Basic Information

Insect: Odontocerum albicorne
Gene Symbol: -
Assembly: GCA_949825065.1
Location: OX463863.1:22462755-22470670[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.4e-05 0.0026 19.1 1.5 1 23 143 165 143 165 0.99

2 13 2.6e-05 0.002 19.4 0.5 1 23 170 192 170 192 0.97

3 13 9.6e-05 0.0074 17.7 2.4 1 23 197 219 197 219 0.98

4 13 3.1e-05 0.0024 19.2 1.1 1 23 225 247 225 247 0.97

5 13 8.7e-06 0.00068 20.9 1.9 2 23 254 275 253 275 0.97

6 13 6.4e-06 0.0005 21.4 0.8 1 23 281 303 281 303 0.98

7 13 3.4e-06 0.00026 22.2 0.2 3 23 311 331 310 331 0.99

8 13 9.2e-06 0.00072 20.9 1.9 3 23 339 359 337 359 0.98

9 13 2.4e-06 0.00018 22.7 3.8 2 23 366 387 365 387 0.98

10 13 4.6e-06 0.00036 21.8 4.2 1 23 393 415 393 415 0.98

11 13 6.3e-06 0.00049 21.4 0.2 1 23 421 443 421 443 0.97

12 13 1.2e-06 9.4e-05 23.6 1.8 1 23 449 471 449 471 0.98

13 13 1.1e-05 0.00085 20.6 0.8 2 23 478 500 477 500 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.4e-05	0.0026	19.1	1.5	1	23	143	165	143	165	0.99
2	13	2.6e-05	0.002	19.4	0.5	1	23	170	192	170	192	0.97
3	13	9.6e-05	0.0074	17.7	2.4	1	23	197	219	197	219	0.98
4	13	3.1e-05	0.0024	19.2	1.1	1	23	225	247	225	247	0.97
5	13	8.7e-06	0.00068	20.9	1.9	2	23	254	275	253	275	0.97
6	13	6.4e-06	0.0005	21.4	0.8	1	23	281	303	281	303	0.98
7	13	3.4e-06	0.00026	22.2	0.2	3	23	311	331	310	331	0.99
8	13	9.2e-06	0.00072	20.9	1.9	3	23	339	359	337	359	0.98
9	13	2.4e-06	0.00018	22.7	3.8	2	23	366	387	365	387	0.98
10	13	4.6e-06	0.00036	21.8	4.2	1	23	393	415	393	415	0.98
11	13	6.3e-06	0.00049	21.4	0.2	1	23	421	443	421	443	0.97
12	13	1.2e-06	9.4e-05	23.6	1.8	1	23	449	471	449	471	0.98
13	13	1.1e-05	0.00085	20.6	0.8	2	23	478	500	477	500	0.95

Sequence Information

Coding Sequence: ATGGAGGAGTACCCTTGTTTGAGTAATACTTGTTTCATCAAGACTGAGGTAAACGAAAATGCTTACGCCGAAGTGGCGATCAAGCAGGAACCTTGGGATCCGGAAGATGGAAGCGGCGAAGAGTGCTCTGCTGGTCTCTCGGCTGCTGAACCTGGGGTGACAAGAAATGAGGAAAAACACGACCTCGCAGCTGCGGTGAAGGAGGAACCACGAGATTATGaagttcaaattataaaaatggagcAAACCTTTTCACAATCTGATGATGATGCTACTAGCAAAGGCTTTCAGGGAGATACGGCAGTCGACATATTCATTCCGGAGACTAAATTAGAATGTGAACCAAAGGTGGAAGTGGAACCGGTTGAAAGGGTCTCGGCGAAGAAAGGTTCCAAAAACAAAGCTcgcgaaagaaaaaaaagaacgtACAGATGCGACCAGTGTGACGAAACGTTCACGCATTTGATTCCTCTTAGAACGCATTTAATGACTCATCCGAGTGGACAGCATATTTGCCAACAGTGTGGCATAGTGACAACATCGGCgaaaaatttagaaaaacacGTTCGTATACATTTAAAACCTTTACATAAGTGCGTTATATGCGATAGAACATTCACGTTGAAGAATAACTACGAAATGCATTTGAAAGTgcatcaagaaaagaaaatgttCGACTGCGAGACGTGCGGTCAATCGTTCCCGTACATAAGTCATTTAAGAGAGCATCAAATCAAACATTCCTCGGAGAAGAATCTCAAATGCGACATATGCGATAAACAGTTTGGGCGCGCGAGCCATTTGAAGGTTCATAAATTAAAGCATTCCGGGAACCGTGCGTTTCCCTGTACGGAATGCGATAAATCATTCTTTATGCCTTTCGAGCTCAAGGTCCATCAGCGGCAGCACAACGGGGAGCGCCCGCACGGATGCGGGGACTGCGGGCTGAGCTTTGCGTCTCGCAGCACGCTCAATGCGCACCTGCGCTCTCACGCCGGGGAGAGGAACTTTGGGTGTGAGATTTGCGGGAAGAAATTTTTCCATAAAGGGAACTTGACGATGCATATCTACACTCATACTAAGGAGAAGatgcaaaaATGTGACGAATGTGGTAAGACCTTCTCCATGTCCACTCATCTGAAGGCTCACAAGCGCCGACACACCGGAGAGCGCCCGTTCCAATGCACCGAATGCCTCAAGACCTTCACGGACACGCACAGTCTAAAGCGACACATGCTCTCCCACTCAGACGAGAAGCCGCACATCTGCGGGATCTGCGAGAAAGGCTTCGCTACGCCCGGCACCCTTAAGCTCCATATCCGTATGCACGCCGGAGAGAAAAACTACCAGTGCGACGAGTGTGAGAAGTCCTTCTACCGGTCGTACAACCTTAAGATGCATAAGCTTGTACACTCGGGAGAGAAGCGATTAGAGTGCGACCAGTGCGGGCGCGCCTTCTCTAGGCCGAGATATTTGTCTAAGCACAAACAAAAAATGCACCCATAa
Protein Sequence: MEEYPCLSNTCFIKTEVNENAYAEVAIKQEPWDPEDGSGEECSAGLSAAEPGVTRNEEKHDLAAAVKEEPRDYEVQIIKMEQTFSQSDDDATSKGFQGDTAVDIFIPETKLECEPKVEVEPVERVSAKKGSKNKARERKKRTYRCDQCDETFTHLIPLRTHLMTHPSGQHICQQCGIVTTSAKNLEKHVRIHLKPLHKCVICDRTFTLKNNYEMHLKVHQEKKMFDCETCGQSFPYISHLREHQIKHSSEKNLKCDICDKQFGRASHLKVHKLKHSGNRAFPCTECDKSFFMPFELKVHQRQHNGERPHGCGDCGLSFASRSTLNAHLRSHAGERNFGCEICGKKFFHKGNLTMHIYTHTKEKMQKCDECGKTFSMSTHLKAHKRRHTGERPFQCTECLKTFTDTHSLKRHMLSHSDEKPHICGICEKGFATPGTLKLHIRMHAGEKNYQCDECEKSFYRSYNLKMHKLVHSGEKRLECDQCGRAFSRPRYLSKHKQKMHP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -