Basic Information

Insect: Ochropleura plecta
Gene Symbol: -
Assembly: GCA_905475445.1
Location: FR997738.1:6732480-6738237[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.035 4.2 9.3 0.1 5 23 350 368 349 368 0.96

2 12 0.014 1.6 10.6 0.2 3 23 376 396 374 396 0.94

3 12 1.1 1.4e+02 4.5 0.3 2 23 404 425 403 425 0.91

4 12 5.5e-07 6.6e-05 24.4 1.0 2 23 431 452 431 452 0.98

5 12 0.0031 0.37 12.6 4.3 1 23 458 480 458 480 0.98

6 12 0.00069 0.083 14.6 0.3 1 20 484 503 484 505 0.93

7 12 6.9e-05 0.0082 17.8 0.2 1 23 538 561 538 561 0.96

8 12 0.0012 0.15 13.8 0.1 3 23 570 590 569 590 0.99

9 12 9.4e-05 0.011 17.4 0.5 1 23 601 623 601 623 0.98

10 12 8.1e-05 0.0097 17.6 4.5 1 23 629 651 629 651 0.98

11 12 0.003 0.36 12.6 0.3 3 23 659 679 657 679 0.98

12 12 6.5e-06 0.00078 21.0 0.7 1 23 685 708 685 708 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.035	4.2	9.3	0.1	5	23	350	368	349	368	0.96
2	12	0.014	1.6	10.6	0.2	3	23	376	396	374	396	0.94
3	12	1.1	1.4e+02	4.5	0.3	2	23	404	425	403	425	0.91
4	12	5.5e-07	6.6e-05	24.4	1.0	2	23	431	452	431	452	0.98
5	12	0.0031	0.37	12.6	4.3	1	23	458	480	458	480	0.98
6	12	0.00069	0.083	14.6	0.3	1	20	484	503	484	505	0.93
7	12	6.9e-05	0.0082	17.8	0.2	1	23	538	561	538	561	0.96
8	12	0.0012	0.15	13.8	0.1	3	23	570	590	569	590	0.99
9	12	9.4e-05	0.011	17.4	0.5	1	23	601	623	601	623	0.98
10	12	8.1e-05	0.0097	17.6	4.5	1	23	629	651	629	651	0.98
11	12	0.003	0.36	12.6	0.3	3	23	659	679	657	679	0.98
12	12	6.5e-06	0.00078	21.0	0.7	1	23	685	708	685	708	0.96

Sequence Information

Coding Sequence: ATGGAGACGTGGTCCGATTTCTGCCGCTGTTGTTTGTCTGCCAATTCCGAAGTGTCACTCCTAGATTCGGCGCAGAATGTAACTGAGAAATTTCTTGAAATAACTACAATCGAGGTCAAGGAAGACGATGGTCTACCACAGAAGTTGTGCACAGATTGTTATGCTATCATGAACTCCGCATACCAGTTCCGTAAACAGTGCATCAAAATGGACAATGAACTACGTCTACAGCTTAATGCTGTATTAGACATATCTAAAAGTGAAAATCTCTCTAAGtatgatgatggtgatgatgacGATATTGGGAATGATCCCATGAAGCAACTTGAAGCTATCATTAAACAAGAGCCTAATGACAgtgatgatgattattattatgtcTTGGTTATTGATGACCCCAAAGATAAAGGTAAGGAAGAGCaacctataacaacaaatattaaacaagAAGAATATGAAGAAGATATTGCAACAACTGAGGCTGAAACTACAACTACTTTCATTGAACAACCAACTCAAAGCTCACAGAGTCAGTTTGAAGACTCAATTGAATCCTTCCTCATGTCCAATACCAAAGTCTCAGCTAATGTACCAGCCACTATCCTagaaaatgaggaagaaagccAGGAAAATGAGGATCTAGACGGAGCCATGAACATAGATGAAACACAGGGCAGCATGAGTCAAGATCAAATCTATGAAGAAATGGATGTACAAGATAATGAAAACATTGAAAGTATTACTTCCAATGTTATCAAAGAGCTGCCTAATTCCAAAAACTTTATCAAAATACTGACCACAACAGATTCTGATGGCACTATTCTGTTGAAGGGTAATGAAAGGATCCAATACTTGACTGATTCTCAGTTAGTCACAAATGAAGATGAAGACGGAGATGGATTGTCCCAAGAAGTGATATTTTGTGAAGGTGATGACTCTTCTCAGTTCCAAATTCTAAAATACGATGGCTCTGAGTTAGTTATTGAGTATGCTGATGATAGCCAAATAGCTACGGTACTACAACAAGAAGACGGAACATTCTTATGTGATTGTGGAGAGCAGTTTGAAGACTTGGGCGACTATGAGAAGCATCAGTACAAGCACAATCCAGCTGGAGAACATTTGTGTAACTTGTGTGGTAAAGGATTTGAGTCTGCAGAGATTCTGACTGGACACATGTTACTTCATAGCAGTACTGGGCTCTTAATCACTTGTCCATTCTGCAACCAGCTTATAAGACGTAACGCTTTGACACAGCATATCAAGTATGGTCACAACAACATCAAACCTCGCTGCAACGTTTGTTTCAAAACATTTGCCAATCCCAACAACTTAAAACGTCACATGATGATTCACAGCGGAGTCAGAGAATTCGAATGTGACATCTGTTTCAAGAGATTCCACCAAAAAATCACAATGCAAACACATAGGTTAACACACATGCACCCATTTTCATGTAACCAATGTGACCAATCATTTGAGACTAAGACTGCCTTGGCCGATCACAAAGAATCTGAAGACTGTTCTAAGTCTAAAGTGATTAAGGTCAAAGAAGAATTGATGAAGACTGTCAAGCAAGAAATAACTACAAATCTAGGTAAATTGCTTGGTTATGCCTGTTCACTGTGCAAAAAGATGTTTTCAGTGGAGTCAGCTTTAGAGCAACATATTGAGAGCACACACATAGTTGATCCAACAGAACTGCTATGTTCCGAATGCGGTGAAGTGCTACCATCTAAGAGAGACATGCAAACTCATATACTGACACACAAGAACATTAAGGTAAAGAATGCAAAGAGGTTTGAATGCAGCCTTTGTGGTAAAGGGTGTTCGAGCCAGGCTATGCTGCTAATGCACGAGCGAGTACATACAAATGAGCGACCTTTCCCATGCCAACTATGTTCTTtacgttttaaaacaaaaactcattTACGGACTCATCAGTTGACTCATACACGGGAGAAGAAGTTTGGTTGCTCAGTTTGTATGAAGTTCTTTGCCCTCAAAGGGAACTTGGTTGTTCATCTTAGAACGCATACAGGGGAGCGTCCATATGTGTGCTCAATTTGCGGAGAAGCTTTCATAGACTCGAAATATTTGAAGAAACATAAACTAAAGAAACATTCTATAGATAATGTGCCGTGGAATCAGTACTAA
Protein Sequence: METWSDFCRCCLSANSEVSLLDSAQNVTEKFLEITTIEVKEDDGLPQKLCTDCYAIMNSAYQFRKQCIKMDNELRLQLNAVLDISKSENLSKYDDGDDDDIGNDPMKQLEAIIKQEPNDSDDDYYYVLVIDDPKDKGKEEQPITTNIKQEEYEEDIATTEAETTTTFIEQPTQSSQSQFEDSIESFLMSNTKVSANVPATILENEEESQENEDLDGAMNIDETQGSMSQDQIYEEMDVQDNENIESITSNVIKELPNSKNFIKILTTTDSDGTILLKGNERIQYLTDSQLVTNEDEDGDGLSQEVIFCEGDDSSQFQILKYDGSELVIEYADDSQIATVLQQEDGTFLCDCGEQFEDLGDYEKHQYKHNPAGEHLCNLCGKGFESAEILTGHMLLHSSTGLLITCPFCNQLIRRNALTQHIKYGHNNIKPRCNVCFKTFANPNNLKRHMMIHSGVREFECDICFKRFHQKITMQTHRLTHMHPFSCNQCDQSFETKTALADHKESEDCSKSKVIKVKEELMKTVKQEITTNLGKLLGYACSLCKKMFSVESALEQHIESTHIVDPTELLCSECGEVLPSKRDMQTHILTHKNIKVKNAKRFECSLCGKGCSSQAMLLMHERVHTNERPFPCQLCSLRFKTKTHLRTHQLTHTREKKFGCSVCMKFFALKGNLVVHLRTHTGERPYVCSICGEAFIDSKYLKKHKLKKHSIDNVPWNQY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00039097;
90% Identity: iTF_00037092;
80% Identity: -