Oalb033819.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- -
- Assembly
- GCA_949825065.1
- Location
- OX463868.1:35113-49368[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 36 0.0003 0.023 16.1 0.6 1 23 220 242 220 242 0.97 2 36 1.8e-06 0.00014 23.1 1.9 1 23 247 269 247 269 0.99 3 36 2.4e-05 0.0019 19.6 0.2 1 23 275 297 275 297 0.98 4 36 0.0064 0.49 11.9 4.0 1 23 302 324 302 324 0.97 5 36 0.65 51 5.6 0.6 3 23 332 352 330 352 0.95 6 36 7.3 5.7e+02 2.3 2.6 1 23 358 380 358 380 0.89 7 36 0.00025 0.02 16.3 1.4 2 23 387 408 387 408 0.98 8 36 2.1 1.6e+02 4.0 0.3 2 14 442 454 441 456 0.86 9 36 0.014 1.1 10.8 1.9 1 21 470 490 470 491 0.95 10 36 9.1e-05 0.0071 17.7 2.5 3 23 531 551 529 551 0.95 11 36 1.1e-06 8.7e-05 23.8 0.3 1 23 557 579 557 579 0.97 12 36 0.02 1.5 10.4 0.3 1 19 585 603 585 603 0.96 13 36 0.00015 0.012 17.0 1.7 1 23 665 687 665 687 0.98 14 36 4.7e-05 0.0037 18.6 1.9 1 23 693 715 693 715 0.96 15 36 2.2e-07 1.7e-05 25.9 1.6 1 23 721 743 721 743 0.98 16 36 0.00037 0.028 15.8 2.0 1 23 749 771 749 771 0.97 17 36 7.5e-06 0.00059 21.1 1.9 1 23 777 799 777 799 0.98 18 36 3.9e-05 0.003 18.9 3.1 1 23 805 827 805 827 0.97 19 36 8.1e-05 0.0063 17.9 5.6 1 23 833 855 833 855 0.97 20 36 0.0031 0.24 12.9 0.9 1 23 871 894 871 894 0.96 21 36 3.4e-06 0.00026 22.2 2.6 1 23 900 922 900 922 0.98 22 36 0.00025 0.019 16.4 0.3 1 23 928 950 928 950 0.95 23 36 3e-05 0.0023 19.3 0.3 1 23 956 978 956 978 0.98 24 36 0.004 0.31 12.6 0.2 1 23 1023 1045 1023 1045 0.94 25 36 7.9e-05 0.0061 17.9 0.3 1 23 1051 1073 1051 1073 0.98 26 36 0.0004 0.031 15.7 0.6 1 23 1255 1277 1255 1277 0.98 27 36 2.2e-05 0.0017 19.7 2.3 1 23 1283 1305 1283 1305 0.98 28 36 7.2e-06 0.00056 21.2 5.8 1 23 1311 1333 1311 1333 0.96 29 36 5.3e-07 4.1e-05 24.8 1.5 1 23 1339 1361 1339 1361 0.97 30 36 2.4e-06 0.00019 22.7 0.3 1 23 1402 1424 1402 1424 0.97 31 36 1.5e-06 0.00012 23.3 0.3 1 23 1430 1452 1430 1452 0.98 32 36 1.6e-05 0.0013 20.1 1.5 2 23 1459 1480 1458 1480 0.97 33 36 0.055 4.3 9.0 5.4 1 23 1486 1508 1486 1508 0.96 34 36 3.7e-05 0.0029 19.0 0.6 1 23 1514 1536 1514 1536 0.98 35 36 3.3e-06 0.00026 22.3 0.7 3 23 1544 1564 1542 1564 0.97 36 36 3.4e-05 0.0027 19.1 1.1 1 23 1570 1592 1570 1592 0.98
Sequence Information
- Coding Sequence
- atGTACGTACCGGTATACCGAACAGGTCGCACCTTACCACAGAAGCGCATACTGCAGGGCGGGTCTCCCGCCCCTTATTCCACAGCGGAACTTTTCAGGAAGTATCGGGTCCTTAACGTTAGACCATGCCCCCTCGCTATCCTTAGCCACTTTGCACGGCAGGCCAGGGTCAGTGCAGGCCAGGTGATGACTTCTCAACAGCAAATCCAAAACTTGAATCTGAGGAAACTGATCCAGGCAATAGTGAAAGAGGAAAATGAGAACACGAACGATGCGGCGAATGTCGAGTACAAAATCCACGTGCGCAAAGCAAATGCCACGGGACAGTTCTCTCAAATCGGAAATACTAATGTTGGAAATGAATATGTCGCCGGAGATTACGgTGAACCCGGTCCAAGTAACATCCAATATGAACAAATTGATCAAATATTCATAGTCTCCGGAACTGGCGAATTTTCCGAACTCAAAACAGTTACTTTAGATGCTCAGCAAAAAGAAACGACTGAACCTGACATCACACGAGGTTTGTTATCGAGCCAATTGACCAGTCTGCCAGAAGTGTTGTCCAGTGAAGAAAGGGAAACTCACAATTGTGAAAATTGTAGGGAGAATTGTCGGGGAAGGTGCGATCTCAAAGATCATGCCGAAAAGAACTGTCATAGCTGTGAAACCTGCGGAAAAGTGTACTCATTGAGAAATGCTCTGCTCCGTCACAAATTGACACACAAAGAAAAACCATACCGCTGCGAAGACTGCGGCAAGTGTTTTATTGGAAAATCCGACTTGAGCAACCACAAAAGGGTGCACGGTCAAATCAAACCGTTTACGTGCGCCCAGTGTGGTAAGGGATTTTCCGCAAAAAGCAGCCTCAAAGTACACCTCTCAGTACACAATGAAGCGACTCACAGCTGTGATGTTTGCGGGAAGCTTTTTGCTAAAGAGTGTCTTCTCAAGAGACACAAGAAAATTCACAGTGGACTGAAACCGTATGGCTGTGATATATGTAAGAAGAGGTTCTTGAGGAAATTTGATGCCATTAATCACAAATTGATACATTCAGATATTAAACCTTTCATTTGTAGATTTTGTAGTAAGGCGTTTAGATTGAAAAACGCGTGTAAAGTGCACGAATCGATTCATAACGGAGGAAAAAATCCCCGTTGTAAAATATGTTGCGaggaattttcaaataattctcAATTGGCGGCACATATGCGAGTCCACGACAAAAAGAAACCGATAGAATGCCAGAAGTGCcgtaaaatattgacatttgcAGATACTCCAGTCGCGCATTCAACGGATCATACGGAAGTCGAGTCCGTGTGCGGAGAATGTTATAAAACGTTTTCATCCGAAGATGAACGACTGATTGCTCAAAAAAATTTCCACAGTTCAACCGAAATGTTCACTTGTAACAAATGCGGAGATAGTTTTGTAAACGAACATAATTTCACTGAACATAAGaagaattattgtaaaaaagaaTCTATTATAAATGACTTGAAGACAGCCGGAGAATGTAATGAAGTGAAGAAGAAATCTGTCACTTGGAAGAGGCAAATGAAAAGTCTACCCAAATATTTTGGCTGCGAAGAATGTGGTAAAAAATGTTCTAGTAAAAGTAACTTGAACAAGCACAAGGTTATCCATAGTGGAGTTAAGGGTTTTATCTGTGACAAGTGCGGGAAGAGTTTTGCGCGGAGAGGAAATTTAAGGGAGCACGCAAAAGTCCATTCTAAAAAGTACCCATTTTACTGTAGCAAATGTGGAAAAGGGTTTATAGCGAGAAGTAGTTGGATGAAGCACGATAATGTGTGTTGTGTCGTAAACCCTTACGTCAATCCAGGACCTGAGAAGAATGAGTTCGTCTCTAAAGAAATACAACAAAGCGACGAAGAATTAGATCCAATTAGGCTGAAAGGTACAGTTGAAGAGAACGTGGATACGGGTGATAGAGGAGAGACTTTTGAATGCGATGGAGAAAAGAGATATCGTTGTGGAgaatgtagtaaaatatttcgAAAGTTGACTCTTCTGAATCGGCATAAAAAGATTCATAAAGGTGTGAGGCCTTTTGTATGCCCGGAATGCGGGAAGAGTTTTATGAGGAGGACAGATCTAAGAGATCATTGCATGACGCACAGTGGGTTGAGGCCATTTGAGTGCGACCAATGTGGGAAAACATTTACGGCAAAAAGTAATTTGAAGAAACATATGCTGTATCATATGGAGAAGAAACCGCATCGTTGCGAAGATTGCGGCAAGACATTCACAATGAGGAgcattttgaaatatcatgcGCGGGTTCATAGTAACGAGAGGCGTTACGTCTGCGAACACTGTGGCAAGTCTTTCAAGATGAAACAAGGTTTGAACATACACAGATTGACACATACCGGTGTTAAACGTCACATGTGCGAGCAGTGCGGGAAGACGTTTGCACTCAAGAGCACTTTGAAAAACCATAAAATGACGCACAGTGAGTTTAGGGCTTTTTGCTGCGATGAATGCGGAAAGAAGTTTTCTCTGAAGGCGCATTTGAAGCAACATCAACTCAGGCATAGTTTAAACAAGAGTGCACTGTTGCAGCATAACGGGGAAAAGCAATATGATTGTAACATGTGTGGGAAAAGATTCTTAACGAAGAGTCGGCTGTCGGGGCATATGAATTATGTTCACATTTCGGAGAGGAATTTTAGATGCGATATATGCGGGAAAAGGTTTACAACTTCGGATCGATTGCACGAACATCAGAGAATTCACAGTAATATTAAACCTTTCGTGTGCGACGTCTGCTCGAAAGGATTTGCAAGTAAGTCTAATATGCTTAAACATAAAGTGATTCACAGTACAGTGAGGCCATTTGAGTGTGCGGAATGTGGAAAGACGTTCCTTAGGAAAGGGAATTTAAAGGAACACGAAAGAGTGCATAGAAAGGATAAATTAACTAGAAAGATcaaagaagaagataaaatttTCTGCTGTGAAATATgcggaaataaatatttgacagaGCAAACATTAGGTTCGCACAAGGTAATGCATAGCGGCAAAGGGAAAACTTTTACCTGCAAGGAGTGCGGCAGGGGTTTCCTCAGAAAGGCTGGACTGTTAAGACACGAGGCTCTGCATGTCGGCAGTAGGCCGTTTGTGTGCGGAGAGTGTGGCAAGACTTTTCCCATTCAGTTTTACTTGGCGAGGCATAAGAAAGTACACGCAAAGgagaaaatcattaaaaatatcaaaaataaaaggaaaaatgcaTCGAAAAGGAATAGACAAAAGCGTAGATTTGTTAAGAGTGAAGAAAAGTCATCCAGTCGTAGCGAAGTGGTCATCCCTCAGATTGGTAACGTACCGGAAATTGTTTGTTTGGTGAATGCAGAAGACACCCTCTCCCTCTGGTCAGATGAACAGGGTATCAATGATACGCAGACTATTATAGCTATAGATGATAGCATTTCACAACAAGTGGTCATCGATAGTGAAAATACACAGACTGCTGCTATTGTAGACGAATCTCTCAATTTGGCTATTGATAACTCACAACAACTTAGCAATTCTAACATCGACAATGCGGACGAACCTTACGATTCTTACATCCAAAATGCTGAAGTAACGTTGTATTCCGAGACGGGCAACGCGAATGAGCATTTTTCTTCCGAAAGGTATAGTGTGGAAGAACCGCAAACTTTAATTTCTAACATCAATAATgcggaaaaaaaaattgattccgACATTGATAaggtgaaaaaaatctttatatgtgACGAATGTGGGAAGCAGTTTGCGAAGGGACAACTTCTGTTACGCCATAAAAAGACACACAGAGCCGAGAAACCATTTTCTTGCGAAATTTGCAGCAAGAGCTTTCACCGCAAGTCTGACTTGGTGACGCACGAACGTATTCACAGCGGAGAGAAGCCACACTGTTGCGAATTGTGCGGGAAGAGGTTCTCCAATTATAGTAATTTGAAGAAACACATGACAGTGCATAGCGGAGAGAAGAGCTTTAGCTGTGAGGAATGCGGCAAAGCATTTAAACAGAAAACTAACCTGACCAAACATAGAACGATACACAGGAAGAATAGAATACACCAGGCTTTTATAGCCGCTGAATACGGAATACCAGTGTCGGAAATGAATCGCATGAAAAAGGACCACACGGTAGACCGTATAAAGAACGAAACCGGAGGAAGTTTCATATGCGAAGATTGTGGTCAGATATTTAACCAAAAAAGTAATCTCACCCAACATAGAGCTGTTCACGATGCTTCAAATACGTTCACTTGTACAGATTGCGGTGAAAATTTTACGAACAAGTCAGATTTACAAGATCATGCAAACATTCATTTAAGTCAGGAGCCTTTGTCTTGTAGTATTTGCGGAAAGACTTTTTCAAAGCGAAGTGTCTTCGAATCACATCAAAAGACCCATAGTAAAATAAGGCCGTATCAATGCGAACATTGTCCGTTGAAATTCTCTTGCAAGAGCAATTTGTCTACACACAATAAGGGACACAGCAGTGTAAAGCCGTACAGTTGTTCGCAGTGCGGAAAGGGCTTCAAGTGGAAGAGCAACTTGATGGGTCACATGAAGGTGCACACGTGCAACGAGCGCTTCGGCTGTCGCTATTGCGGAAAGACATTCTCGAGCAACGGGAACTTGACGAAGCACGAGATGGTGCACAGCGGCGCGAGACCCTTCACCTGCGACTTGTGTGACAAAGCGTTCTCATGGAAGAGCAACTTAATAAACCACAAGAAAACTCAcaataaagtgaaaaaattaattcagaaaactcaaatataa
- Protein Sequence
- MYVPVYRTGRTLPQKRILQGGSPAPYSTAELFRKYRVLNVRPCPLAILSHFARQARVSAGQVMTSQQQIQNLNLRKLIQAIVKEENENTNDAANVEYKIHVRKANATGQFSQIGNTNVGNEYVAGDYGEPGPSNIQYEQIDQIFIVSGTGEFSELKTVTLDAQQKETTEPDITRGLLSSQLTSLPEVLSSEERETHNCENCRENCRGRCDLKDHAEKNCHSCETCGKVYSLRNALLRHKLTHKEKPYRCEDCGKCFIGKSDLSNHKRVHGQIKPFTCAQCGKGFSAKSSLKVHLSVHNEATHSCDVCGKLFAKECLLKRHKKIHSGLKPYGCDICKKRFLRKFDAINHKLIHSDIKPFICRFCSKAFRLKNACKVHESIHNGGKNPRCKICCEEFSNNSQLAAHMRVHDKKKPIECQKCRKILTFADTPVAHSTDHTEVESVCGECYKTFSSEDERLIAQKNFHSSTEMFTCNKCGDSFVNEHNFTEHKKNYCKKESIINDLKTAGECNEVKKKSVTWKRQMKSLPKYFGCEECGKKCSSKSNLNKHKVIHSGVKGFICDKCGKSFARRGNLREHAKVHSKKYPFYCSKCGKGFIARSSWMKHDNVCCVVNPYVNPGPEKNEFVSKEIQQSDEELDPIRLKGTVEENVDTGDRGETFECDGEKRYRCGECSKIFRKLTLLNRHKKIHKGVRPFVCPECGKSFMRRTDLRDHCMTHSGLRPFECDQCGKTFTAKSNLKKHMLYHMEKKPHRCEDCGKTFTMRSILKYHARVHSNERRYVCEHCGKSFKMKQGLNIHRLTHTGVKRHMCEQCGKTFALKSTLKNHKMTHSEFRAFCCDECGKKFSLKAHLKQHQLRHSLNKSALLQHNGEKQYDCNMCGKRFLTKSRLSGHMNYVHISERNFRCDICGKRFTTSDRLHEHQRIHSNIKPFVCDVCSKGFASKSNMLKHKVIHSTVRPFECAECGKTFLRKGNLKEHERVHRKDKLTRKIKEEDKIFCCEICGNKYLTEQTLGSHKVMHSGKGKTFTCKECGRGFLRKAGLLRHEALHVGSRPFVCGECGKTFPIQFYLARHKKVHAKEKIIKNIKNKRKNASKRNRQKRRFVKSEEKSSSRSEVVIPQIGNVPEIVCLVNAEDTLSLWSDEQGINDTQTIIAIDDSISQQVVIDSENTQTAAIVDESLNLAIDNSQQLSNSNIDNADEPYDSYIQNAEVTLYSETGNANEHFSSERYSVEEPQTLISNINNAEKKIDSDIDKVKKIFICDECGKQFAKGQLLLRHKKTHRAEKPFSCEICSKSFHRKSDLVTHERIHSGEKPHCCELCGKRFSNYSNLKKHMTVHSGEKSFSCEECGKAFKQKTNLTKHRTIHRKNRIHQAFIAAEYGIPVSEMNRMKKDHTVDRIKNETGGSFICEDCGQIFNQKSNLTQHRAVHDASNTFTCTDCGENFTNKSDLQDHANIHLSQEPLSCSICGKTFSKRSVFESHQKTHSKIRPYQCEHCPLKFSCKSNLSTHNKGHSSVKPYSCSQCGKGFKWKSNLMGHMKVHTCNERFGCRYCGKTFSSNGNLTKHEMVHSGARPFTCDLCDKAFSWKSNLINHKKTHNKVKKLIQKTQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -