Basic Information

Insect: Odontocerum albicorne
Gene Symbol: -
Assembly: GCA_949825065.1
Location: OX463868.1:8807635-8836135[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.8 1.4e+02 4.2 3.7 1 23 220 243 220 243 0.93

2 12 2.4 1.9e+02 3.8 1.3 1 23 294 316 294 316 0.90

3 12 0.012 0.97 11.0 3.7 2 23 323 344 322 344 0.97

4 12 0.76 59 5.4 0.0 1 23 350 373 350 373 0.94

5 12 0.0018 0.14 13.7 0.4 1 23 379 402 379 402 0.95

6 12 5.5e-06 0.00043 21.6 0.6 1 23 408 430 408 430 0.98

7 12 6.8e-07 5.3e-05 24.4 1.2 1 23 436 459 436 459 0.96

8 12 0.037 2.9 9.5 0.4 1 23 467 489 467 489 0.95

9 12 0.00013 0.01 17.2 2.4 1 23 495 517 495 517 0.99

10 12 0.00045 0.035 15.6 2.0 1 23 523 545 523 545 0.97

11 12 0.0014 0.11 14.0 1.3 1 23 551 573 551 573 0.98

12 12 0.001 0.078 14.5 1.9 1 22 579 600 579 600 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.8	1.4e+02	4.2	3.7	1	23	220	243	220	243	0.93
2	12	2.4	1.9e+02	3.8	1.3	1	23	294	316	294	316	0.90
3	12	0.012	0.97	11.0	3.7	2	23	323	344	322	344	0.97
4	12	0.76	59	5.4	0.0	1	23	350	373	350	373	0.94
5	12	0.0018	0.14	13.7	0.4	1	23	379	402	379	402	0.95
6	12	5.5e-06	0.00043	21.6	0.6	1	23	408	430	408	430	0.98
7	12	6.8e-07	5.3e-05	24.4	1.2	1	23	436	459	436	459	0.96
8	12	0.037	2.9	9.5	0.4	1	23	467	489	467	489	0.95
9	12	0.00013	0.01	17.2	2.4	1	23	495	517	495	517	0.99
10	12	0.00045	0.035	15.6	2.0	1	23	523	545	523	545	0.97
11	12	0.0014	0.11	14.0	1.3	1	23	551	573	551	573	0.98
12	12	0.001	0.078	14.5	1.9	1	22	579	600	579	600	0.96

Sequence Information

Coding Sequence: ATGGAAATAGCTAAAAGTGAGAAATTAAAAGAGTTATGTAGAGCTTGTCTGTCAAGTTCTGAAGAAATGGAatctatttttacaatacacgAAGACTGCGTACCTTCCATCAAGGAAATGTTGGCCAGCTTCTGTGACATCAGCATTGAAGATAACATCATCTCTACACAGTTGATCTGCCGAGAATGCTCCACCGAGACGTTACGGGCCTATAACTTCAAATTAAAGTGCGAGCGTTCAGACCAAATACTTAGGGATAAATGCAAGGCTCTCAAATTAGATTACAAAGTGGTCATTCAAACAGATTTATCGAACTGTTTAAAACAAGAGGACCCCGATGACCCGGCCATAAAGTCCGAAAATGAATCTTCCACGAACCACGACGCTTTCATCCAGCGCACCATCAAGTGCGAACAGGACGAGGATTATCTCTCGGACGGGGGAATGGACAATGATGATTTCGATTACGAAGACGAAGTCAAGCCACTCAGATCGAAAGGTACGAGGAGAGAGCACAGATCCAGGCAGAAGGGTCTTCTCGAAAGGAAGTCCAAGAAAAAGAAGATTGAAgagaaatttaagaaaaagaaagttGAGAAATCGGACGATGACAAAGAAGAGGAGTCGATAATTGAAGAGAAAGGTTTGAAAAGAGTataTGAATGTCCGAAATGCCACgcctttataaaaacatttaacatgATGCATAAACACCTCGTGAAACTGCACCAGATCATCGTTGAATCGGCTAAGGAGTTCGACCAACTGTGGAGGTCACCAACTAACGTTACGAAGAAATCTGACCAGACTGATTTACGTGAAGATAAGTTATCGAACGAGGTGATCAACAAGGGTTTTGAGGAGACCAATAAGAATGGATTCAAGTGCCTAGACTGCCCGTACGTCCACAGAAGCTTTAAGACTGTCAAGGCGCACCTTGTGGAGCACCGCGGGGAGAGGCACATCTACTGCGACGAGTGTGAATACAAATGTACCCACCTGACGATGCTCGTGAGGCACAAACGCATCCACACTGGCGAGAGGCGCTTCCCGTGCGAGCTGTGCCCCTATCGTGCCCCCTCCAGCTTCCAGCTGGGCCTGCACGCGGCCACCGTGCACAGTGACCTCAAGCCCTTCGCCTGCGATACCTGCCCCTATACCTCCAAGACAAAGATCAGTTTGATGAACCACATAGCCCGCAAGCATGTGAACCGGCGGGAGCATACGTGTCCCACGTGCGGCAAGGGCTTTAACATGCCGCGAGATCTCAGGAACCACCTTGCCACGCACACTGGGGCTCGGCCGCACGTGTGCGAACACTGCGGGATGGGGTTCACACAGAAATCCAATCTGGAGAAACACGTGATGGTGGTTCACAAGGATACGGGCGAGCGTCCGTTCGCGTGCCCGCAGTGCCCGTACCGCGGCAAGACCGTCTACACACTCAAGTCGCACAGTGCCAAGCACTCGCCCATCAAGCCGTACCAGTGTGCCATGTGCGACCACCGCACCACCTCCAAGTTTGCTCTCAAAGTTCACATAAGGCGACACACAGGGGACAAGCGACACTCGTGCCCCACGTGTGCTTACAGCTGCTACGACTCGGAGACCCTGCGGGCACACATCCGGATACACACAGGGGAGCGGCCCTTCCCCTGCGCACTCTGCCCATACAGATCCAGGACGAAGCAGAGACTCAGGAACCACATGAAGAGCCACCTGAACGAGCAGCAGTTCTCCTGCCAGCACTGCTCCTACAGGTCCAACTACAAGTCCAATCTTATCGTGCACATCCGCAAGAACTGCGGCCGGGACACACGCCAGTACAGCGCCCGCAGAAGTGCGGCAGCAATCAACTTAAGCACACTTCCTCCCACCCTGACGCAGCATCTCGGTATCCTCAAGCCCGAGGAGCAGAACGCGCAGACAGACACCTTCGGCCAGGAGTGA
Protein Sequence: MEIAKSEKLKELCRACLSSSEEMESIFTIHEDCVPSIKEMLASFCDISIEDNIISTQLICRECSTETLRAYNFKLKCERSDQILRDKCKALKLDYKVVIQTDLSNCLKQEDPDDPAIKSENESSTNHDAFIQRTIKCEQDEDYLSDGGMDNDDFDYEDEVKPLRSKGTRREHRSRQKGLLERKSKKKKIEEKFKKKKVEKSDDDKEEESIIEEKGLKRVYECPKCHAFIKTFNMMHKHLVKLHQIIVESAKEFDQLWRSPTNVTKKSDQTDLREDKLSNEVINKGFEETNKNGFKCLDCPYVHRSFKTVKAHLVEHRGERHIYCDECEYKCTHLTMLVRHKRIHTGERRFPCELCPYRAPSSFQLGLHAATVHSDLKPFACDTCPYTSKTKISLMNHIARKHVNRREHTCPTCGKGFNMPRDLRNHLATHTGARPHVCEHCGMGFTQKSNLEKHVMVVHKDTGERPFACPQCPYRGKTVYTLKSHSAKHSPIKPYQCAMCDHRTTSKFALKVHIRRHTGDKRHSCPTCAYSCYDSETLRAHIRIHTGERPFPCALCPYRSRTKQRLRNHMKSHLNEQQFSCQHCSYRSNYKSNLIVHIRKNCGRDTRQYSARRSAAAINLSTLPPTLTQHLGILKPEEQNAQTDTFGQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -