Basic Information

Gene Symbol
Kdm5
Assembly
GCA_949825065.1
Location
OX463844.1:6473117-6475522[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.3e-21 2.3e-17 64.2 0.0 2 88 93 175 92 176 0.91
2 2 5.2 1.9e+04 -2.9 0.1 78 88 774 784 758 785 0.80

Sequence Information

Coding Sequence
ATGGATTGGGAAACAATTCAACGAAATATGTATGCCTGTCGCAATGGGTTCGATTTTGTTCCTCCACCCGAGGCTCCCGTATTCGAACCCACTGTGGAAGAATTCGCCGACCCGTTgggatatattaataaaatacgaCCTATCGCCGAAAAAACtggaatatgtaaaattaagCCACCCACCCGATGGTCGCCTCCTTTTTCCTTAGATGTAGATAAACTTAAGTTCACCCCGAGAGTACAAAAACTTAACGAATTGGAGGGTTTGACGAGGGTGAAACTGAACTTTCTTGATAAAATAACCAAGTTTTGGGATTTGCAAGGCCATCCCTTAAAAATCCCCTGTAACGATGGAAAAAAATTGGATCTGTTTAGTTTGTACCAACTTGTAAAATTGGAAGGTGGCATCGATAAGTGCACATCCGACAGAAAATGGAGGAAAGTTTCTTCATTACTTGGGTACAACCATGGCCCCCTTTCCCTGGAATTTGTGAAGAGTAATTATGAGAAAATTTTGCTGCCATTTTATgagtttaatgaaaaaaatattcagctgAAAGCTGAAAATAAACTGAACGCTGATAATCGGATAAAAGACGAAAATGATTCTAAAAGTGATATAATTACCGCAGTTAAAATTGATGCTGATTCTTACAGCCTTGCACCATGTTCCAGAGGTCTGAAACCAAAAATTGGATTAAATACAAATGAGGAGACCGATGTAGATGATAAATGTAATCGAGAATTAAAAAGACTTCAGTGTTATGGTGCTGGACCTAAAATGCCCGGATGTAACGTGATACCTTCGATAAATGATGATAATTTAGGGAAATTTCGAAAGAGGATGAAACATGAGATTGATCCATTAGCTATTTATCACTGTGCTATATGTAAAAAAGACAACCGAGACAATGAATTACTTGTGTGTAATGGATGTTCAGACACATATCACACGTTTTGCTTGAAGCCACCATTGAAGCAGGTACCCGAAGATGATTGGCGTTGCTTAAGTTGCATAGCtgacgaaataaaaaaaccagATGATGGTTTTGGATTTTTTCAGGCAGAAAGAGAATACACATTACAAGAATTTGGAGAAATGGCTGATTCATTcaagaaagaatatttcaatatgGATAGCCATTCTGTACCCACCGTATTAGCAGAGAGAGAATTTTGGAGACTTGTATCATCAGTGGATGAAGATGTTGTTGTTGAATACGGAGCCGATCTTCACTCCATGGACCATGGATCAGGGTTCCCTACTAAATcatctataaatttatttcctgGTGACCAGGAATATGTAGAATCTGGATGGaatctaaataacttgccaaTCTTGGATGGTTCtgtattaaaattcataaatacagATGTTTCCGGAATGACAGTGCCATGGATGTATGTTGGCATGTGTTTTTCAGCATTCTGTTGGCATAATGAAGACCACTGgagttattcaataaattttctacATTGGGGTGAGCCTAAAACATGGTATGGAATCCCTGGAAGTAGTGCGGAACTATTGGAAAAGACTATGAAATTGGCAACGCCTGAATTATTTAAATCTCAACCAGATCTCTTACATCAATTGGTTACAATCATGAATCCTAATATCCTGACTGATGCTGGAGTACCTGTGTATAGAACAGACCAAAATGCTGGAGAGTTTATTGTTACATTCCCAAGATCATATCATGCCGGTTTCAATCAAGGATACAATTTTGCCGAAGCCGTAAATTTTGCTCCACCAGATTGGCTGCCGATCGGCAAAGAATGTGTGCTGCAttacaagaatttaaaaaggttttgcGTATTTTCTCATGATGAATTGATTTGCAGAATGGGACTAGAAGGCGACAAATTAGATTTAGCCGTTGTTATACCCACATACAAAGAATTAGCTTCTATGGTAGATACGGAGACAAAACAACGAGGGTTGTTAGCTGAGCGAGGAGTTAAGCGTGCCGCCCGTAAATCTTTTGAGAAGCTTTCCGATGATGAGCGTTTGTGTCAGTCCTGCAAAACGACATGTTTTCTCTCTGCCCTGACGTGTGACAATTGCCCCCACATGGTGTGTTTAGACCACACTTTTGATTTGTGTAAATGTCCGGCTGACCAGCTAGTTCTACATTATAGGTATAATTTGgatgaattaaatataatgttgCAGTCCCTTAAATTTAGAGTACAAAGCTTTGATAAGTGGATGACAGAAGTGAAAACAATACTATCTACGTCGTTATCACGACGTGGTCGgacagaaaaattaaaagacttAGCAGAAGAGGCTGAAGAGCTTAAAATTCCCAGATGCAAACTGTATCAAAAATTATTAGAGGAATACAAGAAAGCGAGTCAAGTCTGTGAGACTGTAATTATAGAATTAGACGATGATTAA
Protein Sequence
MDWETIQRNMYACRNGFDFVPPPEAPVFEPTVEEFADPLGYINKIRPIAEKTGICKIKPPTRWSPPFSLDVDKLKFTPRVQKLNELEGLTRVKLNFLDKITKFWDLQGHPLKIPCNDGKKLDLFSLYQLVKLEGGIDKCTSDRKWRKVSSLLGYNHGPLSLEFVKSNYEKILLPFYEFNEKNIQLKAENKLNADNRIKDENDSKSDIITAVKIDADSYSLAPCSRGLKPKIGLNTNEETDVDDKCNRELKRLQCYGAGPKMPGCNVIPSINDDNLGKFRKRMKHEIDPLAIYHCAICKKDNRDNELLVCNGCSDTYHTFCLKPPLKQVPEDDWRCLSCIADEIKKPDDGFGFFQAEREYTLQEFGEMADSFKKEYFNMDSHSVPTVLAEREFWRLVSSVDEDVVVEYGADLHSMDHGSGFPTKSSINLFPGDQEYVESGWNLNNLPILDGSVLKFINTDVSGMTVPWMYVGMCFSAFCWHNEDHWSYSINFLHWGEPKTWYGIPGSSAELLEKTMKLATPELFKSQPDLLHQLVTIMNPNILTDAGVPVYRTDQNAGEFIVTFPRSYHAGFNQGYNFAEAVNFAPPDWLPIGKECVLHYKNLKRFCVFSHDELICRMGLEGDKLDLAVVIPTYKELASMVDTETKQRGLLAERGVKRAARKSFEKLSDDERLCQSCKTTCFLSALTCDNCPHMVCLDHTFDLCKCPADQLVLHYRYNLDELNIMLQSLKFRVQSFDKWMTEVKTILSTSLSRRGRTEKLKDLAEEAEELKIPRCKLYQKLLEEYKKASQVCETVIIELDDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-