Basic Information

Insect: Ochropleura plecta
Gene Symbol: -
Assembly: GCA_905475445.1
Location: FR997736.1:15701244-15706475[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0066 0.79 11.5 1.9 2 23 203 224 202 224 0.98

2 10 0.0011 0.13 14.0 4.1 2 20 232 250 231 253 0.93

3 10 7.7e-06 0.00092 20.8 0.7 1 23 259 281 259 281 0.98

4 10 0.0001 0.012 17.3 7.7 1 23 287 309 287 309 0.97

5 10 1.5e-07 1.8e-05 26.1 1.3 1 23 315 337 315 337 0.96

6 10 9.5e-05 0.011 17.3 0.3 1 23 343 365 343 365 0.95

7 10 7.6e-05 0.009 17.7 2.8 1 23 371 394 371 395 0.95

8 10 0.016 1.9 10.3 2.4 1 23 400 422 400 422 0.95

9 10 2.7e-07 3.2e-05 25.4 0.5 1 23 428 450 428 450 0.99

10 10 5.8e-05 0.007 18.0 1.5 1 23 456 478 456 478 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0066	0.79	11.5	1.9	2	23	203	224	202	224	0.98
2	10	0.0011	0.13	14.0	4.1	2	20	232	250	231	253	0.93
3	10	7.7e-06	0.00092	20.8	0.7	1	23	259	281	259	281	0.98
4	10	0.0001	0.012	17.3	7.7	1	23	287	309	287	309	0.97
5	10	1.5e-07	1.8e-05	26.1	1.3	1	23	315	337	315	337	0.96
6	10	9.5e-05	0.011	17.3	0.3	1	23	343	365	343	365	0.95
7	10	7.6e-05	0.009	17.7	2.8	1	23	371	394	371	395	0.95
8	10	0.016	1.9	10.3	2.4	1	23	400	422	400	422	0.95
9	10	2.7e-07	3.2e-05	25.4	0.5	1	23	428	450	428	450	0.99
10	10	5.8e-05	0.007	18.0	1.5	1	23	456	478	456	478	0.97

Sequence Information

Coding Sequence: atGAATTTGAATTCTAAAAACTTAGATTTGTGTTGCCGTACTTGTTTGCGAGATGATTCCGAAGATTTGTTTGAAATATTTCCAGAAGAATCAACTAATTTGGTAGATGCTGCTGAATTAATAACATCATGTATTTCAATACGGGTGTCTATGGAGGATAAGTTACCTAAGAAGATATGCAGCAATTGCTATAGttgtttattaaagttttatgaATTGAAACGCACTGCACTCAATGCTGATGTTGCATTGAGAGTACATTTTTCTAAAGTAATCAGTGATGGTATAAAAGATGTTGGAACCATAAAGCAGAATAACAACATAATAGAAATTAAACTTGAAGTTGACAATCACTATCAAATTGAAAATAACTTAGACGACAGTGTTGATTCTGATGGCAATTATAGTATGGCAATTAAAGAAGAAATCTATCCACGTAATGTATCAATAATGTACTCAGATATATCTGATGCAAGTCAACTAGAGGAACAACAAGCAAATCGTAAGAAAACTGAACTAAACATGGACCATTTTGTAACATACAGATCAGGTTCCAAAAGTAAACCTTATATTGTCGAAATTAACCACAAAAGAGAACAAAGAAAACAATGTGATGTTTGTTTTAATACTTTCAAATCCATCAACTCTTTATCAGCTCATAAAAGAAAACATGCATCAAAAGACAGGGTTCTTTCATGTTCAATTTGCAGTAAGGTATTCAAAAAAATATCCCATTTAAAAAGACATGAACTTTGTCATGAAAACAATCGCCCCTTCAAATGCTCTAAATGCCCAAAGTCTTTCGCTTCAGAAGCTACTTTAACAGAGCATGAGAATAAGCATAATGGAATCAAACCTCATTGCTGTCCAATATGTTCAAAATGTTTTGCTCATCTTTCAACACTCACCAGTCATATAAAGATTCATACGAGAGATAAGCCTTATTTATGTCCTACTTGCGGAAAGAGGTTTGATTCAAGCACTAACTTGAATCAGCATATGAAGAGGCATTTAGGACTGAAGTTATTTGCCTGCAAATTGTGTCCTAGGAAGTTTGTAAGTAAAGgGGAATTAAAATCTCATGGAGTGACTCACACTGGTGAAAAGTCATATGCATGCAATGAATGTGGCGCAACATTCACAAAGCGCAGTTCTATGACCAAACACAAGCTATCTAGGCATCATGGCATTAAACCTTACCTGTGTGACGCTTGTCCTAAGAGgTTTTTAAGCAAAGACCACATGAAGCGTCACAATAGAATACATACGGGTGAAAGACCGTATCGATGTGAACTATGTGATCGTGCATTTACGCAAAGCGCTGATTTGATCAAGCATACACGCTCCCATTTAGGAATTAATCTGTATAAATGCGACCAATGCAGCCAAAGCTTTAGACTTAAGACAGAACTGCGTCAACATATATCAGAACACTTCATATCTTCACAACTGGAAGCATTGAAGATGACTAGTTCAGACACAGCTCAACCATTGATTGATAGAAATGGTGTCATAGGGGAGGTGCCTCAGAAAAGTGCAGTGTTTCAAGGCAAAAGTGATAACTTGGAGCAGTAA
Protein Sequence: MNLNSKNLDLCCRTCLRDDSEDLFEIFPEESTNLVDAAELITSCISIRVSMEDKLPKKICSNCYSCLLKFYELKRTALNADVALRVHFSKVISDGIKDVGTIKQNNNIIEIKLEVDNHYQIENNLDDSVDSDGNYSMAIKEEIYPRNVSIMYSDISDASQLEEQQANRKKTELNMDHFVTYRSGSKSKPYIVEINHKREQRKQCDVCFNTFKSINSLSAHKRKHASKDRVLSCSICSKVFKKISHLKRHELCHENNRPFKCSKCPKSFASEATLTEHENKHNGIKPHCCPICSKCFAHLSTLTSHIKIHTRDKPYLCPTCGKRFDSSTNLNQHMKRHLGLKLFACKLCPRKFVSKGELKSHGVTHTGEKSYACNECGATFTKRSSMTKHKLSRHHGIKPYLCDACPKRFLSKDHMKRHNRIHTGERPYRCELCDRAFTQSADLIKHTRSHLGINLYKCDQCSQSFRLKTELRQHISEHFISSQLEALKMTSSDTAQPLIDRNGVIGEVPQKSAVFQGKSDNLEQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01084490;
90% Identity: iTF_01084490;
80% Identity: -