Ople009703.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- GATA-B
- Assembly
- GCA_905475445.1
- Location
- FR997725.1:177370-179573[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-18 2e-14 54.2 3.9 1 34 11 43 11 45 0.97 2 2 7.9e-18 4.4e-14 53.1 7.2 1 34 78 110 78 112 0.97
Sequence Information
- Coding Sequence
- ATGGCGGAGTTTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCCTCGCCGCGCCCCACGCGCCCCCGCACGACATGGGCACGAAGCGGCCGGGCATGGCGTGCACCAACTGCCAGACCACGACGACGTCGCTGTGGCGCCGCAACTCGCTGGGCGAGACCGTGTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACATCAACCGACCGCTGGCCATGAAGAAGGACTCCATACAGACAAGAAAgaggaaaccaaaaaatagtataaaagcgGAGCGAAGCATCAAAGCAGCCGTGCAGCGTACGGTGACGTCGGGCGTCAAGATCGAGAACCTGCTGGAGGGAGGCCCGGGCGGCGGCGGGGGCGCGCGCTCCCCACTCGCGCTCAACTACTACGTGCAGCACGCGCTCAAGCTGGAGGAGCCACCGCCGGCGCACGCGCAGACCGCGCCGCACCTCGCGCACTCGCACGCGCACGCGTCGCACGGCGCGCACGCGTcgcacgcgcacgccgcgcacgcGCTCTACGACGACGAGTACCGGCGCGCGGCCGACGAGCGGCTGGAGCGGCCCACCGTCGTGTCCATGGGCAGCTGA
- Protein Sequence
- MAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRLAAPHAPPHDMGTKRPGMACTNCQTTTTSLWRRNSLGETVCNACGLYYKLHNINRPLAMKKDSIQTRKRKPKNSIKAERSIKAAVQRTVTSGVKIENLLEGGPGGGGGARSPLALNYYVQHALKLEEPPPAHAQTAPHLAHSHAHASHGAHASHAHAAHALYDDEYRRAADERLERPTVVSMGS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01062411;
- 90% Identity
- iTF_00449782; iTF_01084795; iTF_00685995; iTF_00043144; iTF_01062411; iTF_01063407; iTF_01533601; iTF_00712517; iTF_00929234; iTF_01065215; iTF_00042293; iTF_00177741; iTF_01532687; iTF_01118896; iTF_00302709; iTF_01117916; iTF_00041440;
- 80% Identity
- -