCACTGTGGTGATGTTTTCCACTCCAAGAAGAAACTGGCTTGGCACAAAGAGATCCATGAGGATCGACCCAAGGCCTGTCTGCACTGTAGTGAAAAATTCATTCATCTCGCTTCTTTGACACGTCACATGCGCAGGGCCCACAATAATTTCTATATACCCgatgacaaaaagaaaaaagaaaatgttcaatGTCCCATCTGTGATCATGTGTACCTCAAGTCTTCCATTGACATGCATTTACGGACCCACACGGGGAGTAAACCTTATCCGTGTGTCATTTGCAACAAAAACTTTTCCACCAAGTGGAATTTGAAACTCCACCGGTGGACCCACGCAAATCGTTCTAGCAAACCTTTCAAATGTGCCCTGTGCAACGGTGCCTTTGTTAGACACACGGACTATGTCTCGCATATGAATTCGCACAAATCTGTTAGACCCTACACTTGTAATTATTGCGGTTGTCAATTTATAAGGAAATACAATTGCCAAAGGCATGTGAAAGAAcacgaaaatgttaaaaaatacgtcTGTGATGTGCCTGATTGTGGTAAAACATTTCATCGAAGTTATTATCTTTCCGAACATATGAGAGTGCATTCCGGACATAGGCCTTTCGCTTGCAATATCTGCGGGAAGACATCAAGCACAAAATCAAATCAcaataaacacataaaaatacatcacGCTCGTGAACCTGTTACTACTGAAGGATAA
- Protein Sequence
- METMDQLVQCPVCTLYLHEGMSLSAHLDTHPKDQVINALCNLAKNGKVISQYGSRCSTPYESDRSYRSRSRTPACDRRYRHLRTPHAHSPTLPYRPSSKSLDSEATTSTSKSDSFQNARLTMDSSRVVATPVPAEPIFIDKSDSLGISASNVSLEQVFFIPQNNGSQREFPVRNFSRHGEFVFNKNSNESLTMTSYVQPKISNQSPSVFTSKSLTPNPLEERRENQTLLKGSATPLQYVTSNNKPVRFVVPAQNSYVQNTHKNIVISTVPRTESIHENKSVPRSVHTNQFSSINAISTQRSSLISSASQIVYKEMIDETTGKKFLSPIPLLKNREDVDPQHNVMYQNLMAFNSYETLYPQQTSNDSQHSDSFYTESAVNTDIPENAGDKDTSELIIESEQTSSHSSLIAEENLEHIEVELNNSSDNVDNTLDTQIEIEINDGSPLMLDQGDSENISDNSSKGGIKILSNVKVELPIQSMPEIIDLTSNSDNQQKTSSIEPNLNEDETILPDFVDAELCHNYTQARFCSRDTYTFTNKIDETIPCDAPSSNSSIPKLGSQTPIVNTFSVIKNIGNPNLHKDSSNAEDNKTNETSTLPDLTCNEKPSISPCSDLTNDSNEGIYDRICTLTATASTSAKPPPIFQNRFPLSVSAIPVKLSSGTARKNLFERKPKKILSIKPSKKNTLISTKPSSSKNLLVQNINEHKSSPETSRHSDKSEAGQVNHLSGYFNDIDYSHKASEIVEPLPASSEKNNEQMDARNFQTAPTEDDSLSCDTITDMKDQSTEMGPECASETFHDFRNCISEKENVKTNGEDCNSGVDRLLDNLSQKSFVELENMRSVNVIAFGSMISSASETRTTSTYVEASKSDLDCVASSEHKQEFENFIRDSYMDYLNPHKSQFPEKEDEDKKEIDEDEKVEICIVEESGAKDNVELIQWETPQKEEFGFTNFMDCSYNQGIYQNPKVVKGYEGTSGQGNYPSGDATHDYVELICPRDNYLDQDHKGSFLDAMDASTACTVGVAMSEVDTLNIRTDERMPPRGELSEQESSGDVDTPWAGVYCDVVGGSTSYDLLARETWPSDGSDVEMPVSPIKNVYNDAEDIPIVVGVKPPERNYKCATCGKSFNCPKERRVHRTKEHSNTSTVVSACLPKKAIKRRATPTIKLIPIKNEIVKTEAEIPTTTKTDSESLTDPTAVPIKIGDESFEDKKPKLEPVKEEVKKPKRDYTCVQCKQEFTSEPTFNQHLKVHPLECLTCGKYFYRRANLQLHIKRHLGIKNYRCDICEKRFITKQKMLEHYHVHTGTAPIKCNLCDETFRRHSNMVQHRNRHHFLIKKRVRDYVCHCGDVFHSKKKLAWHKEIHEDRPKACLHCSEKFIHLASLTRHMRRAHNNFYIPDDKKKKENVQCPICDHVYLKSSIDMHLRTHTGSKPYPCVICNKNFSTKWNLKLHRWTHANRSSKPFKCALCNGAFVRHTDYVSHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVKEHENVKKYVCDVPDCGKTFHRSYYLSEHMRVHSGHRPFACNICGKTSSTKSNHNKHIKIHHAREPVTTEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -