Oalb034508.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Odontocerum albicorne
Gene Symbol
-
Assembly
GCA_949825065.1
Location
OX463868.1:10984202-10987015[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.01 0.8 11.3 3.0 1 23 82 104 82 104 0.99
2 15 0.0012 0.09 14.3 2.1 1 23 110 132 110 132 0.96
3 15 0.00034 0.026 16.0 1.2 1 23 138 160 138 160 0.93
4 15 2.9e-05 0.0023 19.3 2.7 1 23 187 209 187 209 0.95
5 15 0.0029 0.23 13.0 0.6 1 23 251 273 251 273 0.99
6 15 0.0062 0.48 12.0 3.6 1 23 279 301 279 301 0.97
7 15 0.025 2 10.1 3.1 1 23 411 433 411 433 0.96
8 15 0.00013 0.01 17.2 1.4 1 23 439 461 439 461 0.97
9 15 1.3e-06 0.0001 23.5 2.3 1 23 467 489 467 489 0.95
10 15 0.0073 0.57 11.7 0.2 1 23 775 797 775 797 0.97
11 15 0.00077 0.06 14.8 1.3 1 23 803 825 803 825 0.97
12 15 1.7e-05 0.0013 20.0 3.7 1 23 831 853 831 853 0.98
13 15 0.00067 0.052 15.0 3.0 1 23 862 884 862 884 0.97
14 15 0.005 0.39 12.3 3.8 1 23 893 915 893 915 0.98
15 15 0.71 55 5.5 0.1 1 10 921 930 921 936 0.92

Sequence Information

Coding Sequence
ATGGATTCTTTAAATGAGAACCTTAACGGTGATATTAAAGAAGAGAATTCTGTGATATCAAATAGAAGGCACTCAAATGGGACAGTCTTAATGAAAAATGAACGTCAAGACAACACAAATGGTATTCGAGATAACTGTAAAAACTATACATCGTTCGGCAGCGATACAATAACACCGAAATCATGTTCAAAAgaaaacaacttaaaaaataaaagttcaaaCAAAAAACAGTGTGGAAGATTATTCAAATGTACGGAATGTAACTTCGAAACATCGAAAATTAGACAATTTAATGTTCATAGGCGTACGCACGAACCGACAAGACCGCATACGTGTGAGATTTGCAAGAAAAGCTTCGCTAAACTCAGCGTGATGAAGAGACATAGATTAGGTCACGATACAACTAAAGCATATCTCTGTGACCTTTGTGGTCGTTCATTTTCGCAACCGATGAGTCTAAAGTATCATAAATTCAACCAtcttaaagataatttaaataaaagtagtaAAAAGGACGAAACGAACGTAATTTCAGACGATAGTGTTCCTTTGAAACGATTTTTGTGCGATATGTGCGGAAAATGCTTTTCGCAAGCTATATCTTTAAAAGTACATAAGAAAAAGCATACAAACGTTGCTAACGAATctattaaatctgaaaaaagtGTTAAAGATGGAAAGGGTGTGTTGCGAACAAATACTTTCaatgaacaacatttaaaaaataaatgttacgaACAGAGAAAATCGTTCAAATGTAGCGAGTGTTCTTACACTGCAGTACGTTCACGTgatgtttatatacatatacgtaCGCATCTTGGTCATAATGCTTTTCCTTGTAACATGTGcgataaacagtttttgaagAGATGCCTTTTGAAGAGGCATATGGATTCACATTCAAATGGAAATGTAGCAAATGAGGAGATTAAACGAGATTCGaaacgaaataataatttacgtgATAAAAAAGATGTTTATCGAGATTTCAGTGAAAGAGTCTcaaatattgattcaaatttCTGTATAAGAGAAGATAGtgcaatagaaaagtttgaacaACTTCAGCGAATGGATAGTACGGTCCGAAATAGTGATGAAGTTTTGTTTAGTTCGCTTAATAAGCAACCTCGCGTATTAAAAATCGAATACCCTAAAAAGAGACGAACAAAAGAGGAAACGGATCGAACGAAAGAACGTGAACGAAAGCCTCgtatcaaaaataaacatttctgcGATCAATGTCCATATTCAACGAAGGCTTCTCGAGATCTGAAGGTACACAAACGTAAGCATACGGGCGAGAAGCCCTTCCCTTGCGGAGTATGCGGAAAATTCTTCTCGAACCGTCACGTCGTTAAACGTCATCAATCTGTGCATACGGGAATCAAGGCGCACTTTTGTGAAATATGCGGAAAGTCATTTTCACAAGCGAGCAACTTGAAATCACACAAGTTGAATCACTTTGATGAGAACACGGGACTACCGCGCGAACGGAATCGAAAATTCTGCAAGATGAAAGTAATTAATGAAAAGGAAGATATAAAACATGACGaagaatttattattgatatcaatAATGATGCTTCGAAAGCAAACGAAGCTTTTGAAGATAACATAGATATTAAAATAGAAGACAATAAAGAAGAGAAATATTTGACGGGTGACGTTATTGCTAATGTTGACCGTAATAAGGATACAGTATTAAAGAggtttaagtataaaaaagtaaagaaaaagattaagagaaataaaagtgataaaaagcATAAAAAAGTGAACGAAATGATTGATGTGAACGATAATTATAATTCTTCTGATGACGATGTATTGGGTAGATTGAGAGAGGAATTGATAAAGAAAAGATGTAAAGTTGATGACTTACAGTTGACGGAACAAGTTGAATTTCATGATTCTGATgtcaattttttcataaaagaagaCATAAGAGGTATTAAAAGAGAAAATGAAGTTGATATTGAATATGGGAATGATTCGGAAGAATTTGAAGATGAATATCAAATGAACGATAACATAGAACGAATCATCCGACCGAATGGCGAAAATGTATATAAGTCTAAAGAAAAAATAgacaataatttgtttaattatattcaatCAAACGACGAACAACCGAACGACATCCAAGAACAAGAAGTCAAAGTGAAGagattaaagaaatataagCTCAAAGAAAAAGGCGAAATCAAAAGCTACCAGTCGAACGATAATCATCTGAATAGTCAACTAGAATTGGTACAAGACAgcaaaatgatgaaaaaaaggGGACGAAAACCTAAAGAAAACGCACCCACATCGTTCGATTGCGCCAAATGTAGTTACGTAGCGTCGAATAAACGCGGGCTAGCAGTTCACATGACTACGCATACGAAAGAAAAGAATTATGCCTGCGAGATTTGCGGGCAACGTTTCTCTAAACAGCACGTCGTCAAACGGCACAAACTCGTGCATACGGGCGAGAAAAAATTCACTTGTCACTATTGTGGAAAACTGTTTACGCAGTCGAACGGACTAAAGACGCATCTTTTGAAACATATGGATAGTAAACCTCAGTTGCAGTTTGTATGCGATCACTGCGGAGATTCGTTCGCCCAAGAGACGAGCCTTAAGAAGCATAGACACGTTCATAGGCGAGATAAGTCGTCGACTCGGTACTCGTGCCACTTTTGTGGCAAGGTGTTTGCGTACGACTGCCGATTAAAGGAACATTTGATCATGCATACGGGAGAAAAGAGATTTTCATGTGATATATGTAACAAAATGTTCCTACGACTTAAAGATatgaggtaa
Protein Sequence
MDSLNENLNGDIKEENSVISNRRHSNGTVLMKNERQDNTNGIRDNCKNYTSFGSDTITPKSCSKENNLKNKSSNKKQCGRLFKCTECNFETSKIRQFNVHRRTHEPTRPHTCEICKKSFAKLSVMKRHRLGHDTTKAYLCDLCGRSFSQPMSLKYHKFNHLKDNLNKSSKKDETNVISDDSVPLKRFLCDMCGKCFSQAISLKVHKKKHTNVANESIKSEKSVKDGKGVLRTNTFNEQHLKNKCYEQRKSFKCSECSYTAVRSRDVYIHIRTHLGHNAFPCNMCDKQFLKRCLLKRHMDSHSNGNVANEEIKRDSKRNNNLRDKKDVYRDFSERVSNIDSNFCIREDSAIEKFEQLQRMDSTVRNSDEVLFSSLNKQPRVLKIEYPKKRRTKEETDRTKERERKPRIKNKHFCDQCPYSTKASRDLKVHKRKHTGEKPFPCGVCGKFFSNRHVVKRHQSVHTGIKAHFCEICGKSFSQASNLKSHKLNHFDENTGLPRERNRKFCKMKVINEKEDIKHDEEFIIDINNDASKANEAFEDNIDIKIEDNKEEKYLTGDVIANVDRNKDTVLKRFKYKKVKKKIKRNKSDKKHKKVNEMIDVNDNYNSSDDDVLGRLREELIKKRCKVDDLQLTEQVEFHDSDVNFFIKEDIRGIKRENEVDIEYGNDSEEFEDEYQMNDNIERIIRPNGENVYKSKEKIDNNLFNYIQSNDEQPNDIQEQEVKVKRLKKYKLKEKGEIKSYQSNDNHLNSQLELVQDSKMMKKRGRKPKENAPTSFDCAKCSYVASNKRGLAVHMTTHTKEKNYACEICGQRFSKQHVVKRHKLVHTGEKKFTCHYCGKLFTQSNGLKTHLLKHMDSKPQLQFVCDHCGDSFAQETSLKKHRHVHRRDKSSTRYSCHFCGKVFAYDCRLKEHLIMHTGEKRFSCDICNKMFLRLKDMR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-