Basic Information

Insect: Ochropleura plecta
Gene Symbol: -
Assembly: GCA_905475445.1
Location: FR997739.1:3531171-3534943[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 3.6e-06 0.00044 21.8 1.7 1 23 214 236 214 236 0.98

2 9 3.5e-08 4.2e-06 28.2 1.6 3 23 244 264 242 264 0.98

3 9 0.00012 0.014 17.0 0.3 1 23 270 292 270 292 0.98

4 9 1.3e-05 0.0015 20.1 1.7 1 23 298 320 298 320 0.99

5 9 2.6e-05 0.0032 19.1 1.7 2 23 500 521 499 521 0.96

6 9 3.4e-09 4.1e-07 31.3 1.6 1 23 527 549 527 549 0.98

7 9 0.0029 0.34 12.7 0.6 3 23 557 577 555 577 0.97

8 9 7.4e-05 0.0088 17.7 1.5 1 23 583 605 583 605 0.99

9 9 0.023 2.7 9.9 0.8 1 23 611 635 611 635 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	3.6e-06	0.00044	21.8	1.7	1	23	214	236	214	236	0.98
2	9	3.5e-08	4.2e-06	28.2	1.6	3	23	244	264	242	264	0.98
3	9	0.00012	0.014	17.0	0.3	1	23	270	292	270	292	0.98
4	9	1.3e-05	0.0015	20.1	1.7	1	23	298	320	298	320	0.99
5	9	2.6e-05	0.0032	19.1	1.7	2	23	500	521	499	521	0.96
6	9	3.4e-09	4.1e-07	31.3	1.6	1	23	527	549	527	549	0.98
7	9	0.0029	0.34	12.7	0.6	3	23	557	577	555	577	0.97
8	9	7.4e-05	0.0088	17.7	1.5	1	23	583	605	583	605	0.99
9	9	0.023	2.7	9.9	0.8	1	23	611	635	611	635	0.95

Sequence Information

Coding Sequence: ATGTTTGaCACGACAACACCGTACGTCCTCTACAAAGATGGAGTGGAGCGAGCCCCCCCGGGCACGCAGTGGGGCGGCGGAGTGCTGGACGGTGGCTACCAGCCCATGCAGCACCAGAGCCCTGGCGGGCCCTCACCGCAACCCGAGCCACAGCTTGCGTCACCCGCGCCCTCGCCCTACCCTCCTGCGCCGCCCCCAGATCCCACCGGCGCCGCAGAGGATGCTGCCCAGCAACTCGCTCAGCAACAGGCACAGCAACAAGCGCAACAACAACAGCAACAgcagcaacaacaacaacaacaaacttCTCCTGAACACATGCAAGTGGAACAGCAGCTCCAGAGCCAACCTCAGCCACAGCCTTCATCGCAGGATCATCTGGACCGCACGCCGTGCTTCGTCCCGCAGCCGGATCTGCAACAGCAGTACACGCCATATTTCAAAGAGGCGCGACCCACGAGCCACATGCTCAGCACGGGCGGCTTCCCGTTACACTATCTGAAACAGAACGGTGGTGTGCTGTCCCTCGAAGGTCCTCTAGACCAGTACGCGGCGCCTGACCTCCGCCACCTACCAGACATAGTGCAGCCTGAGCCGCCGAAGCCACGGAAGCACAACCCGAACTCAGAGCTCCGCCTGTTCAAGTGCCTGACGTGCGGCAAAGACTTCAAGCAGAAGTCGACGCTACTGCAGCACGAGCGCATCCACACGGACTCGCGGCCGTACGGGTGTCCGGAGTGCGGCAAGCGGTTCCGGCAGCAGTCGCACCTCACGCAGCACCTGCGCATCCACGCGAACGAGAAGCCGTACGCGTGCGTGTACTGCCCGCGCTCGTTCCGGCAGCGCGCCATCCTCAACCAGCACCTGCGCATCCATTCCGGTGAGAAGCCATATACGTGCGGCGAGTGCGGCAAACATTTCCGCCAGAAGGCCATCCTGAACCAGCACGTCCGCACACACCAAGGCGAGCGCTATTCACACATATATACCCCCCgccccgcgcgcgccgcccgcactGACCTGCCGGTCACTGCCGCCGGCGCCCGCGCTCCCCGCCGCCCCCCGCACAGTCGATTCGGTCTCGCATCCATTGGCCTTCCTATCAAACAAATTCTCGGTTCCCTCGTCGCCCGTGTAACGCAGGGTGCCCGCGAGACGCGGAACCGACCGCCGGACGTTCCCGTAACCGTTCCCAATGTTTCGCCACATCTCATCTTCAAGAACGGGACGACACCGACTCTATGGCCCCAGGACGTGCCGTTCCCGGCCGATGAGAACAAAGAAGAGATCCAGTCAACGTTCGGCGATGCGGACGGACAAAACGGAGATCCTCGCGGCTCCTGCTTCTCACCAGGTGATACGGCACAATACCCTGCTTACTTCAAAGATACAAAAGGTCTCAATCACTCAGTCTTCAGCTCGGGGCTTTCTCTGCAATATTTGAAGGGTGGCAAGCTACCAGACGTGCTCGGAGGACGGGCGATGCCCCTATACGTGCGCTGCCCGATATGCCAAAAGGAGTTTAAACAGAAGTCAACGCTGCTACAACACGGGTGCATTCACATAGAGTCACGTCCATACCCCTGTCCCGAGTGCGGAAAGCGCTTCCGACAGCAGTCGCACCTGACGCAGCACCTGCGCATTCACACCAATGAGAAGCCGTACGGCTGCGTGTACTGCCCGCGCTTCTTCCGCCAGCGGACCATCCTCAACCAGCACTTGCGCATCCACACCGGAGAGAAGCCGTACAAGTGCACCCAGTGCGGCAAGGACTTCCGGCAGAAAGCGATTCTGGACCAGCACACGCGGACACACCAGGGCGACCGGCCTTTCTGCTGCCCCATGCCCAACTGCCGGCGGCGCTTCGCCACAGAGCCAGAGGTGAAGAAGCACATTGACAACCACATGAATCCGCACGCGGCCAAGGCGCGGCGTGCCGACGCCAACAAGACACCGCGCCCGCTGCCACCCGCCGCCGCAGTGGTAAAGCCGGAGCTGTACTTCCCGCAGTGCTACGCGCCGCCGTTCCAGCAGTTCGGGGGCGGCGCCGAGTTCAAGCCGGTCGTGGGTCCGGGCGCGCCCGTGGCCTGCCTGCCGGCGCAGTga
Protein Sequence: MFDTTTPYVLYKDGVERAPPGTQWGGGVLDGGYQPMQHQSPGGPSPQPEPQLASPAPSPYPPAPPPDPTGAAEDAAQQLAQQQAQQQAQQQQQQQQQQQQQTSPEHMQVEQQLQSQPQPQPSSQDHLDRTPCFVPQPDLQQQYTPYFKEARPTSHMLSTGGFPLHYLKQNGGVLSLEGPLDQYAAPDLRHLPDIVQPEPPKPRKHNPNSELRLFKCLTCGKDFKQKSTLLQHERIHTDSRPYGCPECGKRFRQQSHLTQHLRIHANEKPYACVYCPRSFRQRAILNQHLRIHSGEKPYTCGECGKHFRQKAILNQHVRTHQGERYSHIYTPRPARAARTDLPVTAAGARAPRRPPHSRFGLASIGLPIKQILGSLVARVTQGARETRNRPPDVPVTVPNVSPHLIFKNGTTPTLWPQDVPFPADENKEEIQSTFGDADGQNGDPRGSCFSPGDTAQYPAYFKDTKGLNHSVFSSGLSLQYLKGGKLPDVLGGRAMPLYVRCPICQKEFKQKSTLLQHGCIHIESRPYPCPECGKRFRQQSHLTQHLRIHTNEKPYGCVYCPRFFRQRTILNQHLRIHTGEKPYKCTQCGKDFRQKAILDQHTRTHQGDRPFCCPMPNCRRRFATEPEVKKHIDNHMNPHAAKARRADANKTPRPLPPAAAVVKPELYFPQCYAPPFQQFGGGAEFKPVVGPGAPVACLPAQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00772240;
90% Identity: iTF_00888518;
80% Identity: -