Basic Information

Gene Symbol
RERE
Assembly
GCA_949825065.1
Location
OX463847.1:24668754-24674219[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-08 4.6e-05 24.4 0.3 2 45 121 165 120 166 0.94

Sequence Information

Coding Sequence
ATGGCCCAAAATCAAGGTGAGGTCCGCGTGAGCGGACCCAATCAGCCCCCGCGGGACATCTACGCGCGGCTACCGGACATGCGGGCGGCGGGAGGTGAGGACGTCAGTCCCGGTGGCGAGGAACTGCGCTGGATGCCGGCGCAAGCCAGCGACCGTGACCTGCTCATGTACCTGCGTGCCGCACGCTCCATGGCGGCCTTTGCAGGGATGTGTGACGGCGGCTCTCCGGACGACGGCTGCGTGGCCGCCAGCCGGGACGACACCACCATCAACGCGTTGGACATCCTGCACGACTCCGGTTACGATCCGGGGCGCGCGCTGCAGGCGCTCGTCAAATGCCCCGTGCCCAAGGGTATTGACAAGAAGTGGTCGGAAGAAGAAACCAAGCGCTTTGTTAAAGGCATCAGACAGTTCGGGAAGAACTTCTTCAGAATTCGTAAAGACTTACTTCCCCACAAAGACACATCGGAGTTGGTAGAATTTTACTACTTATGGAAAAAGACACCCGGCGCTAGCAATAATCGTCCCCACAGAAGGCGAAGGCAAGGGGGAGGATCTCTGAGAAGAATTCGCAATACTCGGGCGGCTCGTGGAGGAGCTCGTGAGCCTCCCGAGGCCCCTCCACAAGATGCAAGGCCTTCACCCACACCTCAAAAGGAACTTGGCGAAACCAGTTCAGTCACCGAAGATGACAACTCTGAAGACGACAGCGATTCCCGGGATGCGGGTGATCTAAATAAATCCGAAGCTAGAGTTACTCCCGATAGTCCCGATGGATCACCAGCTAGAATGAGGACCAGGAATAAAACTAAAGAGCAAACTACTCCCAATTCCAAGCGACGGGATGGGAGTGACCAAGACGATATCaccaaaaataaagtgaaaactcCCAAAACTCCCGCAGGAGCGACAGAGAAGAATCAAAATAATGCTTCAACTGAAAAAGACAAAAAGAAGAGTGCAGTCAATGGAAAAGTTGATGTAAGTAAAGTGAAAAAACGTGTTCCTGATGACTGTGAAATGGATGTGTTGAGTGAAAGTGACTCAGGACTATTCAAGAAAAAACGAGCAGATCGCTCTGATAGTCctacagaaagtttaacaaATGACAGTGGTTCTGCTGTAGATGATGCTGAAAATAATGAACTAGAAAGTGAAATtcctgattttaatttaaataaatctgataTTTCTCAAAATTCTGATGCACATGCCAAATTAGAAAATGGCAACCATGAAAAAGGCGATAACTTTGATAGTGGAATATctcctgaaaataaattagaatttataCACCATTCAGATGTGGATGGAATCCCAAGACACGAATTCATGTTTGATAAGGAAGAAAAGTCTCCGTTGGACGAAATGAAAACCGATCCCCTATCTGACGAATTCTTAGATGTTAAAGAAAATAGTTATAAAACAACTGACATAAAAAAACCTGTAAGTGATCATAAAACAGAACTTATTATACCCAAAGTTGCTTCCCTGAATGTTGAATCTCTTGATAAAGTGAAAATTAAGGAGGAAGTTGATCAGGATGATTCAAACTCTATTGGTCTCAAAAGTGAATATAATATTGATCCTTTAACTCATATGTATCACCCTCAGTCTGTAAACGCTCCAGAAAAATCTTCAATGCATGACATGACGCAAGGTTTTAATTCAGATGGACTTTTCAATcctaatacaaatattaaaatagaaaatccTATGGGCAATCAACATTACACGAATATAAAAgagaacattttaaaacaaggaaAAGATTATCCTGGAGCAATGGGGCCATATGGATACAATCAATCGAGCTTATTGatgaatgaacaaaataaacaaatgcttTCTAATACTATGAGTACAGTCATCAAATTGGAGCCCCGAGATGAATCTGAAGTGAAAGTTTCAAATCAAGCTGAGACTGTTTACACAGCTACCGTAACTAGtggtttaagtgaaaataatggTGCACGGATACCTAGTCCTGGCATGCCACTTAGGACACCTCCTCCAGGACAGGGGCCATTAAATTCCCATCCCAATCATGGGGGAAGAATCAATCCTGAAGCTTCTCCTTCTGCTTTATGCCAAGATTCTGATTCAAACGCTATGAAAGATTTAGATTCATTAGaatctaaacaaaatgaatcgCAAGGTAAAAAATTAGATTTGACTGGAAACAATTCTCGAAATGCATCCATATCAACACCATCGCGTCAAGAAGGCCCTCCATTAAGACTTCCTCTAGTCATTGAAGGACCACCATCTACTACAGGCTCTAGTGCAAATATACCACCAATAACATTATCGCAACCTCTTCCTGGACTCTTACAACAAGGACCTCTGGTATCTATTGGAGGACCTACATCTGTCGTGCCACCATATGGATACATCCCTAGTTCTGTTTACAGTCATCAAGGACAGGCTGTGCATCCTGGTATGGAAAAACTTCCTGGAAACGCTGTTGGGCATTTATTACCACCAATGGTATCGTCTCATAGCAATGTACCACCATTGAGATCATCTCCAAGTTTGCCTCATACATCGGCCGTTGACATGCAAATTCCTCAGGATTTGAAAATCAAACTTGAAGTTTCAGAACCTGTGGGGAGCATTGGATCACAAATTTCACCTGAATCAAATCAAAATCTCTCAGATCCTTTACAATCTTTAAAAGAAGTTAAAGTACCTGGATATTCTGGAAACAATAATACTTTACCACTAACTACACATAATGCTGAGAATCTTTCCACAGTTGAGCCAAGCAGCAATCGTCCACCCAGCAGACCACACAGCAACAGTGGTTCTCTGCCTGGACCATTCTTAGGACCAAGaatagataatattaaaaaagaaccaGAGTTTGCACAGCAACCATCTAACCAAAATATCCCAAGTCAGGGTAACATGGAAGCTCCCATAGCACCCACTCCAATAAAAAGCCCTCACACACCTACACCCATCAAAATGCAAATACCGAGTTTGCATTCAAATTCTAGTAGTATGTCAACCACTCCCCCTTTCTCCAGACATTTGACAAGTCCATCTCAATCACGACAAATATCATCATCTCCTTTGTCACAACCTCCTGtatcacattcggctttaaatttaatgaatccTACTCCTTTAACTATACCTGCCACCATTCCAGGTCCAGTTATGCATTCTTCTCAACAAGGTCCACATCCTCATCCATTCCCATCTCCTTTGCATCATCCTCACCATCCTTTACTGCACCATTCGCTATTTGCTGCTGCTGCAGCTGCTCACGCTTCCATGCATCCGTACTACCCACATCCTCATGCTGGGTACGCAATGCCTTATCCATATCCCTATGGACCTTTGCCTCAGCCACACCCTATTCCTCCAATGCACAACCCCCCTGTTAGCACTCCTGGCAGGCACGAGTCTCCATTATCTCTCAACAAACCGACAGCAATAGAATCAACCACTATGATGACATCTCATCACAGTTCAAGTTCATCTGTAACTACCAGATCATTGAGAGAGATTTCTGAGACTACGGAAGACCTTAGAAATCCAAATGGAGCAACTGAACGACATCAAATGCATGAAACACTTTTAACACAGCATCAATCAACAAGTCATCATAGCTCTGTGCATGCCAGTACTGAGAAACATCCTAATCAAGCGGGAGCTAATCATTCTTTGACGATTTCGCATTCCACTTCCAGTAGTTCATCTCAGTCTAttcaacataaaattaatacacagcAGAAACCTGTACATACTAGCTCTCCTCACAGCCATTTATCAGCTAGTGTATCTCAAACTACAAGTACTTCATCTAGTATAAATATGGCTAATACTCACCATCATTCTCATCACCATTCACACCATCATGGAAGACTATCTCCTGCTGACCAAATGCTAATGCGCCATCATCCAAAGTTATTGCCGGGCAATGCTGGAAATTCACACCATCTCATGATACAACCTCCGACTTTGGGTCACCACATGCCTCTGGGAATGCCTCCTGGTCCGGGAACTAACTCTCTAGAAAGTTTGAGAATGCATGCACAGGCTGCAGCAGGGCTTCCACAGCATCCCAAACCCAGTTCTCCTCATTCTATGCCTTTAGGACATACCTTACACAGACAAGGTCGTCCTTTGCAAGAAGACTCTTTAGAAGGACCCATATTAAAATTAGAAACACCACCACAACcaccagaagaagaagaaatcccAAGTCCTGCACATATTCCACACGGTCCCTCTCCTGAACCTAAAGTAGAAGACTCAGAATGTCATCGATCACAATCAGCAATATTCCTGCGGCATTGGAATAGAGGTGATTATAATTCATGCACACGTACTGACTTAATTTTCAAGCCTGTCCCTGATTCTAAACTTGCCAGAACAAGAGAAGAGAGGTTAAGAAAACAGGCTGAAAGGGATAgggaagaaagagaaaaaattgCTCAACAAGCACATGCTAGAAAAATTTCTACACCTGAAAAACCAGACACCAAACCTCCATCTCGGGGTGCTATAGAAAGTGTCCCATCTCCTTATGATAGGTTTCCTCGCCAAGGCTATCCAGATACTCCTGCCTTGCGCCAGCTTTCAGAATATGCTCGTCCTCATGCTGGATTCAGTCCGGGAAATATTCCTCGACATTGCATGGATCCTATGTTACAGTATCAATTGAGTTCTATGTACGGACCGGGTGTAGCTAGAGAGCGCTTGGAATTGGAACATTTAGAAAGAGAAAAGCGAGATAGGGAGATAAGAGAACTAAGAGAAAGAGAGCTTAATGACAGACTTAAAGAAGAACTACTTAAGAATAGTAATGTTGGAGCCAGAATGGATCCCCATTGGTTAGAAATGCATAGACGCTATGGGGTTCCTCCTCCACAAGGCGGGATTCCTCTTCACCAATTGGGACTCTACGGAGCTGGTCCCGGGCAAGCAGCACTCTCCCAATTAGAACGAGAGAGACTGGAGAGGCTAGGCATCCCCCCTCCGGGAGGACCTCCACCCTCGCACCCACATCATCCCCATCATCAGTTGGAAGCTGCTGAACGTCTGGCATTAGCCACAGATCCGATGGTACGACTGCAGATGGCGGGCATTAGTCCAGAGTACCATGCCCATACTCATGCTCATACGCATGCGCATTCACACACACATTTACACCTACATCCTGGGCAACAAGCAGCTGCAGCAGCCCAGCAAGACAGCTGGGAGCGACGGCTGGCTCACCCTGAGCTGCTGGCTCGACCGTATGCAGAGCAACTGGCGCAGCAAGCGGCAGCACATGATCAGTTACAACGGCACCTGCTGATGGAGCGCCACCACCATCCGCACGCCCATCCACACTCGCACCTGGGCCCTGCGCCTCCTCCCAACCCCGAAGACTTCCTACGCCACCAACAACGCGACCGGGAGCTCAAGGTGCGCGCCTTAGAGGAGGCGGCCAGGGCTGCTCGTCCTTAA
Protein Sequence
MAQNQGEVRVSGPNQPPRDIYARLPDMRAAGGEDVSPGGEELRWMPAQASDRDLLMYLRAARSMAAFAGMCDGGSPDDGCVAASRDDTTINALDILHDSGYDPGRALQALVKCPVPKGIDKKWSEEETKRFVKGIRQFGKNFFRIRKDLLPHKDTSELVEFYYLWKKTPGASNNRPHRRRRQGGGSLRRIRNTRAARGGAREPPEAPPQDARPSPTPQKELGETSSVTEDDNSEDDSDSRDAGDLNKSEARVTPDSPDGSPARMRTRNKTKEQTTPNSKRRDGSDQDDITKNKVKTPKTPAGATEKNQNNASTEKDKKKSAVNGKVDVSKVKKRVPDDCEMDVLSESDSGLFKKKRADRSDSPTESLTNDSGSAVDDAENNELESEIPDFNLNKSDISQNSDAHAKLENGNHEKGDNFDSGISPENKLEFIHHSDVDGIPRHEFMFDKEEKSPLDEMKTDPLSDEFLDVKENSYKTTDIKKPVSDHKTELIIPKVASLNVESLDKVKIKEEVDQDDSNSIGLKSEYNIDPLTHMYHPQSVNAPEKSSMHDMTQGFNSDGLFNPNTNIKIENPMGNQHYTNIKENILKQGKDYPGAMGPYGYNQSSLLMNEQNKQMLSNTMSTVIKLEPRDESEVKVSNQAETVYTATVTSGLSENNGARIPSPGMPLRTPPPGQGPLNSHPNHGGRINPEASPSALCQDSDSNAMKDLDSLESKQNESQGKKLDLTGNNSRNASISTPSRQEGPPLRLPLVIEGPPSTTGSSANIPPITLSQPLPGLLQQGPLVSIGGPTSVVPPYGYIPSSVYSHQGQAVHPGMEKLPGNAVGHLLPPMVSSHSNVPPLRSSPSLPHTSAVDMQIPQDLKIKLEVSEPVGSIGSQISPESNQNLSDPLQSLKEVKVPGYSGNNNTLPLTTHNAENLSTVEPSSNRPPSRPHSNSGSLPGPFLGPRIDNIKKEPEFAQQPSNQNIPSQGNMEAPIAPTPIKSPHTPTPIKMQIPSLHSNSSSMSTTPPFSRHLTSPSQSRQISSSPLSQPPVSHSALNLMNPTPLTIPATIPGPVMHSSQQGPHPHPFPSPLHHPHHPLLHHSLFAAAAAAHASMHPYYPHPHAGYAMPYPYPYGPLPQPHPIPPMHNPPVSTPGRHESPLSLNKPTAIESTTMMTSHHSSSSSVTTRSLREISETTEDLRNPNGATERHQMHETLLTQHQSTSHHSSVHASTEKHPNQAGANHSLTISHSTSSSSSQSIQHKINTQQKPVHTSSPHSHLSASVSQTTSTSSSINMANTHHHSHHHSHHHGRLSPADQMLMRHHPKLLPGNAGNSHHLMIQPPTLGHHMPLGMPPGPGTNSLESLRMHAQAAAGLPQHPKPSSPHSMPLGHTLHRQGRPLQEDSLEGPILKLETPPQPPEEEEIPSPAHIPHGPSPEPKVEDSECHRSQSAIFLRHWNRGDYNSCTRTDLIFKPVPDSKLARTREERLRKQAERDREEREKIAQQAHARKISTPEKPDTKPPSRGAIESVPSPYDRFPRQGYPDTPALRQLSEYARPHAGFSPGNIPRHCMDPMLQYQLSSMYGPGVARERLELEHLEREKRDREIRELRERELNDRLKEELLKNSNVGARMDPHWLEMHRRYGVPPPQGGIPLHQLGLYGAGPGQAALSQLERERLERLGIPPPGGPPPSHPHHPHHQLEAAERLALATDPMVRLQMAGISPEYHAHTHAHTHAHSHTHLHLHPGQQAAAAAQQDSWERRLAHPELLARPYAEQLAQQAAAHDQLQRHLLMERHHHPHAHPHSHLGPAPPPNPEDFLRHQQRDRELKVRALEEAARAARP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01012246;
90% Identity
-
80% Identity
-