Oalb034507.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- Zbtb8b
- Assembly
- GCA_949825065.1
- Location
- OX463868.1:10946685-10967102[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 34 3.4e-05 0.0026 19.1 1.9 1 23 151 173 151 173 0.98 2 34 0.08 6.2 8.5 1.2 1 23 186 208 186 208 0.96 3 34 1.4e-05 0.0011 20.3 5.0 1 23 214 236 214 236 0.98 4 34 0.2 16 7.2 3.6 1 23 242 264 242 264 0.95 5 34 0.00012 0.009 17.4 0.1 1 23 270 292 270 292 0.98 6 34 3.1 2.4e+02 3.5 5.3 3 23 300 320 298 321 0.93 7 34 0.00013 0.01 17.2 0.9 1 23 428 450 428 450 0.98 8 34 0.056 4.3 9.0 2.8 1 23 456 478 456 478 0.98 9 34 0.61 47 5.7 0.2 1 23 484 506 484 506 0.97 10 34 0.0015 0.11 13.9 0.6 1 23 512 534 512 534 0.98 11 34 0.00014 0.011 17.2 4.3 1 23 540 562 540 562 0.97 12 34 0.73 57 5.4 3.7 1 23 568 590 568 590 0.97 13 34 3.8e-05 0.0029 18.9 0.1 1 23 596 618 596 618 0.98 14 34 0.00016 0.013 16.9 5.1 1 23 624 646 624 646 0.98 15 34 0.00011 0.0084 17.5 0.6 1 23 656 678 656 678 0.98 16 34 0.0002 0.015 16.7 3.1 1 23 717 739 717 739 0.98 17 34 0.00044 0.034 15.6 1.4 1 23 814 836 814 836 0.96 18 34 0.00059 0.046 15.2 0.7 1 23 842 864 842 864 0.93 19 34 0.00036 0.028 15.8 1.6 1 23 902 924 902 924 0.99 20 34 0.0078 0.61 11.7 0.1 1 23 930 952 930 952 0.97 21 34 1.2e-06 9.4e-05 23.6 1.3 1 23 958 980 958 980 0.96 22 34 0.036 2.8 9.6 3.0 1 23 1089 1111 1089 1111 0.96 23 34 5.4e-06 0.00042 21.6 0.4 1 23 1117 1139 1117 1139 0.97 24 34 1.3e-06 0.0001 23.5 0.9 1 23 1145 1167 1145 1167 0.97 25 34 9.6e-06 0.00074 20.8 0.8 1 23 1304 1326 1304 1326 0.98 26 34 0.0069 0.54 11.8 0.9 1 23 1332 1354 1332 1354 0.97 27 34 2.7e-05 0.0021 19.4 0.7 1 23 1360 1382 1360 1382 0.97 28 34 0.00028 0.022 16.2 1.5 1 23 1391 1413 1391 1413 0.98 29 34 0.0019 0.15 13.6 1.3 1 23 1422 1444 1422 1444 0.96 30 34 0.096 7.5 8.2 1.5 1 23 1450 1472 1450 1472 0.94 31 34 7.5e-06 0.00058 21.2 0.8 1 23 1478 1500 1478 1500 0.98 32 34 1.6e-05 0.0012 20.1 0.7 1 23 1506 1528 1506 1528 0.97 33 34 3.7e-06 0.00029 22.1 0.2 1 23 1534 1556 1534 1556 0.97 34 34 0.00088 0.069 14.6 4.3 1 22 1562 1583 1562 1586 0.91
Sequence Information
- Coding Sequence
- ATGGATCTGAACCACCATCATCAAGGGGACAGGGTATTCACAGACCTGGATATATCTCGAGATTACGCCATGATGAATATGCACAAACAATCTCTTATATCGGATGTTTCGAGagattatataatacatgacaAACAATCTTTAACATCGCCCGATATCCTGCGAGACTATACATTGCATACAAAACAAATCCTAGCACCGGATCTCTCGAGAGATTACATCATTGCTAATAAGCAAATGCACCCTCCAGAATATTCCATGCCGGATAAACATCAACTGATGGCACCGCATAATATGAAAAACATCTACCACGATATGAGAGGTTATCCGAAAGAACAAGAAAATGATATTCATAAAACTAATCCTTTTGAATGTAACATGCCAACGATGCCAGCAGCGCAAAACAACACGAAACCTGATGATGACACTTCTACAACTGCCAAGAAAACGTTCACGTGTGATATTTGCGGGCGCGTGTGTACTAAATTGAGCGCTTtgaacaaacataaaaaaatccacacgaATCCTAGTAAAAAAGCAAACGGCGAGAAAAAATACAGTTGTGATTCGTGTAACTTTGTCTCGCAGTATTCCAGCGCGTTAAAAAGGCATAAACTCTTGCATACTTCTGAAAGAACGTTTCCTTGCGAGTTGTGCGGGAAAGTTTTCTCTCAACAGTGTCATTTGAATACGCATAAAAAGACTCACACGGGCGAAAAGATTTACTCCTGTAATCTTTGTGATTTTATAACTCCGTATCACTATTCCCTCAAAAGGCATAAGCTCTTCCATtctggagagaagcctttctCCTGTTTTGTGTGCGGTAACTCTTTTGCTGGAGCCCCTGATCTAAAGAGGCACATGAGAGCGCATACAGGGGAAAAGCCTTACGGATGCAATTTATGCGGAAGGCTCTTCAGGCAAACGGGACATTTGAAATTCCACAAAACTAAACATCATCCggaacatgttgaaaataaacctAAAAGAATATCTGTGGCTGATAGCTATAGAACGCCACCGCAAGCCGTTATCAATAGCGCGACAAATACCCAACAACCTAATAATAATTGTGCTAATTTAACTAATACGGCTTCTAATGGTTTAGCGGGACAAACAAATGTTAGTTCGAACACACAAATAAACGTTCAGACTACAAATATGACTATAAATCAACAAAGCTCTAGTGTTCCTGGTGTAAAAAAGCCTCCAGAGAATTTGGACAGTCAAGTAGTTACGTATATCAAACCGATTAAAGAAAAGAATCCCAGGAAACCATACGCGTGCGATCAGTGTGAGaaagttttcaaacttttaCGCAATCTTAACACCCATAAACGGATTCACGCCGGCGAAAAAGCGTTTTCATGCGACGAATGCAGCTTTgtcactttgcaccctagcTCTTTGAGGAAACATAAGAGAAGTCATACAGTCGCTAAACCGTACAACTGTGACGCTTGCGACCTGTCGTTTTGGAAAGAGGACCGTTTGATCGCGCATAAAAAGACCCACGAAACGGACAGAACTTTCTCTTGCGACGAATGCAACTTTGTTTCTTCTTATTCAAGCGCGTTGAGTAGACACAAAATGATCCATAACGCTCAAAAACCGTTTGCCTGCGAGTTGTGTGGGGAGAAATTCTCGCAACAGTGTCACCTTAATACACATAAAAGGATACATACAGGTGAAAAGTTGTACTCTTGTAGTCAGTGCACTTTTATTACACCTTATCATTACTCTTTAAAGAGGCACAATCTTTCACATTCTGGTGAGAAGCCGTTCCCTTGTACCGTCTGCGAGAACTCATTCTCTGGAGCTGAAGACCTTAAACGACATATGAGAGCGCATACTGGAGAAAAACCGTATTGCTGTAATATATGCGGTCGTCTTTTCAGCCAAGCGGCACATCTCAAGAACCACAAGAAAAAACACTTCATAAATCCAGATCAGGTCAAAGTATTCAAATGTACTGAATGCAGTGAAACCTTTCCCGACTCGGCAACTTTGAAAAGTCACAAATCGGTACACAGACAACCGGAAACTCGTGATAAATGCAACTTTGATTCGCAGAATTGTGATAAATCCAGCTTCGCTGCAACGGAAACGGACGCTTTCAAGGAGCATAAAAAGAACGATAAGCCCTTCTCGTGTTACGTGTGCGGAagtgtattcaataaaaaagacTGTTTGAACAAGCATATGAAAATTCACGAAGATAGCAATGGTCAAGTCAAAAGAAATTATTGCGATGAACAAAATGGAAATAGAATCATAGAGGATGCTGGAAATTTGGATATATGGGACGAGTTCGAGAGAAGCAATGGTTTAGTTACGGATAATAGTGAACTGGGAAAGAAATCGGAAGTAAGAAATGGTAGTTTGTTCGGATGTGATAAAACTTCGTGCATTAACGAAGACGACCAAGAAAGAAAACACCAGTGCGAAATTTGCGGGAAAAAATTTGCCAAATTGAGTGTGATGAAAAGGCATCGTTTGGGACACGACACGACCAAAGCGTACCTTTGCGATCTTTGCGGACGGGCTTTTTCGCAGCCGATGAGTTTGAAATATCACCGGTTCAATCATCTGAAAGATAAACTCAACGAGAAAGGTCGTGTGACATTGACGAAATCATCGTACAACGGTGGAGAACCTTCGAAACCATTTCTGTGTGATGGAACAGTTCAAAAGAAATCGTTCAAGTGTAGCGAATGCCCTTACTCTGCGTCTCGTTCACGCGATGTTCATGTTCACATGCGAACGCATACCGGTGCTAAGCCTTTCCCTTGCGGAATTTGCGGAAAATGGTTCTCGAAAGAGAGCGTCGTTAAACGACATCAGTTGATACATAGCGGTGTTAGACCGCACATTTGTTCTTTGTGTGGAAAGTCGTTCACGCAAGCCGGGAATTTGAAGTCGCACATGTCTAATCACGTCGGGAAGGAAcggataaataatttgaaaggaAATCTGAAttgtaaaagtgatgttttaattaattctttGGTACAGAGTAATACAACTGGTACTGAATACTGTACGATTAATCAAATCGATACTCGTTTCATATCCGAACAAGTTAATCAATTCAGGAAAGAACCTACAAACGATTTAGGAAATGATACTGCGTCCGAGAGTGAAACACACAATACAGTGCCTAGAGTTATAAGAATCGAGCATTCGCCGAGAAGTTACGGAGTAAGAAAAGTGAAAGCTCAACAAAAGGTTGTTATTTCAAGACCGCGCGTCAGGAAAAAACACTTTTGCGACGAATGCCCTTACTCGACGTCGTCGTTCCGTGATATGACTGTACACAGGCGCAAGCACACCGGCGAACGCCCTTTTCCATGTCCGATTTGCGGTAAACGTTTCTCGAAACAGAGCGTCGTGAAACGCCATCAATCCGTACATACTGgactgaaacctttttattGCGAGATCTGCGGAAAATCGTTTTCGCAAGCCAGCAACATGAAATCGCATAAGATTAGCCACTTTGATGAGACAACCGGACTTCCTATTGAAGCTAGAACGACTAAAGAAattgttgaagtgaaaaataatgaaattagaCACTTTTACAACGCTAAAAGATGTCCAAGTAAAAACGATACATTTAGAGATAATACCTTAGTAAAAAAGATTAATATAAGTAAGTTCGAAGTTCCTATTGAAGACAAGACACCCAAAGAAACTAGTGAAAGTGGACACGTTTACGAGACTAAAAGACTTCCAATTGAATCGAAAACACTTAAAGATATTAGTTGCGGCAAAGAGATTTCGAGACTTTCTGATAAtgtaaaaacacttaaaaaatttGCTATCAAAGGCGAAAACAATCGTTCTGATTCTGatATGAATAATAAGAAAGGTGTTTCTGTCGGAGATAAGAaatgtaacgtgttttattGTAACGAATGTGACTATACAGTTTCGAATAAACGAGACTTGACTGTCCATATAAGATCTCATACGAAAGAAAAGTTATACGAGTGTGACATTTGCTTCAAAAGGTTTGCAAAACAAAATGTCGTTAAACGTCACAAATTAATACACAGCGGCGAAAGGAATTTCGCTTGTCTGTTGTGCGAAAAACGGTTCACGCAATCGAGCGGACTTAAATCGCATATGGCGAAACACGTCACGGTCAAACAGGAACTGCCATATGTTTGCGAAACGTGCGGAAATTCTTTCGCTCAAGAGAAGAGTTTGAAAAATCACCGACACGTGCATAGACGGGAAAAGACTGCGACTCAGTTCGCTTGTCAGTTTTGCGGGAAAATTTTCTCGTACGAATGCAGGTTGAAAGCGCATTTGATTGTGCATTCGGGGGAAAAGAAATTTCAATGCGACGTAtgcgataaaaagtttttacgGATTTACGAtatgaaatatcataaattgCTGCATACGCAGGAGAAGTTGTTTATTTGCGATACGTGCGGCAAAGCTTATTCAACTCCGACAACTTTGAAATTGCACAAACGTACGCAttctggagagaagccttatgtATGTCATATTTGCGGAGTGTCGTTCGCACGGCCCGGACATCTTGGAAGGCATAAAATATCTCACACGGGTCTCAAAGCGTACTCGTGCGGTATTTGCGAGAAATCTTTCACGCAGGCAAGCGGACTCAAAAAGCATTTGGTTATTCATAGCGGCGAACGGGCTTTTTCGTGTGAAATTTGCGGCAAGGCTTTTAAATTAATGACGCACTTGAGGAAACATCTTAAACACACGAAACACTCcagtaaaagttaa
- Protein Sequence
- MDLNHHHQGDRVFTDLDISRDYAMMNMHKQSLISDVSRDYIIHDKQSLTSPDILRDYTLHTKQILAPDLSRDYIIANKQMHPPEYSMPDKHQLMAPHNMKNIYHDMRGYPKEQENDIHKTNPFECNMPTMPAAQNNTKPDDDTSTTAKKTFTCDICGRVCTKLSALNKHKKIHTNPSKKANGEKKYSCDSCNFVSQYSSALKRHKLLHTSERTFPCELCGKVFSQQCHLNTHKKTHTGEKIYSCNLCDFITPYHYSLKRHKLFHSGEKPFSCFVCGNSFAGAPDLKRHMRAHTGEKPYGCNLCGRLFRQTGHLKFHKTKHHPEHVENKPKRISVADSYRTPPQAVINSATNTQQPNNNCANLTNTASNGLAGQTNVSSNTQINVQTTNMTINQQSSSVPGVKKPPENLDSQVVTYIKPIKEKNPRKPYACDQCEKVFKLLRNLNTHKRIHAGEKAFSCDECSFVTLHPSSLRKHKRSHTVAKPYNCDACDLSFWKEDRLIAHKKTHETDRTFSCDECNFVSSYSSALSRHKMIHNAQKPFACELCGEKFSQQCHLNTHKRIHTGEKLYSCSQCTFITPYHYSLKRHNLSHSGEKPFPCTVCENSFSGAEDLKRHMRAHTGEKPYCCNICGRLFSQAAHLKNHKKKHFINPDQVKVFKCTECSETFPDSATLKSHKSVHRQPETRDKCNFDSQNCDKSSFAATETDAFKEHKKNDKPFSCYVCGSVFNKKDCLNKHMKIHEDSNGQVKRNYCDEQNGNRIIEDAGNLDIWDEFERSNGLVTDNSELGKKSEVRNGSLFGCDKTSCINEDDQERKHQCEICGKKFAKLSVMKRHRLGHDTTKAYLCDLCGRAFSQPMSLKYHRFNHLKDKLNEKGRVTLTKSSYNGGEPSKPFLCDGTVQKKSFKCSECPYSASRSRDVHVHMRTHTGAKPFPCGICGKWFSKESVVKRHQLIHSGVRPHICSLCGKSFTQAGNLKSHMSNHVGKERINNLKGNLNCKSDVLINSLVQSNTTGTEYCTINQIDTRFISEQVNQFRKEPTNDLGNDTASESETHNTVPRVIRIEHSPRSYGVRKVKAQQKVVISRPRVRKKHFCDECPYSTSSFRDMTVHRRKHTGERPFPCPICGKRFSKQSVVKRHQSVHTGLKPFYCEICGKSFSQASNMKSHKISHFDETTGLPIEARTTKEIVEVKNNEIRHFYNAKRCPSKNDTFRDNTLVKKINISKFEVPIEDKTPKETSESGHVYETKRLPIESKTLKDISCGKEISRLSDNVKTLKKFAIKGENNRSDSDMNNKKGVSVGDKKCNVFYCNECDYTVSNKRDLTVHIRSHTKEKLYECDICFKRFAKQNVVKRHKLIHSGERNFACLLCEKRFTQSSGLKSHMAKHVTVKQELPYVCETCGNSFAQEKSLKNHRHVHRREKTATQFACQFCGKIFSYECRLKAHLIVHSGEKKFQCDVCDKKFLRIYDMKYHKLLHTQEKLFICDTCGKAYSTPTTLKLHKRTHSGEKPYVCHICGVSFARPGHLGRHKISHTGLKAYSCGICEKSFTQASGLKKHLVIHSGERAFSCEICGKAFKLMTHLRKHLKHTKHSSKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -