Oalb031421.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Odontocerum albicorne
Gene Symbol
-
Assembly
GCA_949825065.1
Location
OX463863.1:22668878-22678976[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 2.1e-06 0.00016 22.9 1.4 2 23 304 325 303 325 0.97
2 25 1.8e-06 0.00014 23.1 4.0 1 23 331 353 331 353 0.98
3 25 2.2e-07 1.7e-05 26.0 2.1 1 23 359 381 359 381 0.97
4 25 6.8e-05 0.0053 18.1 0.7 1 23 387 409 387 409 0.98
5 25 0.023 1.8 10.2 1.4 1 23 425 447 425 447 0.98
6 25 0.46 36 6.1 1.0 1 23 464 487 464 487 0.93
7 25 0.23 18 7.0 0.0 1 21 519 539 519 540 0.94
8 25 0.13 9.9 7.8 0.0 1 23 602 624 602 624 0.98
9 25 2.1e-05 0.0017 19.7 2.2 1 23 627 649 627 649 0.98
10 25 0.0024 0.18 13.3 1.2 1 23 652 674 652 674 0.96
11 25 0.0002 0.016 16.6 1.0 1 23 677 699 677 699 0.97
12 25 1 79 5.0 2.6 2 20 703 721 702 724 0.92
13 25 1.2e-05 0.00093 20.5 0.9 2 23 731 752 730 752 0.97
14 25 3e-06 0.00023 22.4 1.4 1 23 758 780 758 780 0.98
15 25 1.9e-08 1.5e-06 29.3 3.3 1 23 799 821 799 821 0.99
16 25 0.00013 0.01 17.3 2.0 1 23 827 849 827 849 0.96
17 25 3.2e-05 0.0025 19.2 0.3 1 23 855 877 855 877 0.98
18 25 0.0013 0.097 14.2 4.0 3 23 885 905 883 905 0.93
19 25 7.7e-06 0.0006 21.1 0.8 1 23 911 933 911 933 0.97
20 25 3.8e-05 0.003 18.9 0.8 1 23 936 958 936 958 0.98
21 25 2.5e-06 0.00019 22.7 2.2 2 23 965 986 964 986 0.97
22 25 0.00011 0.0085 17.5 1.6 1 23 992 1014 992 1014 0.98
23 25 0.00042 0.033 15.6 1.1 1 23 1020 1042 1020 1042 0.98
24 25 1.7e-06 0.00013 23.2 3.8 1 23 1085 1107 1085 1107 0.99
25 25 8.2e-07 6.4e-05 24.2 1.4 1 23 1113 1135 1113 1135 0.98

Sequence Information

Coding Sequence
atGAGTTCCCACAATAAAATATCCCGGGATTCCCGGAGCCCAGATCTCGGCTATTCCGGGATGAATTTTAAAAGGGACAGCCACAATTCTGATAGGAGTTTAATAAAAACTCTACCGGTCCACATGTTCGATAATAAAGAAATACCAGAAGAACTCTACAATGCGGAGTGTGAATTCGGAGAGATGGATGTCAAAATGGGTATCTCCGAGATGAACACTTCGCAGGAAGTGTTTTACGAAGAGCAACCGCAGCAACACGAGGAGTTTGATGATTCTACGGAAACGACAGTCGATAAAATACAACACATCGGACACTCGGGCGAATATTTCTCCGATTTCACGATGAGCTCTCAAGAGGAACTGCTATCGGTCGGAATGGACGCTTCTAACGCCGagataaatagtaaaataatcgATTCTAATCTTGTTTTGAATGCGACGAGTGATTTTACAGATTTCTCCGCCAGTTCTCTCCTGAGTAACTCCGATTTTTGTAACGTCATCTCCGAGAtgaagattgaaaatattacagatATCGAGAGTATGGGTGATTTGTCCGAGTGCTTTATATTGGTCGTGGATCCTGATTCTAAGAAGATAGATCCGGACGATTTCATGGAGTCCATAGACGATATAGATAATACAATCGAGATTGGAAATACGGAAGATGTTTACAATTCAGATTTGCCCATTTCTGATATAGATTCTGACGGCCCTTACATAGTCGAGTATGAGAATGATTCAGTGAAGACGTGCAGGAAGTTAAATGACACTTTCATAAAGGAAGGTCCCAATGAGCCGATATGCGAACTGGTCTACAACAGCGAGGATTCCATCCCGGTCGACTCGGACTCTACTTTCCCTTTCAAGAGAATCCTGACCGTGAAACTGGAGAATCAGCGGAACAAAGTGTGCAACGAATGCGGAAAAACGTTCAAGAGGAGACATGAACTGGTTGCTCACGAACGAATTCACAGCGGAGAGAGACCGTTCAGCTGTAACGagtgtaataagacattcaaTCAACTCTCTCATTTGAACTCTCACAGAAGGATCCACACCGGCGATAGACCTTTCGCTTGCGgcatttgtaagaaaaaatttACTGACAGGAGTAATTTAAAAAGGCACATGAGTCGACACGACGTGGTCCTTCCGTTCCGTTGTAGAGATTGTAACAAGGGTTTCGCTTATCAGAGTCTTTTAATATTACACGAAAAGAGTCACGTCAAGGAGAATCTGAAAATGAATAAGAAGAAACACAAGAAGACGTATTCGTGTGACAGTTGTGCTGAAAAATTTCAATCTAAACGTCTTTTGAAAGAGCACAAGCTAACACACAAGACTCGGTATCGTGTCCGTGGAAAGCCGAGGAATTCGGAAAAGTTTTTTATCTGCGCACATTGCGGGACGACTTTGTTAAGTAAAAAAGTTCTCAAGAAGCATATTGTTAGTAATCACATGTCCAAAAAGAGTTCCGTTAACAAAGGTGCCGCTAAAGGTATCGACAAAATAGAGAAGAGCGATTCGAGTCAAGACGAAAATCGAAATGTGTTTATTTGCGGTAAATGCGGGGATACGTTTGCTATTAAGGATTCTTTAGTGGAACATTTGAACGATTGTAGTTCGTACAGTTCTAACGAATATGTTGTTAACATAGATAAAATAGATTCGGATCAGAATCGAAATGTTGATAATCCGTCTGCCACGGATACGGAactaaaatcaaacaaaaaaactgacAAGAATGATAATAAGGTCGAAAAATTGAAAGAGAAAGAAAATCAACGTTTCCAAAAGCCGTACCATTGCGGAGAATGCGGAGACGAGTTTATAGATATTAATGCTTTAGCAGAGCACGTAAAGGTGCATAAGGTATATACGTGTAGAAAGTGCGGGGAAACGTACTGCGATAAGGATCTATTGACTGAACACATGAAGGGACACAAAGGTTTCACttgtaaaatatgcaaaaacaaATTTGACAATGAGTCCAGTTTGATAGAACACGCAAAGTTCCATAATCTCTACTGTTGCTggcaatgcggaaagagtttCATAAAAGAAACTGATTACGAAGAGCACATTAACATACACAAGCCTGTTCGATGCGATAAATGCAACAAATTGTTTTCGTGCAAAATGATGTTGACCCGTCACAGGTGGATTCATAACAGGGCGAAGGATATACCTTGTACCGATTGCGGGAAGATGTTCCAAAGGATGCACGACTTGACGGCGCATAGGAGGATACATACCGGCGAGAGACCGTATAACTGTGCTGAATGTGGCAAGTCATTCAAACAAATCGGTCATTTGATTAAACACAAAAGGATTCACAGCGACACGCCCGAGGTTAAACAGATCAAATTCTCACTGATTAACAGAAAAGAGTTCAAATGTGAACATTGCGGAAAGTCTTTTAAGCGACCGCACGATTTGACAGCGCACATAAGGATCCATAGCGGAGAGAGACCTTACTGCTGCGACGTGTGTGGCAAGGCCTTTAAACAAATCGGACATTTGATGGCGCATAAAAGTCTGCACAGTGGCGTGAAGCCTTTCAGTTGTGAACACTGCGCTAAAGCATTTGTATCTAAACCCAGTCTGCAGATTCATATGATTGTTCATAGAAACTATAAGCCGCATTTGTGCGATGAATGTGGGAAAACTTTCGCACGCAAATGTGAACTTCTTTCTCACGAGAAATTCCATAAGAACTCTCTTCCTCATAGTTGTGTTGAATGCGGGaagatatttataaagaaaaatgatttaatcAAACATATGAATATCCACAAACCGTTTACTTGCGAACAGTGTGGCATGGCATTCTCTTTTGAGAATCTTTTGACTCGTCACAAGAGAATTCACATTAAAGAGAAACTGTTAACGTGCAACGAGTGCGGTAAGACTTTTAGACGCATGCACGATTTGAACGCGCATAAAAGAGTGCACAGCGGAGAAAAGCCCTTTTCGTGCGGGGAATGCGATAAAACTTTTACGCAATTCGGTCAGTACATGTCTCACAAGAAGATACACAGCGGAGAGAAACCGTTCAGTTGCGGAATTTGTTCGAAAGAATTCGGCGCGAAGAACAACTTTAAACGCCACTTGAGCACCCATAACAAGTTGAATCCGAAATCAAAGAAGAAAACTGTCGATAAAGTGGCTACCGCTGTCGAGGAATTGAAGCTCTTCACTCCGAAGGTGAAGAAAAGGCAGGAGAAAGCTCGTAAGACTGAGGATTCCTTTAAATGTAAAGTTTGTGATAAGACTTTCAATAGACGGGGACATCTGATCTCCCATAAGAGAGTGCACAGCGGTGAGAAACCGTACGTGTGCAGGGAATGCAATAAGGGTTTCAcggataaaagtaattttaatagaCACGTTAAAATCCATTCTGTAGATCATAACAAGATTTTGTACGCTTCGTTGGTTTAA
Protein Sequence
MSSHNKISRDSRSPDLGYSGMNFKRDSHNSDRSLIKTLPVHMFDNKEIPEELYNAECEFGEMDVKMGISEMNTSQEVFYEEQPQQHEEFDDSTETTVDKIQHIGHSGEYFSDFTMSSQEELLSVGMDASNAEINSKIIDSNLVLNATSDFTDFSASSLLSNSDFCNVISEMKIENITDIESMGDLSECFILVVDPDSKKIDPDDFMESIDDIDNTIEIGNTEDVYNSDLPISDIDSDGPYIVEYENDSVKTCRKLNDTFIKEGPNEPICELVYNSEDSIPVDSDSTFPFKRILTVKLENQRNKVCNECGKTFKRRHELVAHERIHSGERPFSCNECNKTFNQLSHLNSHRRIHTGDRPFACGICKKKFTDRSNLKRHMSRHDVVLPFRCRDCNKGFAYQSLLILHEKSHVKENLKMNKKKHKKTYSCDSCAEKFQSKRLLKEHKLTHKTRYRVRGKPRNSEKFFICAHCGTTLLSKKVLKKHIVSNHMSKKSSVNKGAAKGIDKIEKSDSSQDENRNVFICGKCGDTFAIKDSLVEHLNDCSSYSSNEYVVNIDKIDSDQNRNVDNPSATDTELKSNKKTDKNDNKVEKLKEKENQRFQKPYHCGECGDEFIDINALAEHVKVHKVYTCRKCGETYCDKDLLTEHMKGHKGFTCKICKNKFDNESSLIEHAKFHNLYCCWQCGKSFIKETDYEEHINIHKPVRCDKCNKLFSCKMMLTRHRWIHNRAKDIPCTDCGKMFQRMHDLTAHRRIHTGERPYNCAECGKSFKQIGHLIKHKRIHSDTPEVKQIKFSLINRKEFKCEHCGKSFKRPHDLTAHIRIHSGERPYCCDVCGKAFKQIGHLMAHKSLHSGVKPFSCEHCAKAFVSKPSLQIHMIVHRNYKPHLCDECGKTFARKCELLSHEKFHKNSLPHSCVECGKIFIKKNDLIKHMNIHKPFTCEQCGMAFSFENLLTRHKRIHIKEKLLTCNECGKTFRRMHDLNAHKRVHSGEKPFSCGECDKTFTQFGQYMSHKKIHSGEKPFSCGICSKEFGAKNNFKRHLSTHNKLNPKSKKKTVDKVATAVEELKLFTPKVKKRQEKARKTEDSFKCKVCDKTFNRRGHLISHKRVHSGEKPYVCRECNKGFTDKSNFNRHVKIHSVDHNKILYASLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-