Basic Information

Insect: Ochropleura plecta
Gene Symbol: -
Assembly: GCA_905475445.1
Location: FR997736.1:13966439-13977287[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0061 0.73 11.7 1.3 2 23 751 773 750 773 0.95

2 7 0.00023 0.028 16.1 3.4 3 21 793 811 792 812 0.96

3 7 4.8e-05 0.0058 18.3 1.8 1 23 823 845 823 845 0.98

4 7 1.6e-05 0.0019 19.8 0.1 2 23 858 879 857 879 0.97

5 7 1.3e-06 0.00015 23.2 0.5 2 23 886 907 885 907 0.97

6 7 0.00018 0.021 16.5 0.4 1 23 913 935 913 935 0.98

7 7 0.0017 0.2 13.4 0.8 1 21 941 961 941 962 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0061	0.73	11.7	1.3	2	23	751	773	750	773	0.95
2	7	0.00023	0.028	16.1	3.4	3	21	793	811	792	812	0.96
3	7	4.8e-05	0.0058	18.3	1.8	1	23	823	845	823	845	0.98
4	7	1.6e-05	0.0019	19.8	0.1	2	23	858	879	857	879	0.97
5	7	1.3e-06	0.00015	23.2	0.5	2	23	886	907	885	907	0.97
6	7	0.00018	0.021	16.5	0.4	1	23	913	935	913	935	0.98
7	7	0.0017	0.2	13.4	0.8	1	21	941	961	941	962	0.96

Sequence Information

Coding Sequence: ATGGAAGGGTTTTGCAGAGGTTGTCTCATAAAATATAATGAACCGATGGAGTTGCTTCAATatactgagaaaaacagaaggCTATTTGTATATTCCACCGGTTTACAGGTGAAGAGAAATGACAGCTTCACATTCCAGTTATGTAAAGACTGCTTTCTAAACATGAAGCAAGCCTGCAAGTTTAAAAAGAATTGTCGTACATCAGACAAACGATTCAGAAATTACTTAGCTTTAAAAGATATAGGGGATCCAATGGATTTCTGCACATTCCTGAAGAACAGTGATGATACTTTAACATTCCgTCTTCCAATGGCAAGTGGGAGTAGTACACCAGCGACTCAAAAATGTAGAGATGATGACAATGAATCAACATGCACAAGTATCCGTAACTTTATGACGGATATTCTCCAAGGCGAAGAGATGCCTGATACAGAAGCAAGGATCATTAAAGAGGTTATTGAAGAAGAGGCTGATCTACTAGATGACTCTCTTGATTCCCATTGGCTGCAGGATGATATGTCTATTGATACAGACTTCAGATTGGATTTAAGTTTCAGCCCATTCTCAACACCACGTTCCGGTAATAATGATCACTATTATACCCCTAAACAAAAAGATGATCAAGTTACCTTCAACACAATAAACActgagaaacaaacaaaaatcctCAAAGACTTCACAAATGCTTTTAAATCTGACGAAAATATTAAAGAACTTAGTATTTTTGTTGGAACCGTAGAGAAAACGGGAAGCAACAATTTAAAAGAATTAAGTCCATTTGGTATAGACGAAATAGATGGTATTGAAAAACCAGAAGCTGATAGTCTAAACAATAAACCTAATCTAAAAGAATTTATAAGTAATCTTGAGATGAATGAAATAGATGGCATGGACACATCATACAGTAAAACTGGCAATAGTGATGAAAACCTGAAATTATGTGATTTTGGTATAGAAATTggtaatattcataaaaaagatATCAACAACCTTGAGAGTAGTCAAAATGTAAAAGAATTGTGCAATTTTGGCCTGGATGAAATTGATAGTATGGTAAATGTAAAAAGTAAAACTCTaaaagaattaataaataacatggACACTGACAACATTGTTGCCACATGCAACATTGATGCTTTTGGAAAAACTGATCTTCAAGGTGATAAACATCTAAAAGAAATCTGTGATTTTAGTTTAGATAGTTTTATAGGAGTAGAGAAAGCAGAAAGCAAAACGCAGAAAGCTGTCCAAAGCCTAAAAGAACTATGTGATTTTAGTTTAGATAGTATAGGAAGTATTGATAAACCAGCAGGCATTACCAACAAAAGTAACCAAAGTCTGAAAGAATTATTAGATTTGAGTTTAAATAGTTTTGATGATTCAGCGAAATCTGGgagaaataatttcaaaaacgcTCAAACCGAAAAAGATCTTGATTTAagtttaaatgattttgaagACATAGAGAACCCAGGAAgtaatacttacaaaacaggTAGAAACATACAGGAAATATGTGATTTTGGTGCTACTGAAATCAATGAAGGTGACAAATCAGAAAGCAATTTAGATTTACCATCATTGTCTGACGTTTTTGAAAGAGACAAGATGGACACACCAGACTTTGATTTACCAAAGGGTGTAAAATCCGTTCAGTCTCAAAATGATATCAGTAATAGTATTATCAACATAGAGTCCTTGTTAAACGATAAACCATGCACAATtgacaaaaatttaaaagatgCTTTGAAGAATACTGATAGTCAAGAATTTTCTTTAGAAGATTTAGTTGCTTCACCAAcagtaTTCCGTGCCACATCAGCAGCGTCTACACCTACAATAACTAACATATTATTTGGTGAAAAGCTTGATACACCTGATACTAAAAGTAGAATAGAACAGGGCATCGATCCATATCAAGATGTAGAAATATTTGAAGAATTCTTCCAAAACGACACAAAAGAATTTGACATAGAAGACATTAAAAGAGTAAATGGGGGATTTGCATCAGAAGAATGGAAAAAACCTATTGCTGTAAATTGTGCTGAAATTGATAATGAAGAAAATATGTCAGAAAATATCGGCAGGGATGTATCTATTGACATTAAGGACCAAACTGATGATAATTATGATACAGCTTTATCAGAACCAAAGAATGAAATTAAAGAATACATTCCAGATACAGCCCCTAATGACAAATTTGACATAGGAACAGATACATGGCATGATAAATTTGATATTGAAAAATCATACTgtaaattgtgtaaaaaaaagttcaaaaatGGAAGAGCACTAAGCATACATTATGCCACAACTCATAATATCAAAATCGTAAAACCGGCTTACGATAGAAAAAGAAACCAGAAGAACCTTTTATGTAATAATTGTGGTAAGACATGCAAGTATTCTTCAGATCTTCATAAGCATATGAAAATTTGTAAGTTAAAAGGAATGATGAAGGaaaattttaaatgcgaatattgTCTGCAAGAATTCACGACGCAATATAATTTAGATAAACACATCACCAGTCATACGAATATGAAGAGAAAAATTACCGGAAAGGAAGTTGTATGTACAATTTGCGGCGCCATTTTGCGTCGAAAAAGTAACCTAGTATTGCACATGAGAAAGCATAATAAAGACTACAGCGTGAAGTGCGAGTACTGCGACAAAGGATTCTATAGACAATCAGATTTGAACATTCACGTGAGGAACCACACTGGTGAAACACCATTTTCGTGTACATTTTGCCCGAGGTTGTTCGCCCGTCGAGATGTTTTATTACGACATATCCGTATTCATCTTAATGAAAGATTATTCGAATGCGACTACTGTGGTTTGAAGTGTATGAAAAAATACGATTTAATTATACACATACGAAATAAATCCTGtagaaatgaattaaaaaagaaagttaagacaaaaaagaaatcggtcaagaaagaaaatatggacATCGATGTTCCagaggaaaaaaataatatagaagtTAGAAAAGAAGAAGTAGAAATCAGAAAAGAAGAAGTAGAAGTCAGAAAAGAAGAAGTAGAAGTCAGAATAGAAGAAGTAGAAGTTAGAAACGACGAAGTAGAAGTTAGAAACAACGAAGTAGAAGTTAGAAACGGCGAAATAGAAGTTTTTAATGTAGGAGTcagaaaaaaagttaaagttatttatgCTAGAGGCAGTAATGCTACGCTCAAACGCCAGTTACCTTTCTTGGAAACTGAAAGaagtaattaa
Protein Sequence: MEGFCRGCLIKYNEPMELLQYTEKNRRLFVYSTGLQVKRNDSFTFQLCKDCFLNMKQACKFKKNCRTSDKRFRNYLALKDIGDPMDFCTFLKNSDDTLTFRLPMASGSSTPATQKCRDDDNESTCTSIRNFMTDILQGEEMPDTEARIIKEVIEEEADLLDDSLDSHWLQDDMSIDTDFRLDLSFSPFSTPRSGNNDHYYTPKQKDDQVTFNTINTEKQTKILKDFTNAFKSDENIKELSIFVGTVEKTGSNNLKELSPFGIDEIDGIEKPEADSLNNKPNLKEFISNLEMNEIDGMDTSYSKTGNSDENLKLCDFGIEIGNIHKKDINNLESSQNVKELCNFGLDEIDSMVNVKSKTLKELINNMDTDNIVATCNIDAFGKTDLQGDKHLKEICDFSLDSFIGVEKAESKTQKAVQSLKELCDFSLDSIGSIDKPAGITNKSNQSLKELLDLSLNSFDDSAKSGRNNFKNAQTEKDLDLSLNDFEDIENPGSNTYKTGRNIQEICDFGATEINEGDKSESNLDLPSLSDVFERDKMDTPDFDLPKGVKSVQSQNDISNSIINIESLLNDKPCTIDKNLKDALKNTDSQEFSLEDLVASPTVFRATSAASTPTITNILFGEKLDTPDTKSRIEQGIDPYQDVEIFEEFFQNDTKEFDIEDIKRVNGGFASEEWKKPIAVNCAEIDNEENMSENIGRDVSIDIKDQTDDNYDTALSEPKNEIKEYIPDTAPNDKFDIGTDTWHDKFDIEKSYCKLCKKKFKNGRALSIHYATTHNIKIVKPAYDRKRNQKNLLCNNCGKTCKYSSDLHKHMKICKLKGMMKENFKCEYCLQEFTTQYNLDKHITSHTNMKRKITGKEVVCTICGAILRRKSNLVLHMRKHNKDYSVKCEYCDKGFYRQSDLNIHVRNHTGETPFSCTFCPRLFARRDVLLRHIRIHLNERLFECDYCGLKCMKKYDLIIHIRNKSCRNELKKKVKTKKKSVKKENMDIDVPEEKNNIEVRKEEVEIRKEEVEVRKEEVEVRIEEVEVRNDEVEVRNNEVEVRNGEIEVFNVGVRKKVKVIYARGSNATLKRQLPFLETERSN*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01084632;
90% Identity: -
80% Identity: -