Oalb012890.1
Basic Information
- Insect
- Odontocerum albicorne
- Gene Symbol
- -
- Assembly
- GCA_949825065.1
- Location
- OX463845.1:24847883-24867130[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.2e-10 2.2e-07 31.5 0.0 4 39 202 238 199 242 0.89 2 4 4.9e-11 4.9e-08 33.6 0.1 2 39 254 291 253 294 0.93 3 4 2.6e-15 2.6e-12 47.3 0.0 2 45 309 353 308 353 0.97 4 4 5.6e-18 5.6e-15 55.8 0.0 1 42 360 402 360 403 0.95
Sequence Information
- Coding Sequence
- ATGACGGGCCACCCAGATTCCCCGACACAATCCCCCGGGGTGGGACCGCGGGCGGCCGGAGAAAGAATGGGGCCATCTGGTCAGGAAGAAGCCATGCATCCACAGCAGAGTCCTCTAATACATGCATTTCAAAATGTTGGTGTTATAACTGAATCAGTGAATTGTATAGAATCCGATTACGCCCTTCCTGTTCCAATGGCTCCCGTGGCGACTCCAGTACAAGTCCAGTCAGTCTCAGCTGATACCAATAGTTCATCCCTGCTTCAACAGAGCCCTGACTGTGCAAATGATTCTTTATCTACAGATTTCAAAAATAAGTTTGAAACATTACGCTCGCTAGAACAACAAACAACATTAGACATGGATACGCATATTTGTCATCAACAAACAAgggatgaaattatttcaaatgatcaGTGTGCAACTGCAgacatgcagaaaaataatatggAAGGACAAGATTCTAATAGAGAAGAAGCTTCCAATATTGAAGATGGTAATGAGTCGAGTCAGGAGCTGTCTTCAGATGGCATGGGACATAGCACGATGggatattcaaatttaaatatcctTGGAAATGCACCAAAAACGTGGACACAACAGGATATGGAAAATGCCTTAGATGCTTTAAGAAACCACAACATGAGCCTTacaaagGCTTCAGCAACTTTTGGAATACCTTCTACTACCTTATGGCAGAGGGCTCACAGATTAGGGATTGACACTCCCAAGAAAGAAGGACCATCAAAATCTTGGAGTGAAGGAAATTTACACAGTGCTTTACAGGCCCTTAGGACAGGAACCATTTCAGCAAACAAAGCCAGCAAAGCTTTTGGTATCCCAAGTAGTACTCTATACAAGATAGCTCGCCGTGAAGGCATAAGATTAGCAGCTCCTTTCAATGCAGCACCAACAGCTTGGAGACCAGGAGACCTGGAGAGAGCGCTGCAATCTATAAGATCTGGTCATTCTTCTGTACAGAGAGCTTCCACTGAATTTGGCATTCCAACAGGAACTCTATATGGAAGATGTAAAAGAGAAGGTATAGAGCTTTCAAGATCTAATCCTACCCCATGGTCTGAAGATGCAATGGGAGAAGCATTGGAAGCTGTTAGAGTTGGTCAGATGTCCATAAACCAGGCAGCAATCCATTACAATTTGCCATACTCATCACTCTACGGGCGCTTTAAAAGATGTAAATATGAAGGTGATCCAAATGGAACAATGGAAATGTCTCAGCACATACAGGATCACAATGCGCCTCATCATAAGTATTCCACTGGAGTTGACCTTGCTAATACCATGTCCTATCACTTTTCCCCCCCTGATGCTCCTCATCCCACTCTTGCATTGAAATCAGCCAGGAGAAAGAATTAA
- Protein Sequence
- MTGHPDSPTQSPGVGPRAAGERMGPSGQEEAMHPQQSPLIHAFQNVGVITESVNCIESDYALPVPMAPVATPVQVQSVSADTNSSSLLQQSPDCANDSLSTDFKNKFETLRSLEQQTTLDMDTHICHQQTRDEIISNDQCATADMQKNNMEGQDSNREEASNIEDGNESSQELSSDGMGHSTMGYSNLNILGNAPKTWTQQDMENALDALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKEGPSKSWSEGNLHSALQALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTAWRPGDLERALQSIRSGHSSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYEGDPNGTMEMSQHIQDHNAPHHKYSTGVDLANTMSYHFSPPDAPHPTLALKSARRKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -