Basic Information

Insect: Odontocerum albicorne
Gene Symbol: -
Assembly: GCA_949825065.1
Location: OX463868.1:13604968-13620571[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0001 0.0078 17.6 5.8 1 23 206 228 206 228 0.97

2 15 0.00038 0.03 15.8 3.3 3 23 235 255 234 255 0.99

3 15 0.00062 0.048 15.1 3.2 1 23 261 283 261 283 0.98

4 15 0.00024 0.018 16.4 0.4 1 23 289 311 289 311 0.97

5 15 1.2e-06 9.3e-05 23.7 0.8 2 23 315 336 314 336 0.98

6 15 2.4e-06 0.00018 22.7 1.7 2 23 343 365 342 365 0.93

7 15 1e-05 0.00081 20.7 1.5 1 23 371 393 371 393 0.98

8 15 5.5e-07 4.3e-05 24.7 0.3 1 23 399 421 399 421 0.98

9 15 2.8e-05 0.0022 19.4 0.1 1 23 427 449 427 449 0.98

10 15 0.00091 0.071 14.6 0.7 1 23 455 477 455 477 0.98

11 15 1.8e-06 0.00014 23.1 3.9 1 23 483 505 483 505 0.97

12 15 8.7e-07 6.7e-05 24.1 0.4 1 23 511 534 511 534 0.95

13 15 0.00039 0.03 15.8 2.7 1 23 540 562 540 562 0.97

14 15 2.2e-06 0.00017 22.8 1.7 1 23 568 590 568 590 0.98

15 15 0.0039 0.3 12.6 2.9 3 23 625 645 623 645 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0001	0.0078	17.6	5.8	1	23	206	228	206	228	0.97
2	15	0.00038	0.03	15.8	3.3	3	23	235	255	234	255	0.99
3	15	0.00062	0.048	15.1	3.2	1	23	261	283	261	283	0.98
4	15	0.00024	0.018	16.4	0.4	1	23	289	311	289	311	0.97
5	15	1.2e-06	9.3e-05	23.7	0.8	2	23	315	336	314	336	0.98
6	15	2.4e-06	0.00018	22.7	1.7	2	23	343	365	342	365	0.93
7	15	1e-05	0.00081	20.7	1.5	1	23	371	393	371	393	0.98
8	15	5.5e-07	4.3e-05	24.7	0.3	1	23	399	421	399	421	0.98
9	15	2.8e-05	0.0022	19.4	0.1	1	23	427	449	427	449	0.98
10	15	0.00091	0.071	14.6	0.7	1	23	455	477	455	477	0.98
11	15	1.8e-06	0.00014	23.1	3.9	1	23	483	505	483	505	0.97
12	15	8.7e-07	6.7e-05	24.1	0.4	1	23	511	534	511	534	0.95
13	15	0.00039	0.03	15.8	2.7	1	23	540	562	540	562	0.97
14	15	2.2e-06	0.00017	22.8	1.7	1	23	568	590	568	590	0.98
15	15	0.0039	0.3	12.6	2.9	3	23	625	645	623	645	0.96

Sequence Information

Coding Sequence: ATGTATTTCCAGCTAAGTGTCTCGCTGAGCAGCTGGGCTTGCTACCGCTGCGCCAACACCATGGATAGGCTGTCTAGGTTCAGGGATCTCTGCACCAGAGCTGATGGCACGCTCAGGGAGTTCTCTGCCAAGTATTCCTACTTAAACAAGATGTTGGATTTAAACGAAAGCACGTATGATGCGATGATAAGCGAATTTGAAACTCAGACAAACGTACTACCGAATAAAATCGTAGATTTAAGATTGAGAACTGAAATAGCGAACAGTGTTGAACCGAGCAAAGGGAAGGAAGAAATACGTGACAAAGctgATTATATGAAAGAATTCACTTGCACGTACACCTGCAGATTGTGTGAATTGCCTTTCGGAACTATTATTGCTCTACCGAACCATCACAAGTTCTGTAAAGGAAGACGCTGGACAAACATAATTAACAAGAGACTAGAAACTACGAACAGGGATAAATCACATAACAAAATGACAACACCCGAAAAGATAACACTCGAAAGCAAACAGAAGGTTGACGAACGCAGCTTACAGCAATCGGAAAGAGATTCCATTACGAGGGAGATAAGCTCAATAAATaagacaaattttaataaagaattaattgattataaatGTTGCTATTGCGAAAAAACCTTTACGAATCAGAGCTTATTcgaaaaacacaatttatcaCATTCGAATAATAATCACGGCTGTAAAATTTGCGGCGAGACTTTCCAACATTCGCTACATCTCGAAAAACATACGAAAGTGCACGTCGATCCGATATCGCACGTTTGCACAGATTGCGACGCATCCTTTTCGTGTCTTTCTGAATTGAAGAGCCACCAGATGACGCACGCTGATGGCAGGATTCACTCTTGCGCCGTGTGCAGGGTTTCTTTCGTCACGAGATCTGCGTTGAGTTTACATATGGCAACGCACACGGGATCTAAATGTGAGATATgtaaatatgtatttaaaaatgaggACCAACTCACACAACACATGCTGACACATCGTAAACGTGGCCCATTGAATTGTAACATTTGCCACAAGGTCTTTTCAAAGCCAAGCAACCTGAAGAAGCACAATGCCACCGTTCATTCTGACCTGCGTCCGTTTTCGTGCGAAAAGTGTGGTAAAACTTTCAAACTGGACACGCTGCTCAAATCTCACATGAAGGTGCACTCGAACGGGCAAGGTTATGTCTGCGAAGAATGCGGAGTCACATTCCGGAGTCCGTATAACCTCAAAGTCCACAAGATGAGACACAGTGACGAACGCCCATTCCCTTGCAGTGTTTGCGCTAAAGCGTTCAGATCTGCCGGAAGTTTGAAGCTCCACCAAATGGTGCACAGTGGATTGAAAGAGTTCAAATGCGAAGTCTGCGGTCTCGGATTGAGGAACAAGTTTCTTCTTAAAGAACACTTTAGACTTCATAGCGGGGAAAAGCCGTTCTGTTGCCAAGACTGCGGGAAAACATTCAGGAGAAAGGTCCTGCTCAAAGTTCATAAGAGGATTCACACAGGTGAAAAACCATTTGATTGTAAGGAGTGTGGCAAAAAGTTTGTCTCATGGAGCGATCTGAATATCCACAAGCGAGCGACACACAGCGGAGAGAGACCCCATCCGTGCACCGTATGCGGGCGCTCCTTCCTTCGCCGCAGTTGTCTGGTAATCCACTGGCGCACCCACACCGGAGAGCGACCCTTCTCGTGTGACTATTGCAGCAAATCCTTCTCTGTCTCCAGCAATATGAAGATCCACCGGCGAATACATACAGGAGAGACATTTCCCTGTGACCTGTGCAGTTACCAGGGACTGAGTAGAAGCAGGGTACGGACACATCGACTCAGTCATACTGGCGAGCGCCCTTTAGCCTGTTCCGTGTGTTCGTACAGGACCACGACACATAAACAACTTAAAAGACATACGGCGACCCACAACAAAACTAcattttactaa
Protein Sequence: MYFQLSVSLSSWACYRCANTMDRLSRFRDLCTRADGTLREFSAKYSYLNKMLDLNESTYDAMISEFETQTNVLPNKIVDLRLRTEIANSVEPSKGKEEIRDKADYMKEFTCTYTCRLCELPFGTIIALPNHHKFCKGRRWTNIINKRLETTNRDKSHNKMTTPEKITLESKQKVDERSLQQSERDSITREISSINKTNFNKELIDYKCCYCEKTFTNQSLFEKHNLSHSNNNHGCKICGETFQHSLHLEKHTKVHVDPISHVCTDCDASFSCLSELKSHQMTHADGRIHSCAVCRVSFVTRSALSLHMATHTGSKCEICKYVFKNEDQLTQHMLTHRKRGPLNCNICHKVFSKPSNLKKHNATVHSDLRPFSCEKCGKTFKLDTLLKSHMKVHSNGQGYVCEECGVTFRSPYNLKVHKMRHSDERPFPCSVCAKAFRSAGSLKLHQMVHSGLKEFKCEVCGLGLRNKFLLKEHFRLHSGEKPFCCQDCGKTFRRKVLLKVHKRIHTGEKPFDCKECGKKFVSWSDLNIHKRATHSGERPHPCTVCGRSFLRRSCLVIHWRTHTGERPFSCDYCSKSFSVSSNMKIHRRIHTGETFPCDLCSYQGLSRSRVRTHRLSHTGERPLACSVCSYRTTTHKQLKRHTATHNKTTFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -