Basic Information

Insect: Odontocerum albicorne
Gene Symbol: zfh1
Assembly: GCA_949825065.1
Location: OX463851.1:17469241-17470230[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0032 0.25 12.9 0.2 2 21 110 129 109 130 0.93

2 7 0.001 0.079 14.4 1.5 1 21 161 181 161 182 0.92

3 7 2.8e-05 0.0022 19.4 1.7 3 23 193 213 192 213 0.99

4 7 0.014 1.1 10.8 3.8 2 23 224 244 223 244 0.97

5 7 8.8e-07 6.9e-05 24.1 1.0 1 23 250 272 250 272 0.97

6 7 1.6e-06 0.00013 23.2 1.7 1 23 278 300 278 300 0.96

7 7 2.6e-07 2e-05 25.8 1.3 1 23 306 328 306 328 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0032	0.25	12.9	0.2	2	21	110	129	109	130	0.93
2	7	0.001	0.079	14.4	1.5	1	21	161	181	161	182	0.92
3	7	2.8e-05	0.0022	19.4	1.7	3	23	193	213	192	213	0.99
4	7	0.014	1.1	10.8	3.8	2	23	224	244	223	244	0.97
5	7	8.8e-07	6.9e-05	24.1	1.0	1	23	250	272	250	272	0.97
6	7	1.6e-06	0.00013	23.2	1.7	1	23	278	300	278	300	0.96
7	7	2.6e-07	2e-05	25.8	1.3	1	23	306	328	306	328	0.98

Sequence Information

Coding Sequence: ATGCAGAACAACCCCCAAGAGCTTTCATGGCAGGCGATTCAGGCTATTGTGGGGGTAAAGCTTTCCGTCGATGTTCTCCGATTCGATGACATCGGCTTCCATTTGATCAAAAATGCCGAACCGAATGTTATCGACTTAGATTCCGATATCGAAATTGTCGAGGACGAAAGCGATGGCGAACCATTTTCAGACATCAACGGAAACGGACAGAGTAGAACTTCCGAAGGTAGCACAATTCTCGACCAAACGGAATTGTGCAACGACGATGTCGAAAAATGCTCCGACGGCGGGGTGGACGTAGATTTTGATGAGAAACAAAATACATTGTCCTGTCCCACATGCAATTTAAGGTTTTTCTCAAAAAACGATTGGGCCAAGCACATGGAAAGTCAGTGCGACGATAACGATAATTCGGTCGATAACAATTTGTCAATAGATGATTATTTAGAAGTTACCCTATCCACTGATTCGGAAAATAGTCACAATTGTGGAAAATGCGACCAGACATTCTCAACAGAACAGGACCTATCTGCTCACACATGTATACCCAAAGTCACAGAAGGAAGGAAACACGGCTGTCACGTGTGCACCGAGAAATTCACTAGTTACTGGGAGCTTCGGAAACACATAAATACTCACTTCCCTGGGATGTTGGATTCTAAGTCAAGCTATTGTCATATATGCCAAAAAGATTATACCAAAACCGGTTTTATGAATCACCTTCGCAAGCATACTGGCGAGCGGCCTTTTGTGTGTGAACTTTGCAAGAAAGCTTTCTCTCAATCGAGCAGTCTCTCCATCCACATGAAGTTCCATCTCAATGTTCGCAAGCACGCCTGTACAGTGTGTGAAAAAAAGTTTGTGACCAAGAGCGAACTCTCACGCCACATGACAGTGCACACGAAGCAGAAGTCTTACTACTGCGGCGTGTGCGACAAGGCCTTCACTCGCTCTGACAACATgaagaaacatgaaaaaactcACGGTTAA
Protein Sequence: MQNNPQELSWQAIQAIVGVKLSVDVLRFDDIGFHLIKNAEPNVIDLDSDIEIVEDESDGEPFSDINGNGQSRTSEGSTILDQTELCNDDVEKCSDGGVDVDFDEKQNTLSCPTCNLRFFSKNDWAKHMESQCDDNDNSVDNNLSIDDYLEVTLSTDSENSHNCGKCDQTFSTEQDLSAHTCIPKVTEGRKHGCHVCTEKFTSYWELRKHINTHFPGMLDSKSSYCHICQKDYTKTGFMNHLRKHTGERPFVCELCKKAFSQSSSLSIHMKFHLNVRKHACTVCEKKFVTKSELSRHMTVHTKQKSYYCGVCDKAFTRSDNMKKHEKTHG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01012746;
90% Identity: iTF_00675416;
80% Identity: -