Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_949825065.1
Location
OX463857.1:23973709-24005449[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-22 4.3e-19 69.7 0.0 2 89 17 102 16 102 0.94
2 2 1.3 4.9e+03 -1.0 0.8 26 53 848 878 832 903 0.58

Sequence Information

Coding Sequence
atgactaAATTTCATGTTAAAACTAATTCATCAGCATATCTACGTGATAAAGAAGTGTTTATCAAAGAATTGAAACACTTTCACGAAGTAAGAGGATCTACAATTCGCCACCTGCCCGTCATCAATGGAAAAGAGATTGACTTGTATCTCTTGTATATGATAGTCACACATCACGGAGGATGGATGaaggTCAACAGCCAAGGTCTTTGGGACAGCATGCTCAAACAGCTGGGTCTACCAGCGTCATGTGTCAATGGGGGAGTGGCCATCAGGCAACTGTATTTAAGGCACCTGGAGAGGTGGGAGCGAGCCAGGGGCAGCGGAGGAGGGGGTGGAGGAGGTGGTGGGGGAGATATAGATGGGGGGCTGGATGAAGGGGATGATGACAGACCGAGAAGAGCTGCTTGGGGCACACCCAAACCGAGGAACACTGTCGCTCTGACATATAATCATAACCAACATAATGTGCCAGATCACCTGAGAGAGAGCTTAGGCATGTTTCCGCTTCAGAAATTTGGTGGAAGTATGGAGCGACTAGCTTTATCACTGCTCAGTCCTCTTCCCAATGAGCAGGACTTTGCCCTCAATGTGTGCACCATCCTCGCAGCAGATATGAACAACAAGCTTCCAATTCACTCGACTCCTCATATTATCGACTTCCTACTGGGGCATGCTGCTGTTTATAATCatgTGAGTCTCCGTGACGTGATTGGCAAGTCGTACAAAGATGCCCGCAAAGTGAGTATGGAGTGGTTCTGGGCGGAGCATGCGCGGCCGACCGGAGCATTGGAGCTGCTGGATGAGCGTCGCTTTCCTCTGCACGGACTGGCAATGCGCGCCTTAGTCTCGCAGCTTAGTCTCAACACCTGCCTCGTCACCGGGGAATTACCTGAGGAGGAGGACGAAAAGgaAATCCCAGCATTGGAAGATGTGTCCTCAGCCATGCTAGGCGACGAGGAGGGAGTTCTGGCCAACAAGTGTACCGGCGGCGCCCGAGATCTAGTATCCCGGCGCATCTCCCAAGTGGGTACCATAATGAGGAACCTGTCTTTCCATGAGGATAACCTAACGCTGCTCGCCAAACATCAGACCTTTATCAGATTCATCTTGATGTGCGTGAACTGCGCACAGAGCCACACGCGCCAGATGGGTCTGGATGCACTGGGTAATGTGGCCACTGAGCTGACGGTGCGGGACCCAGCTACGTGTCTTGTGTCGCGTCATCTGCTCGCAACTCTGGCTGCACTTCTGCACTCAGAGGACCGGGCGCGAGTGCTTGCTGCGCTTGAAGTGCTCAATAAACTGGCGCAAAATGAGGCCAATGAGGACGTGCTGCTCAGGTGTTTGGAGCCAAAGgTTTACGAACAGGTCTGCTCGTACCTGACCCTACATGACATAATGCTGCTGGTGGTGACACTAGAGTGCGTGTACGCCCTCACCACGCTTGGAGAGAAGGCTTGCGACTGCATTGTCAAGGTGCATGGGCTGGTGGATACACTGGTTTCACTCATCACAGTTGAgGCTCAGAGCTATGGCCCCAAAGCGTGTATCCTCATGCGAGTGGTGGAGACTGTCCCAGGAAATGTCCCTATGCAGAACCCCCCTAATCCTCCAAGCCCACCTCCAGTTGCAGTCCACATTCAGCATCAGCCTCCGCCACAAATACAACAGCAGCTACCTCCACAATCGACGAATGTTCAACCATTACAGACGTTAACGCAGCAGACTCAACATCCCTTGCCGCCACCGCCGCCACAGCCAGTACAAGTCCAACCTGTGCAAGGGCCGGCCGCGGTGAGGCAACCCAGCCCCCAACCACAAAGTGGCCCCGCTACCGGGGCAGGCCGCCCACCAGGGCCAGCCACTCCGCCCTCCAATCCGCTGCACCTCACAGTGCAGCAACAGCATGCACACCAGCAGGCCATTCAGGAAAATGAACAGTTTGCGCTGGGTTGGCTGCGCAGGACATGGGAACCCTGCTCACCAGGGATCCGGTTGGATTCAGCGGAACTGTACAAGCAGTACATGGCTTGCTGTCAGAAAGTTGGCCGCAAGGGAGTTATCTCTCCGCTGCACTTCCCCAGGCTTGTGAGGTCTGTATTTGGAGGCATGGTCGGACCCAATCCTGTGAAAGCTCCCAATGGTGAGACCCAGCAGTGCTACATGGGAATAAGGCAAAGTCAGGCAGCCATAAATAATAAGCAAGTGACTAACGTCAAAACCGGCCCTGCATCTCCAATTTTGAAGGCCCAACTTAGTAAAgctgaacaaaataaattacagatGGCGACACATCCACACTTGAGCCACGCTTTGAACGATTCCTCAACATCTCTTACCACCAGCTCTCCCCCGCCTTTACTTCAAGTGGTCCAAACAAGTCAACCGAAAGTAGCTCAACCAAATATCCAGATGGCATCAGGCAACATCCAGGTCGCACCGCAACAGAATATCCAAATAGGATCGCAGCAGACTATTCAAATGACAGGACAACCGAACGTCCAGCAAAATGTCCAACAACAGCAACAGAACGTCCAGATTGTCGGACAACAAAGTATTCAGCAGAATCAGCAGATGCCACAGTTGGTCCAACAACAGGGTGGGGCGACAAATACATCGCTTATTAAACACCTGTTAGCGCATAAGgtaACTCAACGTCAAAATCAGCAGAGATTGATGGGGCAAGCTTCCAGTTCGCAGCAGGGGAATCCCACTCAAGCACAAACTGGAATTCCTaTGGAGCTAGATGCTGAGGCCCTAATTTCATGCAGCACAATTACTTCTACTGGAGTGACTAGTACAGCACCAGTACCATTATCGAATATCAAGagTTCATCAGTGCCACCCTTAGCACCTATTTCTAGACCTATCACTCTTAAACAAGAGGAATTAGCAGaggGTGTCATCATCGAAGCTTCAGTACAGGAATCTATAGTTATCGATGATAATCCAGTAAACAATAACAAAATGCTGGCAGATCTGCTGGAGAAGCGCTCTCCGCCTACGCCAGGGTCTGCGAGTGTAGTAGTTGCAACACAGGTACGAGAGGAGGACAGGAGAGGCAGCCGCGAGGAGGATCCTGACGAGCCCAGCATCAAGAAACCTCGCAATgAAGCCGTCTCTTCCAAAGCCGCTAACCTCTATGCTGCTCTTGCTGCAGATGCTTTAGAAGACGAAGAAGACTTGGTAAGGAACTTtcaaataccaaatcaatataAAGACATTCATTATGGATAG
Protein Sequence
MTKFHVKTNSSAYLRDKEVFIKELKHFHEVRGSTIRHLPVINGKEIDLYLLYMIVTHHGGWMKVNSQGLWDSMLKQLGLPASCVNGGVAIRQLYLRHLERWERARGSGGGGGGGGGGDIDGGLDEGDDDRPRRAAWGTPKPRNTVALTYNHNQHNVPDHLRESLGMFPLQKFGGSMERLALSLLSPLPNEQDFALNVCTILAADMNNKLPIHSTPHIIDFLLGHAAVYNHVSLRDVIGKSYKDARKVSMEWFWAEHARPTGALELLDERRFPLHGLAMRALVSQLSLNTCLVTGELPEEEDEKEIPALEDVSSAMLGDEEGVLANKCTGGARDLVSRRISQVGTIMRNLSFHEDNLTLLAKHQTFIRFILMCVNCAQSHTRQMGLDALGNVATELTVRDPATCLVSRHLLATLAALLHSEDRARVLAALEVLNKLAQNEANEDVLLRCLEPKVYEQVCSYLTLHDIMLLVVTLECVYALTTLGEKACDCIVKVHGLVDTLVSLITVEAQSYGPKACILMRVVETVPGNVPMQNPPNPPSPPPVAVHIQHQPPPQIQQQLPPQSTNVQPLQTLTQQTQHPLPPPPPQPVQVQPVQGPAAVRQPSPQPQSGPATGAGRPPGPATPPSNPLHLTVQQQHAHQQAIQENEQFALGWLRRTWEPCSPGIRLDSAELYKQYMACCQKVGRKGVISPLHFPRLVRSVFGGMVGPNPVKAPNGETQQCYMGIRQSQAAINNKQVTNVKTGPASPILKAQLSKAEQNKLQMATHPHLSHALNDSSTSLTTSSPPPLLQVVQTSQPKVAQPNIQMASGNIQVAPQQNIQIGSQQTIQMTGQPNVQQNVQQQQQNVQIVGQQSIQQNQQMPQLVQQQGGATNTSLIKHLLAHKVTQRQNQQRLMGQASSSQQGNPTQAQTGIPMELDAEALISCSTITSTGVTSTAPVPLSNIKSSSVPPLAPISRPITLKQEELAEGVIIEASVQESIVIDDNPVNNNKMLADLLEKRSPPTPGSASVVVATQVREEDRRGSREEDPDEPSIKKPRNEAVSSKAANLYAALAADALEDEEDLVRNFQIPNQYKDIHYG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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