Oalb033003.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- UBE2J2
- Assembly
- GCA_949825065.1
- Location
- OX463866.1:12971178-12985591[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8 7.7e+03 -2.3 0.0 23 28 89 94 69 106 0.74 2 2 8e-09 8e-06 26.5 0.0 5 39 225 259 222 264 0.88
Sequence Information
- Coding Sequence
- ATGACCTCCAACCGTAGCACGGGCGCGACCAGCCGTCTGAGGCAGGACTACCTCCGTCTCAAGGCGGATCCCGTGCCTTATGTGGTGGCCGAACCCGTTCCGTCCAACATTCTCGAGTgtTTGGACTCACAAGAACTGAGGGGATCGTCCGTCAGGATGAAAAAAGACACGATCAAACGAAGACGATATGTCAACACGCCAAAAGAACGCCTGGACATGGCATCCAAAGCCGTACGCTTTCGGAGGATGGAGATAACCACAGTTGCTAGACTATATGGCATTCACGAGACCATCCTTAAAGAGAAAGCTAATAACATTAGAACGAGACGGAAGATTCAACCGAGAATAAAAGAAAGTAAACCTTTAATAGCCGAAAACCGTGTGGAAAAGAGTAACGAGTATATTATCAAACTTCTTGATACGTTGTTTGAAGAATCCTCTTTAATCGATTTGACCGAAGATCGAGTGATCGATaatggaaaattttctttttcggACTTGCAAGATCCATTGGCGACGAAAAATGCTGCTGTAAACAGTGTTGATGATATTTTCAAGGAATTGAGTTGTACGAATGATGatgttcaaaaaaatttaacgtACATTGGTGGACAACAAGTTTCCAAAACGAAACGTAAAGTCCGACGGTACAATAGCACACCGAAAGAATTGTTAGACAAAGCTTTGAAACAAATTAGATCTggcaaaataaacatttcgaaGGCTtccatattatacaatatatcttcAGGAACACTAAGCAACAAGTTACGTAACAAACATTCGAACAAATGCGGACCTCCAATAGCTTTAACGTCAGGAGAGGAAAAAGCGTTGATCGAATACATCAAAACTGTTAGAGATTGGGGTCGTAAGTTTACGTTCTTTGATGTCCGTTGTCTAACGAAAAATTATTTGGATACAGCCGGACGTCATGTGAAGAGATTCGGCAAAGACAATATGCCTGGACGAGACTGGGTTGTTAATTTCTTAAAACGAAACAACCTAGACCTGAAACAGACACGCTACTGCAGTACCGAAAAATTAGACTATATAAATTCAGCGTTTACAgagtattatgaaaaattaagagCTGCTATACAAGAGAGTGAAAATAGCGTTGTTCCGCCTGAGAGAATATTCTGTTTCGAAGAATACAATTTGGTACGTgacattgaattgaaaaaactcatttttaaaAGAGATTCTTCATATCCCGTTTATATGAGAGACAGTTTAGATGCGTGTGTGTTACTAATGCTTTGTGGCAGCGCTTCGGGTGTTTTGCTTCCTCCCTACGTAGTCTACAAGTCTGATATTGTACAAGTGCCTTGGATCGAAGGTGGGCCTTCAAACGTTCACTACAACTGCCGCGAAGTTCCGTGGTTCGATCAGAAACTCTTCAAAAGCTGGTTTCAACAGAATTTCTTGCATCATTTGAAATACCTCACCGGAAGGGTGGTCTTAATCGGGGAAAAGCTTTCGAGATACGTAAAACCTGAATTCGAAGCTTACCTTAAAGGTCAAAATATCTACATGGTCAGCGTGCCTACAGAGTTGAAGTCATTCTGTTTTCCGATGCAGTTTGCGTTTTCTAAAAAGCTCGAATCCAATTGGAGAATGGCGCTTTCTGCTAAAAGGAAAGAGTCGTACTTTAACGAACTGCCGTTAGATATGTTCCCGAAAGTTTTTAAACGTCTCCACGAGAGATTGTACAATTCGGACGATACCAAAGAGAAACTCGTGCAGAGTTTTCGCAGAGCAGGTGTTGTGCCTTTGGACTCCAACGTAGTTTTGTCTCAAGTACAGAGCCACAGTGACCAGGATCTGACTGACAGTGATACCAGTGTCTTGGATGATGATTTAGTTCTATTGattgtttag
- Protein Sequence
- MTSNRSTGATSRLRQDYLRLKADPVPYVVAEPVPSNILECLDSQELRGSSVRMKKDTIKRRRYVNTPKERLDMASKAVRFRRMEITTVARLYGIHETILKEKANNIRTRRKIQPRIKESKPLIAENRVEKSNEYIIKLLDTLFEESSLIDLTEDRVIDNGKFSFSDLQDPLATKNAAVNSVDDIFKELSCTNDDVQKNLTYIGGQQVSKTKRKVRRYNSTPKELLDKALKQIRSGKINISKASILYNISSGTLSNKLRNKHSNKCGPPIALTSGEEKALIEYIKTVRDWGRKFTFFDVRCLTKNYLDTAGRHVKRFGKDNMPGRDWVVNFLKRNNLDLKQTRYCSTEKLDYINSAFTEYYEKLRAAIQESENSVVPPERIFCFEEYNLVRDIELKKLIFKRDSSYPVYMRDSLDACVLLMLCGSASGVLLPPYVVYKSDIVQVPWIEGGPSNVHYNCREVPWFDQKLFKSWFQQNFLHHLKYLTGRVVLIGEKLSRYVKPEFEAYLKGQNIYMVSVPTELKSFCFPMQFAFSKKLESNWRMALSAKRKESYFNELPLDMFPKVFKRLHERLYNSDDTKEKLVQSFRRAGVVPLDSNVVLSQVQSHSDQDLTDSDTSVLDDDLVLLIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -