Ople038992.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- X-element\ORF2
- Assembly
- GCA_905475445.1
- Location
- FR997751.1:6174719-6199732[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.42 50 5.9 0.4 1 23 999 1022 999 1022 0.91 2 9 0.01 1.2 11.0 0.4 1 23 1029 1051 1029 1051 0.98 3 9 3.9e-05 0.0046 18.6 0.8 2 23 1071 1093 1070 1093 0.93 4 9 6.2e-05 0.0074 17.9 1.0 1 23 1099 1121 1099 1121 0.97 5 9 0.012 1.4 10.7 1.1 3 21 1134 1152 1133 1157 0.93 6 9 7.8e-05 0.0094 17.6 2.0 1 23 1165 1188 1165 1188 0.94 7 9 0.0047 0.57 12.0 0.2 1 23 1193 1216 1193 1216 0.97 8 9 4.1e-06 0.00049 21.6 3.1 2 23 1223 1244 1222 1244 0.97 9 9 5.6e-06 0.00067 21.2 1.3 1 23 1250 1273 1250 1273 0.95
Sequence Information
- Coding Sequence
- ATGTTAATCTCGGAAACGCATTTTACAAGTAAAAGCTATTTTAACATACCAGgatacaaattctatcacaccaCGCACCCTGACGGAAAAGGCCACGGAGGAAGTGCAGTTCTGATTAAGAACAACATAAGACATCACTTAGCTCACAACTATTGTTCTGAAAAAATTCAGGCTACAAACATTGTGATAGAGGACTGGTTGGGACATGTCACAGTATCAGCTATATATAGCCCTCCCAAGCATGTCATAAAGCAAGAGGAATACGAAAAATACCTTAAAACCTTGGGACAGCGGTTTGTGTCTGGCGGTGACTTTAATGCCAAGCACACATTCTGGGGTTCTCGGACTATAAATTCAAAAGGCCGACAGCTAATCCTAGCGATAAATAAACTCCAACTGGGCGTTATCTCAACAGGAAAACCAACATACTGGCCCACTGATCGAAATAGGAAGCCAGATCTCATTGACTTTTGCGTCATCAAAGGTATTAGCAACACCGACTTCAGTTGCAACTCTAGTACTGACCTGTCCTCTGACCATTCTCCTGTGGAAGTATTATTGAGTCGAAGAATTCTGCAAAAAGAAAGACCTTGCCGACTACATACCCGTAGAACTAACTGGGAATACTTTCGCGAGTTAATAACTAAATCTCTTGATGTCAAAATGCCATTACAAAAGGATGACGATATTATAAGCGCAGTTGAACATTTTAACAACATAGTCCAACAAGCTGCATGGGAAGCCACGCCTCCACCAAAGCCCATAAATCGAGATGGATTCCAAAGCTCACCATCTATCAGAAAGCTACTAGATGAAAAGCGTAAAGCTAGAAAGAGATGGCAAACCACTCGGTACCCAGGGGACAAAACAACATTCAATAGACTAGCCGCACAACTCAAGCAACTATTGAGCGATGATAGAAACCAGAATATCGCAACATACCTGCAAAATCTGGACGCCAAACCTTCTACTGACTACTCATTGTGGAAAGCGACAAAAGGCCTCAAACGCCCAATAACTTACCAACCACCTCTGCTCAAAGCAGATAACTCATGGGCTAGGAATGATGTGGAGAAAGCCAATGTATTCATGGAACATCTGCAAGAAGTCTTCCAACCAAACCCCAACATTGGCTCTACAAAGGCGGAAATGGTTGTAGAACTGCTGAACCAGACGCACCAACTAGAGTTGCCCATTCAGAAACTTAGCAAAGCAGAAATCAAATCTGCAATTAGAAAACTGAATGTAGGAAAAGCCCCTGGATACGATCTAATTACATCAACCATTCTAAAAGAGCTACCAGAGCAGGGCATAACATTCTTGACGCAATTATATAATGCTATCCTTCGAAAAGAATATGTACCTCCACAATGGAAAGTAGCTAAAATCATTATGATCCCGAAACCAGGCAAAAGTCCAGAAGATGCCAAATCCTATCGGCCAATTAGCCTACTCCCAATTGCGTCCAAAGTAATGGAGACATTGATCCTCGTAAGGTTAAATCCAATTATCAAGGAAAACAACCTAATACCCGATCACCAGTTTGGATTCAGGGAAAAGCACGGTACAATCGAGCAAATTCATAGACTCGTCAATGGTATAGCAAAATCATTTGAACAGAAAGAATACTGCACAGCTTCCTTCCTTGACATATCACAAGCTTTTGACAGAGTCTGGCACGATGGACTTctgtacaaaattaaaaagacacTGCCTATCAACTTTTATAGTCTAATAAGATCTTACCTACTTGGCAGACACTTCTTCGTCAGTCACGGTGAAGCAAATACAGAACTTAAAGAAATTCAAGCTGGAGTGCCGCAGGGTAGTGTAATGGGACCTACTCTGTATCTTCTTTATACCGCGGACTTGCCGATATCTGACGATGTTGTTATGGGCACTTTTGCCGATGACACAGCTATCATGGCATCAGATGACTCACCAATTCAAGCTTCTCTCAAACTACAGAACAGCCTGGATAAGATCACAACATGGCTAAAAGACTGGCGCATCAAAGCTAATGAAACAAAATCACTTCAGGTAACATTTACAACCCGACGACAGACTTGTCCCCCAGTTACCCTGAATGCCGTCCAGCTTCCACAATCTGACGAAGCAAAATATCTCGGAATGTATCTAGACCGACGCCTAACATGGAGAAAGCACATTTTTACTAAACGCCTAGCAATGGGACAACAAGTGCGTAAGATGTATTGGTTGATGAATAGAAATAGCCAGCTctcaatggaaaataaacttttgttaTATAAGAGTATAATAAAGCCAATATGGACATACGGAATACAGCTATGGGGCACAGCTGCCAACTCCAACCTAGAAATTCTACAAAGGTTTCAATCAAAAATGCTAAGGCTGATAGTAGACGCACCATGCTTGTCTGCAGTAAATCTGCAGGTCTGTTGGGAGTGCAAAGCTTTGTTAGAGAAGAGTATATCCTTCAGAGAACAAGTCCAGGACTCGTACAGGATACTACAGACATATACTCAAGAGAATCTCCATGAATGTCTCCTAACAGACGTCAGTCGTCCCCCTCGGTTGAAGGTCCACTGTGTGGAACCCACCAGCATTTCTCCTTCAGAAGGGTATGAAGCATCTCCAATATACGCAGAGGTACCTATCATTTGCGTTAAAGATGAGCTCAAAGAGGACTGGGAAAGTGATCACGATGACACAAATATCTTAGAAGAAACCAGCCCTCTTTCAGATAGTTCAGAAAACACGAATAATTTCGAATCTGAACTACAGAATATATTGGGCTCTATGAAAAGGGATGAAAAGAGGAAGAGAGACGGCAAGACTAAAGTAAAGAGGGACAAGAAGATTAAAAGGGTTAAAGTGGATGCTAAAGTTGCAGTCAAGCCAAAACCTTCAAAAGATCAAAACCAGAAGATCTTAACCATAGAGCTGACGTACGAGGAGATGTTGttagaaagagagagagaatcTACCAGAGAGGCGTATACTAAGGCTGAGTACAAATGTGAGAGCTGTCTCATCGGATTCAACTACAGCAAATCTTATACTGACCATGTAGCGGCCAGGCATTCGACGAATCTAGGGGACTACATTTGTCCTATTTGCAAAACTATAATTTCTTCGGTGGATTCGTTTACATCCCATTACAAGAGGCATATGAGAAGCTCCATAGACACACATCGGTACCATAAAGACACACACAAAGCTAGAGTACAGTGCACAGAGTGCGACAAAACATTCAGACACAGAGCGGGACTCATGAACCATAGACTGGCAGTCCATGAATACCGCAACTCGTTTCCCTGCACCGTCTGCGATAAAGTGTTCAGGTGGAAAACTAGCCTTAAACGACATTTAGAGAAACATGAAATTAAGGTTAAGTCCTCATCAGCTGAAGCCTACTGCGCGATGTGCAACGTGAGCTTCTCGTCAATATTCTCCTTCCAGCGGCATATGAAGAATAGTCTCAAACATGTCACACACGATCAGCTCAAattCATCTGCGACCATTGTAACAAACGATTTGCTGACAAGACAAAGTTAAGAGATCATATTGAAGAGAAACATCTGCACAGGACTTACCAATGTCAAATATGTCTTAAGccTTCTAAAAACCGCGTTGGCTTGGATCAACATATACGTAACGTTCACAAGAGGCAGAACAACAAGATGTGCCATCATTGCGGCAAAGGATTTCCTaCCAAAGTTCAATTGGAGTCCCACATTCGAAGCCACACTGGAGAGCGACCATTCATATGTGAATACTGCCCCACGACCTTCTCACAGCAGTCCAACTTATACAAACATAATCGACAGGTACATCTGAATATAAAATCGAAACGCCATTCAATGTataagaaaaaagaagaaaaactcCCTGATGTGCCCATGTTGGAGCAAGTCCAGCCGATTGAGCAGTACAGACCAGTGAACATGTTACATTACGCCGCGGAAAAGGTCTTCAGTATGTGA
- Protein Sequence
- MLISETHFTSKSYFNIPGYKFYHTTHPDGKGHGGSAVLIKNNIRHHLAHNYCSEKIQATNIVIEDWLGHVTVSAIYSPPKHVIKQEEYEKYLKTLGQRFVSGGDFNAKHTFWGSRTINSKGRQLILAINKLQLGVISTGKPTYWPTDRNRKPDLIDFCVIKGISNTDFSCNSSTDLSSDHSPVEVLLSRRILQKERPCRLHTRRTNWEYFRELITKSLDVKMPLQKDDDIISAVEHFNNIVQQAAWEATPPPKPINRDGFQSSPSIRKLLDEKRKARKRWQTTRYPGDKTTFNRLAAQLKQLLSDDRNQNIATYLQNLDAKPSTDYSLWKATKGLKRPITYQPPLLKADNSWARNDVEKANVFMEHLQEVFQPNPNIGSTKAEMVVELLNQTHQLELPIQKLSKAEIKSAIRKLNVGKAPGYDLITSTILKELPEQGITFLTQLYNAILRKEYVPPQWKVAKIIMIPKPGKSPEDAKSYRPISLLPIASKVMETLILVRLNPIIKENNLIPDHQFGFREKHGTIEQIHRLVNGIAKSFEQKEYCTASFLDISQAFDRVWHDGLLYKIKKTLPINFYSLIRSYLLGRHFFVSHGEANTELKEIQAGVPQGSVMGPTLYLLYTADLPISDDVVMGTFADDTAIMASDDSPIQASLKLQNSLDKITTWLKDWRIKANETKSLQVTFTTRRQTCPPVTLNAVQLPQSDEAKYLGMYLDRRLTWRKHIFTKRLAMGQQVRKMYWLMNRNSQLSMENKLLLYKSIIKPIWTYGIQLWGTAANSNLEILQRFQSKMLRLIVDAPCLSAVNLQVCWECKALLEKSISFREQVQDSYRILQTYTQENLHECLLTDVSRPPRLKVHCVEPTSISPSEGYEASPIYAEVPIICVKDELKEDWESDHDDTNILEETSPLSDSSENTNNFESELQNILGSMKRDEKRKRDGKTKVKRDKKIKRVKVDAKVAVKPKPSKDQNQKILTIELTYEEMLLERERESTREAYTKAEYKCESCLIGFNYSKSYTDHVAARHSTNLGDYICPICKTIISSVDSFTSHYKRHMRSSIDTHRYHKDTHKARVQCTECDKTFRHRAGLMNHRLAVHEYRNSFPCTVCDKVFRWKTSLKRHLEKHEIKVKSSSAEAYCAMCNVSFSSIFSFQRHMKNSLKHVTHDQLKFICDHCNKRFADKTKLRDHIEEKHLHRTYQCQICLKPSKNRVGLDQHIRNVHKRQNNKMCHHCGKGFPTKVQLESHIRSHTGERPFICEYCPTTFSQQSNLYKHNRQVHLNIKSKRHSMYKKKEEKLPDVPMLEQVQPIEQYRPVNMLHYAAEKVFSM*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -