Oalb032566.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- ZFY
- Assembly
- GCA_949825065.1
- Location
- OX463865.1:21669754-21671496[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.39 30 6.3 0.3 2 23 250 271 249 271 0.97 2 11 3.7e-05 0.0029 19.0 2.4 1 23 277 300 277 300 0.98 3 11 3.2e-05 0.0025 19.2 0.5 1 23 317 339 317 339 0.98 4 11 0.00027 0.021 16.2 0.7 2 23 346 367 345 368 0.95 5 11 1.9e-06 0.00015 23.0 2.6 1 23 374 396 374 396 0.97 6 11 1.4e-06 0.00011 23.5 0.3 1 23 402 425 402 425 0.97 7 11 5.8e-05 0.0045 18.4 0.2 2 23 432 454 432 454 0.96 8 11 0.44 34 6.1 1.6 2 23 461 479 461 479 0.89 9 11 0.0056 0.43 12.1 7.0 1 23 485 507 485 507 0.98 10 11 8.2 6.4e+02 2.1 1.9 1 23 514 539 514 539 0.84 11 11 8.8e-05 0.0069 17.8 0.6 1 23 545 568 545 568 0.95
Sequence Information
- Coding Sequence
- ATGACAgcaaatttcgatattttcgaAATTGTAAACGATATCCAATCCAAATGccgtatttgtttatttgaaaatgaaaacaaagaGTCCGCTTATGACTGTCAAGACATAAACGGTTACAGCGATTTAATAAAAGAGTATACGGGATTAGAATTGATACTCAACGACACCCTACCAGCTGGAATATGTAACGATTGTATAGCAGAATTAATGGTGGTCGTTAAATTCATATCCAAAGTAAgattttcaaatgaaaagtTCAGTAATGCAATCATTTGGGAGGTTCCTTTGCCTGCCGATGAGATAATGAAAAGCAATAATTCTGAAGAACTTGTTGAAACATTTGACGACGAAGTTCCTGAGGAATCATTTCTTAAATCGGAATATTCCGATGATGATATATCTGCTGAcaaatttttgattaaaaaagtcaaagaaaatgatgacaatattgaGGAAACCGAGGAAACTATTGTCCCTTTAGTTAAAAGTGAGAATGAAACACAATCGGTGAAGAAACGGAATGACATGCAAGAACATGCGAGAGAGTACGCTGAAAAGAGGAGGAAGACATCTAAAACTCACAAAAACAAACATTCACATAAGAAATGTGCCGTTGAAGTATCAGTTATAAAGAAAACCTCGgataatgttaaattaaaacagtttCATAAAAGTGATGATCTCGGAGAGCTGAATTATAAGATAATCAAGTTAGGCGAGAAgggacaaaagaaaaaaatgatgaaatgttTAATCTGCGGTGTTTTATCACAGAATCGTTCTGCTTTCATAGTTCACAATAGGAAGCACACCGGCGAGCGTCCTTACAAATGTCCTCTCTGCGTTAAATGCTTTACGCAGGTTGGCACTCTAAATACTCATAAACGGAGAGCGCACTCTAAAAGGAAAGAATCAAATGAAACCAAAGAAAAATGTATCGAGAGCTTTACGTGTGATTCCTGCGggaaaatgtacaatatacgATCTTCGCTTATCACTCATTTACGCGTACATAGAAAAGATAAACAATTACAGTGCTCGTATTGTCCGCAACGATTCGTACAAAGTGGCGAACGCTCGGTTCACATCCGAATACATCACACCGGAGAGAGACCTTACTTTTGCCATAAGTGTGGCAAATCATTTGCCGCAAGTACGAATCTAACAACACACATGCTGTCACATTCGGACGAacgaaaatttaaatgcaatatatgcGGCAAAGCTATGAAATCAAATGACAATCTCAAGAGGCATATTCTCGTAATGCACACACCGAATAAAAGAAATGTTTGCGAGATTTGCGGTGAGGCCTTCGCGTTGAAATACAAACTTAATCACCACATTAAAATATGGCACATCAACAAAAATTCGGGTGTGTGCGAAATTTGCAAGaaaaatttttataacatagaCAAACATATGAAAAGGCACACAAATGATAAACCGTTCCGTTGTGGGATGTGTCACAAGACATTCTTTCAAGAGAAACACCTTCTCGAACATTCCAAAAAGCACAGAAATGAGAATGCTACTTTTAAATGTACAATCGACGATTGTCCGTCGGCATTTTCTAAAAAATGCGTACTCGATtttcacataatgaaatatcACACAAAGAATACTCCGTACATTTGTCAATATTGTTCGAGAGGATTTTATAGAAAAGGAGATCTCGGAAGACATATGGTTTCGAATCACAAAATGAAACCGACTTCATCCATTTCTAATGAATCATAG
- Protein Sequence
- MTANFDIFEIVNDIQSKCRICLFENENKESAYDCQDINGYSDLIKEYTGLELILNDTLPAGICNDCIAELMVVVKFISKVRFSNEKFSNAIIWEVPLPADEIMKSNNSEELVETFDDEVPEESFLKSEYSDDDISADKFLIKKVKENDDNIEETEETIVPLVKSENETQSVKKRNDMQEHAREYAEKRRKTSKTHKNKHSHKKCAVEVSVIKKTSDNVKLKQFHKSDDLGELNYKIIKLGEKGQKKKMMKCLICGVLSQNRSAFIVHNRKHTGERPYKCPLCVKCFTQVGTLNTHKRRAHSKRKESNETKEKCIESFTCDSCGKMYNIRSSLITHLRVHRKDKQLQCSYCPQRFVQSGERSVHIRIHHTGERPYFCHKCGKSFAASTNLTTHMLSHSDERKFKCNICGKAMKSNDNLKRHILVMHTPNKRNVCEICGEAFALKYKLNHHIKIWHINKNSGVCEICKKNFYNIDKHMKRHTNDKPFRCGMCHKTFFQEKHLLEHSKKHRNENATFKCTIDDCPSAFSKKCVLDFHIMKYHTKNTPYICQYCSRGFYRKGDLGRHMVSNHKMKPTSSISNES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -