Oalb030775.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Odontocerum albicorne
Gene Symbol
-
Assembly
GCA_949825065.1
Location
OX463863.1:7441406-7443295[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.028 2.1 9.9 1.0 3 23 199 219 197 219 0.94
2 10 0.0041 0.32 12.5 4.7 1 21 246 266 246 267 0.95
3 10 0.44 34 6.2 0.0 3 23 276 296 274 296 0.94
4 10 0.0007 0.054 15.0 3.6 1 23 357 379 357 379 0.98
5 10 6e-05 0.0047 18.3 0.4 1 23 441 463 441 463 0.97
6 10 2.6e-06 0.00021 22.6 4.0 1 23 487 509 487 509 0.98
7 10 4.2e-05 0.0033 18.8 0.7 3 23 517 537 515 537 0.98
8 10 1.1e-05 0.00086 20.6 1.0 1 23 543 565 543 565 0.99
9 10 1.3e-06 9.8e-05 23.6 2.1 1 23 571 593 571 593 0.98
10 10 0.001 0.081 14.4 3.2 1 23 599 621 599 621 0.98

Sequence Information

Coding Sequence
ATGTCGACTCAAAATTTAGATTTGCAAGAGTCTAGTATTAAAAAAGATacttctacgagtataaagtcTATTGAATTGAATGGCAGTCAAGAAAAAGGGCAAAAGAAGTCTAAAGTCAAAAAGACCGGAAAACGTGATgggaaaaaatcaaattcaaaggAACCGAAAAAGACTgcaaaatcgaaaaataaagACGGGAAAAAGTCAACCGAAAAAGGTGTTAAGAAGTCTgaattgaaaaaagaaacaaaaaggaaaaaaaataaactgacaaTTCAAACTAATGTGTCTGAAACAACGTCACCTGTTAAAACTACATCATCTGTTAAAACGACGCCACCTGTTAAAACGACGCCACCTGTTAAAACGACAGCATCTGTTAAAACGACGTCATCTGTTAAAACGACGGCATCTGTTAAAACGACAGCATCTGTTAAAACGACGGCATCTGTTAAAATGACGGCATCTGTTAAAACGACAccgaaattaaagaaaaaaaagactgATAAAAATGAATCGGAAAAGGATAGTACACATGTTGGTAGTGATGGAGTACtgaaaaaaaggagaaaatataGAGAAAAAACGTTATTCTGTAGTGTATGTAAAAAAGCGTACTCTTCTGAAATCCGATTGCAACATCACGAACAGGcacatttgattaaaaatggtGTTGATACTAAGTCCGAAAGCGCTCAGAAAAACGGTCAAGCTGTCATCACGGATGATCAACCGTTTTACTGTACGTTTTGTAATCTATGCTTTACTAATGAAGACGAACTCAACACGCATCTATGTAACCGTGGAGACGCTGATCAATTATTTTGCGTCTTATGCGGGGAAGCATTTTTATCTGAAGAGCTTCTGAAAGATCACGAACTATCTCACGATCCTAACGAATTCAATATTAAAGACGAAATGGCAGAACAAAATCTCGGAATAGAATATTCCGACTATGGTGATAGTGAAGGAATGATGTATCAACAAAATTTGATGGATTCAAGCGAGACTGGATTGCAGGACGATAGTACGAGCGGAAGCGGAAACGAAAGCAACTGCAACGAAATTTATTACTGCGTAATGTGCAATGCGAAATTTTCTAAAGAGAGACACTTGCGAAGTCACGAACGCACTCACAACGAAGAGATTTATTTCgaaaatcaaataattgaaCCCGTTAATGTCATCGAGGACGAGAATGATTTTCAACAAGATAAAACAACCATTCTCGAAATACGACAATTGAACGGCAACAACGAATCGTGTCAATCATTTTTTATAGAAGAGAAGACGACTACGGTGAAAAATTTCGatttcacatttgattgttcaacGTGCGGTACGAGATTCTCCGAAGAAGCGCAGTTGCGGAATCACGAACGAATCCACGGAAAGGATTCTGTCATCGAAGTAGAACCGTTGATTAAAAAGATACCGCGAAAACGTGGAATGAAGACGTTCAACTGTCCTATATGCTCAAAGGCCTTCAATCAAAAGCATCATCTTAAAAGTCACGtaaggattcatactggagagcgTCCGTTTGGGTGTGACGTATGTGGGAAGCATTTCGCACGTGAGGATAATTTAAAAGGTCACTCTCGAGTACACACCGGTTTTAAACCTTATCGATGTGACATTTGTGGAGGTATCTTCGCTCATTCATCGTCACTGAAGGACCATAAAAGGTCACACACCGGCGAGAAGCCTTATTCGTGTCCTCAATGTGGAAAGCTATTTTCGCAGGCGTCTCATTTACGTGATCACAAGAAGATGCACGCGGGACAGATGCCGTTTTCTTGTCCTATTTGCCAGAGGCCGTTCTTGAAACAGTTTTATTTGCAGCACCACCTTaagacgcacaagaggaaggaTAAGAAAAAGAAGTAA
Protein Sequence
MSTQNLDLQESSIKKDTSTSIKSIELNGSQEKGQKKSKVKKTGKRDGKKSNSKEPKKTAKSKNKDGKKSTEKGVKKSELKKETKRKKNKLTIQTNVSETTSPVKTTSSVKTTPPVKTTPPVKTTASVKTTSSVKTTASVKTTASVKTTASVKMTASVKTTPKLKKKKTDKNESEKDSTHVGSDGVLKKRRKYREKTLFCSVCKKAYSSEIRLQHHEQAHLIKNGVDTKSESAQKNGQAVITDDQPFYCTFCNLCFTNEDELNTHLCNRGDADQLFCVLCGEAFLSEELLKDHELSHDPNEFNIKDEMAEQNLGIEYSDYGDSEGMMYQQNLMDSSETGLQDDSTSGSGNESNCNEIYYCVMCNAKFSKERHLRSHERTHNEEIYFENQIIEPVNVIEDENDFQQDKTTILEIRQLNGNNESCQSFFIEEKTTTVKNFDFTFDCSTCGTRFSEEAQLRNHERIHGKDSVIEVEPLIKKIPRKRGMKTFNCPICSKAFNQKHHLKSHVRIHTGERPFGCDVCGKHFAREDNLKGHSRVHTGFKPYRCDICGGIFAHSSSLKDHKRSHTGEKPYSCPQCGKLFSQASHLRDHKKMHAGQMPFSCPICQRPFLKQFYLQHHLKTHKRKDKKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-