Basic Information

Insect: Odontocerum albicorne
Gene Symbol: -
Assembly: GCA_949825065.1
Location: OX463863.1:21713200-21718338[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.1e-05 0.00084 20.7 0.4 1 23 123 145 123 145 0.95

2 15 7.1e-06 0.00055 21.2 0.5 1 23 151 173 151 173 0.98

3 15 7.7e-06 0.0006 21.1 0.4 1 23 179 201 179 201 0.95

4 15 3.7e-05 0.0029 19.0 1.1 1 23 210 232 210 232 0.97

5 15 2.6e-06 0.0002 22.6 4.0 1 23 238 260 238 260 0.98

6 15 2.3e-06 0.00018 22.7 2.1 1 23 266 288 266 288 0.97

7 15 0.0013 0.1 14.1 1.6 1 23 292 314 292 314 0.94

8 15 1.6e-05 0.0012 20.1 1.2 1 23 320 342 320 342 0.98

9 15 8.9e-06 0.00069 20.9 0.6 1 23 348 370 348 370 0.97

10 15 1.4e-06 0.00011 23.5 1.1 1 23 375 397 375 397 0.98

11 15 1.7e-05 0.0014 20.0 1.5 3 23 405 425 403 425 0.98

12 15 3.4e-08 2.6e-06 28.5 0.4 1 23 431 453 431 453 0.99

13 15 4.7e-05 0.0036 18.6 0.6 1 23 459 481 459 481 0.98

14 15 0.00017 0.014 16.9 0.8 1 23 487 509 487 509 0.98

15 15 0.00096 0.074 14.5 8.6 1 23 514 536 514 536 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.1e-05	0.00084	20.7	0.4	1	23	123	145	123	145	0.95
2	15	7.1e-06	0.00055	21.2	0.5	1	23	151	173	151	173	0.98
3	15	7.7e-06	0.0006	21.1	0.4	1	23	179	201	179	201	0.95
4	15	3.7e-05	0.0029	19.0	1.1	1	23	210	232	210	232	0.97
5	15	2.6e-06	0.0002	22.6	4.0	1	23	238	260	238	260	0.98
6	15	2.3e-06	0.00018	22.7	2.1	1	23	266	288	266	288	0.97
7	15	0.0013	0.1	14.1	1.6	1	23	292	314	292	314	0.94
8	15	1.6e-05	0.0012	20.1	1.2	1	23	320	342	320	342	0.98
9	15	8.9e-06	0.00069	20.9	0.6	1	23	348	370	348	370	0.97
10	15	1.4e-06	0.00011	23.5	1.1	1	23	375	397	375	397	0.98
11	15	1.7e-05	0.0014	20.0	1.5	3	23	405	425	403	425	0.98
12	15	3.4e-08	2.6e-06	28.5	0.4	1	23	431	453	431	453	0.99
13	15	4.7e-05	0.0036	18.6	0.6	1	23	459	481	459	481	0.98
14	15	0.00017	0.014	16.9	0.8	1	23	487	509	487	509	0.98
15	15	0.00096	0.074	14.5	8.6	1	23	514	536	514	536	0.98

Sequence Information

Coding Sequence: ATGGAATTTCCAAGTGGAAATATTGATAAGACTTGGGACGTCGAAGTGATTGTCAAAACGGAAACTATCGACCAAAGCGAGGAAAGCGATGCGGAAGACACTCCATACGAGGCGGAACCGCTGGTGGGAGGAACACAAAGAGAGCGTGGACAGGGGAACAGTGTTGCAGGTGTAATGGCCAGAGACGACGCGGAAGGAGCGAATTTGTTCTATCTAAATCTTCCCAACGAAATCGGACTGCAAAACAAAGATTATtgtaaagaaaaaagttatcagAATTCTGGATACCGATTTGAAGACAAAACTTTACTTGTTAAAAAGGGAACGCGCTGTAGGAGTAACAAACGCAACAATGTTAAGAAGCCTCACGTTTGTGGAGATTGCGGTAAAGCATTCAAAATAAGAAGCCAATTGGAGCGGCACTCGATCGTCCACACCCGAGAGAAACCATTCAGCTGCGACCAGTGCGGTAAACTGTTTACCCGCAACACCTCATTGGCAGACCATATGACTATTCATCGGGGAGACAAGCACCACGCGTGCCGAGAGTGCGGAGCGGCTTTCAACAGAAAGGGGAACTTGACGAAACATTTAGAAATACACACGAGAAAGAACAGCACAGAATCGTTCAAATGCGAAACATGTcagaaaatattcattcaaaagaGTTCTTATGACAGACATATTATACTTCACAGCGGGACTTATGTGTTTCACTGTGAACACTGCGGGAAAGGGTTCAATAATAAgagtaattatttaattcatttgagGATCCATACTGGAGAGACGCCGTTCAGTTGTCGGCATTGCGATAAAAGTTTTAAAGACAAGGGTACTTTAAAAATACACTTGGCAATCCATGACGGACCATTTATCTGCGCTGAATGTGACAAGTCGTTTATGCATAAGAAGAATTTGATGTTTCATTTGATGGCGCACAGTGGTAGATATCTTTTCCATTGCCCGGTGTGCAGTAAAGGATTCAATTCGCAGAGCGGTTTGAAGGAACATTCCAGAGTTCACACTGGAGAGAAACCGTTTGCATGTACCGAATGTCCTAAGACATTCACTAAAAAGAAATCATTGGGAGTTCATTTGAAAGTTCATTCGGAAAAACGTTTCAGCTGCGGGGATTGCGGCAAAACATTTAATAGAAAGACCAACATGATACAACATTCGAGagttcacagtggagagaagcccttcggtTGCGATTATTGCGGCAAAACATTCTCTCTAAAGAAATCATTAACGCAACATTCGATGACTCACAGCGGGGATTTTAAATTCCAATGTGCGGGTTGTGACAAATCGTTCAGTAGAttagataatttgaaagaacatTTGAGggttcacagtggagagaagcctttcaGTTGCGGAATTTGTGGAAAATTGTTCGCGTATAAGGGAACATTCTCTTTGCATATGAAAATGCACCGAGGTGAGAAGTCCTTCGAATGTACGGAATGTGGAAAGTCTTACTTGAATAGAAGCAGATTGAATCTACATTTGAAGATTCACAGCGGGGACGAATTTAGCTGCCATTTGTGTTCGAAGACTTTCAACTGTAAGTACACTTTGAAAAAACATATGCGAGTTCACAGAACAGAAGAGTCTTAG
Protein Sequence: MEFPSGNIDKTWDVEVIVKTETIDQSEESDAEDTPYEAEPLVGGTQRERGQGNSVAGVMARDDAEGANLFYLNLPNEIGLQNKDYCKEKSYQNSGYRFEDKTLLVKKGTRCRSNKRNNVKKPHVCGDCGKAFKIRSQLERHSIVHTREKPFSCDQCGKLFTRNTSLADHMTIHRGDKHHACRECGAAFNRKGNLTKHLEIHTRKNSTESFKCETCQKIFIQKSSYDRHIILHSGTYVFHCEHCGKGFNNKSNYLIHLRIHTGETPFSCRHCDKSFKDKGTLKIHLAIHDGPFICAECDKSFMHKKNLMFHLMAHSGRYLFHCPVCSKGFNSQSGLKEHSRVHTGEKPFACTECPKTFTKKKSLGVHLKVHSEKRFSCGDCGKTFNRKTNMIQHSRVHSGEKPFGCDYCGKTFSLKKSLTQHSMTHSGDFKFQCAGCDKSFSRLDNLKEHLRVHSGEKPFSCGICGKLFAYKGTFSLHMKMHRGEKSFECTECGKSYLNRSRLNLHLKIHSGDEFSCHLCSKTFNCKYTLKKHMRVHRTEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -