Oalb001952.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- -
- Assembly
- GCA_949825065.1
- Location
- OX463838.1:15229672-15235810[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.7 9.6e+03 -2.6 0.0 27 36 59 68 59 69 0.84 2 2 1.1e-14 1.1e-11 45.2 0.0 3 42 286 326 284 329 0.94
Sequence Information
- Coding Sequence
- ATGTATTATGGTGAAGTAAATGTATCACAGGAACAATTGCCACCTATATTGGAGGCAGCTaaaatgctaaaaataaaaGGCTTGACAGAAATGCCTGAACCTTCTTTAAATAACCCCAACGGGTCTACGGAAAGACCGAATCTTCTCACTCCAGGACAGTCTTCATGGCATTCTGATATTCCACACGATTCACTATCAGCATGTAATTTGTCTCCAACTAACAGGCAAAACAGACATAGAAAATCTTCTAGGTCACTTTCAAGAGAAAGGAATGAAGAATTGATGTCAGATGAGGCAAATAATTTATCTATGACCCGGCAAGAGGAGATTAGTTACAATAACATGAATTTGCCAAATCCCTTTTGTGCAAAATCTAGACCCAAAGAGCAACATTTTACTGAATATAATGCTTCTAAAGACAGTTTTGACGAAAACGGTCCAATGGAAGGCAATCTTATCATAGACGCAGAAGAAGAACCGAACGATTGTAATTTGATGAGAGTGTCGGATCAACTAGAACCTACTGGTGTTGGAACTCCTGAACAAGGCTCCCACTGGGCCATTATGAATCATGACTATCCAAAATACACAGGAACAACACCAGatcaatcaaataatattcatgGACTCCCTGGCATCAACATGAATTCTATTCAGGACGCTTCGTTGCATAATTTTGGCATACAGTCGATGATTAATCCATATCAATATTCAAATGAACACCAAACTCAACAGAATGCTGAAACTAGTGGGAACTCTCCAGGACCCTCTTGTTCTAATGCAACACAATTTATGAATCAAGATAATCTACAAAATCTTACCAAAAAACGTCGGAGAACAAATCCCCAATCtggtgaaaattttcagcatgcTCTGGAAGCAGTAAGAATCGGAGGCATAGGGTTTTGTAAAGCGGCTAAAATGTACGGAGTCAACAATCGTACATTATGGCTCGAGTATAAGAAGTTAGGATATCCTATTAACAGGGCTAGTATAAAAAGTCGGATAAAACAAGAACATTCATCTCCACCCCCTGAAATGAGAGAAGAAAACATGGTCAATATTCCTGATCAACAATTTGCTTTACTGTGTCCACCTCATCCTAGCGGTATAATGGGATTTATTGATTCACGACATGTAGACTTTGCATCCGGAATGCAAAATATTAATCGGCCGAGGTTTGTGGAAGACCCTATGAACCTACATAATCCGCCTTTGAATTTGCATGgtgtaaattttaatacaatgcaataa
- Protein Sequence
- MYYGEVNVSQEQLPPILEAAKMLKIKGLTEMPEPSLNNPNGSTERPNLLTPGQSSWHSDIPHDSLSACNLSPTNRQNRHRKSSRSLSRERNEELMSDEANNLSMTRQEEISYNNMNLPNPFCAKSRPKEQHFTEYNASKDSFDENGPMEGNLIIDAEEEPNDCNLMRVSDQLEPTGVGTPEQGSHWAIMNHDYPKYTGTTPDQSNNIHGLPGINMNSIQDASLHNFGIQSMINPYQYSNEHQTQQNAETSGNSPGPSCSNATQFMNQDNLQNLTKKRRRTNPQSGENFQHALEAVRIGGIGFCKAAKMYGVNNRTLWLEYKKLGYPINRASIKSRIKQEHSSPPPEMREENMVNIPDQQFALLCPPHPSGIMGFIDSRHVDFASGMQNINRPRFVEDPMNLHNPPLNLHGVNFNTMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -