Oalb001186.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- -
- Assembly
- GCA_949825065.1
- Location
- CATKWJ010000895.1:21045-22457[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-08 3.9e-05 24.3 0.0 2 41 11 50 10 54 0.91 2 2 4.1 4.1e+03 -1.4 0.0 21 28 297 304 297 304 0.89
Sequence Information
- Coding Sequence
- ATGACAAAACGTCAGTATAACACATGGTCCAAGGAGAATATGGAAGAAGCTATCAAGATGTATAGTGAcggaaaattaaaattcaacgaAATGTGCCGGAATTATAAAATTCCAAAGCCAACATTCCGACGACACTTGAAGAATCTGAATACTTACGAAACTAACGGAAGACCCAAATACTTAACAGAAGACATGGAAAACGAATTAGTTAAACATATACTAGAACTAGAATCTAGTTTTTTTGGACTGACAATTAAAGATTTTCGCTACTTGGCGTACCAATTAGCTGAAAGATATAAACTTCCGCACAGATTTAATAGAGACACTCAGTTAGCTGGTTGGAAGTGGTACTATAACTTTTTAAAGACCCACCCGGAAATATCATTGAGAACTCCTGAAGCAACATCAATGGCTCGGTGCaaaggttttaataaaaaaaatgtgacggATTTCTTTGACAAATATGAAAAGATTGTAGATATATTCAAATTTACAGGGAGCCACATATATAACGTCGATGAACCGGGACTCAGCACTGTACACAAGCCATCTaaaattttagcaaaaaaaggaaaacatcaAGTAGGGGCATTGACAAGTGGAGAGCGAGGAACGAATACAACGTGTGTTTGTTGTATGAATGCTGTAGGTGAATTCGTACCTCCAATGCTCATATTCAAAAGGAAAAGGATGACAGACGATCTGACAAGAGGAGGTCCACCTAACACATTATACACTTGCTCTGACAGTGGATGGATTACATCTGGTTTATTCCTACAATGGATGGAACATTTTATTAAGTCTGTCAGGTTACAGAAATCAGATGAAAAGCAAGTGTTGCTAATACTAGATGGGCATTCGacccatacaaaaaatatcgacgcaattCATCTTGCCAGAGAATATGGAATCATTATGCTTTCCTTGCCAGCTCACACATCCCACAAACTTCAGCCCCTGgacaaatcattttttaaatctttgaaattaaaatataacaaggcaagcgaaacttggatgCGTACGCATCCAGGAAGTTTAATCAAACAGTCGAATGTGGCAGGAATTTTAGGAGACGCCTACCCACGAGCTGTGTGCATGGAAACTGCATTGCATGGCTTCGAATCGTGTGGTTTGTGGCCATGTAACCGTTTTCAAATAAGGGATGAAGAATTTGTACTTATAAATGACACCAAAGAAACTGATGAAATACCGTCAAGATCAGACACATACACTCgcaatgatatttcaaataacacaGTCTTGCATATTCCACAGATTTCCGCACCACAACTAACTGATGAACAGTGTAATTCTCCTGAAATTTCACATCAAATTTGTACGTCAACCATAAGGTCTGAAATTGAACACCTGTcacacaaaattcaaataacagcgacacaaaataaatga
- Protein Sequence
- MTKRQYNTWSKENMEEAIKMYSDGKLKFNEMCRNYKIPKPTFRRHLKNLNTYETNGRPKYLTEDMENELVKHILELESSFFGLTIKDFRYLAYQLAERYKLPHRFNRDTQLAGWKWYYNFLKTHPEISLRTPEATSMARCKGFNKKNVTDFFDKYEKIVDIFKFTGSHIYNVDEPGLSTVHKPSKILAKKGKHQVGALTSGERGTNTTCVCCMNAVGEFVPPMLIFKRKRMTDDLTRGGPPNTLYTCSDSGWITSGLFLQWMEHFIKSVRLQKSDEKQVLLILDGHSTHTKNIDAIHLAREYGIIMLSLPAHTSHKLQPLDKSFFKSLKLKYNKASETWMRTHPGSLIKQSNVAGILGDAYPRAVCMETALHGFESCGLWPCNRFQIRDEEFVLINDTKETDEIPSRSDTYTRNDISNNTVLHIPQISAPQLTDEQCNSPEISHQICTSTIRSEIEHLSHKIQITATQNK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086229;
- 90% Identity
- iTF_01086229;
- 80% Identity
- -