Oalb011609.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- -
- Assembly
- GCA_949825065.1
- Location
- OX463844.1:30964203-30965960[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-09 7.7e-06 26.5 0.0 2 41 11 50 10 54 0.91
Sequence Information
- Coding Sequence
- ATGACAAAACGTCAGTATAACACATGGTCCAAGGAGAATATGGAAGAAGCTATCAAGATGTATAGTGAcggaaaattaaaattcaacgaAGTGTGCCGGAATTATAAAATTCCAAAGCCAACATTCCGACGACACTTGAAGAATCTGAATACTTACGAAACTAACGGAAGACCCAAAGACTTAACAGAAGACATGGAAAACGAATTAGTTAAACATATACTAGAACTAGAATCCAGTTTTTTTGGACTGACAATTAAAGAATTTCGCCACTTGGCGTACCAATTAGCTGAAAGATATAAACTTCCGCACAGATTTAATAGAGACACTCAGTTAGCTGGCTGGAAGTGGTACTACAACTTTTTAAAGACCCACCCGGAAATATCATTGAGAACTCCTGAAGCAACATCAATGGCTCGGTGCaaaggttttaataaaaaaaaatTCGACAAAAGAATttctatttatatatgtaataactGCAAGATTTGA
- Protein Sequence
- MTKRQYNTWSKENMEEAIKMYSDGKLKFNEVCRNYKIPKPTFRRHLKNLNTYETNGRPKDLTEDMENELVKHILELESSFFGLTIKEFRHLAYQLAERYKLPHRFNRDTQLAGWKWYYNFLKTHPEISLRTPEATSMARCKGFNKKKFDKRISIYICNNCKI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086218; iTF_01086219; iTF_01086221; iTF_01086223; iTF_01086222;
- 90% Identity
- iTF_01086221;
- 80% Identity
- iTF_01086218;