Oalb008459.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- -
- Assembly
- GCA_949825065.1
- Location
- OX463842.1:16663206-16663565[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-09 2.3e-06 28.2 0.0 2 44 11 53 10 54 0.92 2 2 7.5 7.4e+03 -2.2 0.0 21 30 94 103 94 104 0.83
Sequence Information
- Coding Sequence
- ATGGCAAAACGTCAGTATAACACATGGTCCAAGGATAATATGGAAGAAGCCATCAAGATGTATAGTGAcggaaaattaaaattcaacgaAGTGTGCCGGAATTATAAAATTCCAAAGCCAACATTCCGACGACACTTGAAGAATCTGAATACTTACAAAACTAACGGAAGACCCAAAGACTTAACAGAAGACATGGAAAACGAATTAGTTAAACATATACTAGAACTAGAATCCAGTTTTTTTGGACTAACAATTAAAGATTTTCGCCACTTGGCGTACCAATtagctgaaaaatataaacttccGCACAGATTTAATAGAGACACTCAGCTGGTTGGAAGTGGTACTGTAACTTTTTAA
- Protein Sequence
- MAKRQYNTWSKDNMEEAIKMYSDGKLKFNEVCRNYKIPKPTFRRHLKNLNTYKTNGRPKDLTEDMENELVKHILELESSFFGLTIKDFRHLAYQLAEKYKLPHRFNRDTQLVGSGTVTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01086213;
- 90% Identity
- iTF_01086213;
- 80% Identity
- -