Ople037361.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997749.1:7885052-7907042[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.29 35 6.4 0.6 1 23 236 258 236 258 0.95 2 27 0.024 2.9 9.8 0.2 2 23 330 352 329 352 0.94 3 27 0.02 2.3 10.1 4.0 1 23 357 380 357 380 0.95 4 27 0.013 1.6 10.6 1.1 1 23 385 408 385 408 0.96 5 27 0.2 24 6.9 0.2 2 23 411 433 410 433 0.93 6 27 0.21 25 6.9 1.1 2 22 440 460 439 460 0.93 7 27 0.055 6.6 8.6 0.5 1 23 521 544 521 544 0.89 8 27 0.039 4.7 9.1 0.3 3 23 573 594 571 594 0.92 9 27 0.3 36 6.3 0.4 2 23 626 648 625 648 0.95 10 27 0.25 30 6.6 1.3 2 20 653 671 652 676 0.91 11 27 0.031 3.7 9.4 2.0 2 23 721 743 720 743 0.92 12 27 0.028 3.3 9.6 0.0 1 21 816 836 816 837 0.93 13 27 0.006 0.71 11.7 2.4 1 23 872 894 872 894 0.96 14 27 0.11 13 7.7 0.1 3 23 923 944 923 944 0.96 15 27 0.0084 1 11.2 1.8 1 23 964 987 964 987 0.96 16 27 5e-05 0.006 18.2 0.5 1 23 992 1015 992 1015 0.96 17 27 0.0019 0.22 13.3 0.8 1 23 1020 1043 1020 1043 0.96 18 27 0.001 0.12 14.1 1.1 3 23 1047 1068 1046 1068 0.95 19 27 0.015 1.8 10.4 1.3 2 21 1076 1095 1075 1096 0.94 20 27 0.0051 0.62 11.9 1.7 1 23 1150 1173 1150 1173 0.94 21 27 1.2 1.4e+02 4.5 0.0 2 23 1246 1269 1245 1269 0.94 22 27 2.4e-05 0.0029 19.2 0.1 3 23 1276 1297 1275 1297 0.94 23 27 0.0042 0.51 12.2 2.8 2 23 1302 1324 1301 1324 0.94 24 27 0.013 1.6 10.6 5.1 1 23 1329 1352 1329 1352 0.96 25 27 2.9e-05 0.0035 19.0 5.0 1 23 1356 1379 1356 1379 0.97 26 27 0.00034 0.041 15.6 0.3 2 23 1386 1407 1385 1407 0.96 27 27 1.2e-05 0.0015 20.2 0.6 1 23 1413 1435 1413 1435 0.98
Sequence Information
- Coding Sequence
- ATGGAGTTTGACGAGATTGTGGTGAAGGAGAGCCCCGGGCTATGCCGGTGCTGTCTTTCTGAAGGATGCTACAAGGATTTGGGGACCGAATACACTTGGATGAACGAAACCGAGGTGTATGCTGATATGCTGTTGGAATGTTTTGATATTAGTATAACTCAACACAATGAAGGTCCTAACGGTCCAAACCGGCTCATCTGCGAAGTGTGCATCACTCGGCTAAGGGATGCATGCAACTTCAAGAAGCAGGTCATGGACTCTGAGAAAAAGTTTATTGATATGATGGGCAGGGGTGAATTTAGGCCTAAAATGCTAATTTACCAGACGCAGCTGAAGTGTGAAGATCCCAACATAGTCGAGGAGCCCATTGGAGACGCAGATGTGGAATATCTTGAAGATGAAATTGATTTTGGTGATGATGACCTGAAAGACGAGCTCACCCAGCCTTCAGTATCTGACGTCACCGTATCTACACTTCCCATTAAGGGCAAGCGAGGTCGTCCCCGTAAGAATACTCCTGTCAAAGCGGAGAAGAGAGCGAAAGTCGCCAAGCTTGATGATAAGGCGAAGGCTTCGAAAGCTGTTGCTAAAGGTAAAAAACCGAAGAAATACAAGAAAACAGAGTCTTCTTCGATGAGAAGACGACGGAATCTCCAAATTATATTCAACAACACGTCAATTATTCCATTTAAATGGCGCGGGAAGTATCTCTGTTTCTATTGCAGCAAAGACGTAGCCGAGTATACAGAGTTAAGGAATCATACCAAAGCACACGGAAACTGTTCAATTAAAGACCATTccttaaaagttttaaaaggaGGAAAGAATATGGAAATTAAAGTAGACATATCTTGTATTTCTTGCGAAGTTTGTGAAGAGATTTTACCGTCTTTCGATGAAATCATTACTCATTTGTATGATAAACATGCTCTCGAATACGATAAAGGAGTAGAAATGGCTATAGAAGAATATAAGCTTGCTACCCTCAGTTGTAACGCATGTGATGAAAGTTTTACATACTTCGGCTATCTCGTCTCTCACGTCAATAATAACCACCCCAAAAACTGTCACATATGCGAGAACTGCAATCAAAAATTCAATAAAAGAAGAGATTTGTTCTCTCACGTAAAAAACTACCATCGAGAAGGAGGCTACAAATGCGAAATGTGCCCACAAGTCTTCAACTCAATGAATATTTTAAGGAAACACAGAAATAACAGGCATTTGACTCGATGTAATATATGCAATTTGAAACTACCGTCAGCCTCCATGAGACAAAAGCATATCGATTTAGAACACCCGGATGATGGGTCTTTGCAGTGCGATGCTTGCTTCAAAGAGTTCCATACGAAAAGAGGCCTCAAGATGCATGCTAGAAAATGTAAAGGAGAAGAGATTTTCGGAATCGCGATCAAAGAAGAAAACTCAGCCATGGATTTAGATTTAGACCAAAATTACGATGATCCAGTCAAAAGACCTTGCGTCAGACAACTTCGGGAAAATATAGTCACAATCATAAATATGTCCACTGCAATACCTTTTAACTTTTATAAGAATAAATTCAACTGCTTTTACTGCTCCAAAGATTTCGGCGATTCAGATTTGATGAGGGAACATACAGTTTTAGAACACCCCGTTTGTGATGTCAACGAGAAATGTATTAAGAAGTGTAGGGAATCAATATCTTGCGTCAAAATCGATATTTCGTCGCTCGCCTGCAAAGTCTGCTTTGAATCTTTGACAAACTTGGACCATCTAATCGATCACTTAATCGAAAAACATGATGCTAAATACGATAAATCGATTACAACGTGTCTACAACCTTATAGGTTGATTAAAGACAGCATGGTTCATAGGTCTACCGCTCATTCTTCGACCTGCAACATTTGTTTTCAAGTCTTTGCGTCAGATGGAAAGAGGTTAGCTCATCTTAAATCGAATCACGTGACTGATAACCAATGTGGATTCTGCAATAAAATTCTAACAACTAAACAAGCTTTTATAAGACACGCCGCCAATTGCGAACATAAACCAAACGAAGAAACTATCATAATTGATGAAGAAGATAAAAAGATTTCTGTGAAAGAAATTAGGAAAGGTTTAGCAGCCATCTTTAATATGACTACCGCCCTTCCTTTCAAATTCTTTATGAATAGGCTACGTTGTTTCTACTGTACAAGAGACTTTAACTCTTGCGAAGACTTAAAGGAACATGCGTTGAACGAACATCCTCATTGCGATATATCTTTTAAATCTATGAGGTTAAGAAACAGATATGACGGTGTTCAAATCAAAGTTGATACTTCTGCTTTGTCTTGTAGACTGTGTGATATCTCCTTGCAGGATTTAAACGACGTGGTTGACCATTTAAGCAAAGAGCATAAGGTGAAATGCGACTTTTCTGTAGAGAGAAATCTACAGCCTTACAAACTGATTAAAGACAACTATCCATGCCCTATTTGTGGTGAAATTTATAGATACTTTGGGGTTCTACTCAAGCATGTAAATGGTCTACCAGGGCCGTACGAAGGCTGTACCTCTGAGAGACGACGGAAAAACTTGAAAATACTGTTCAACCATTCGACCATCATGCCTTTTAAATGGCGAGGAAAATACCTTTGCTTCTACTGCGGAAAAAACTATACAGAATACATAGAATTCAGAAAGCATACAAAATCCCACGGGCTATGCACCACTAAAGATTACTCCCTCAAATTAATTAAAGGAAACAACGTCGAAATTAAAATCGATGTCTCAGAAATCGGTTGTGACATCTGCAATGAACCGTTCAACAGATTCGAAGAAATAATCGATCATTTGATCTCGAAACACAATTTAGAATACAATAAAAACATCGATATACCCTTCCAAGAATATCGACTTGTCGACTATCGATGTTTACACTGCGAAGAACAGTTTTCTTATTTCGGTTATTTGGTAAAACATGTTAACAACGTACATCCGCAAAATTGTTTCATTTGCGATGATTGTGGAGTTACTTTCAATAAGAAGAGAGATTTGTCTATACATTTAAGGAATTATCACAGACAAGGAGGTTATCCTTGCGATTTATGTCTAAAGAACTTTGAAACACGTCTTATGTTACGGAGGCATCAAAACAATATGCATTTTAGACACTGCAAGAGTTGTGGTTTGCGATTCGCGTCCCTTTCTCTCCTACAAAAACATGTTCAAGTGGATCATCCACAAAATGAGAGTAATATGAAGTGTAGTTACTGCTCTAAAGAGTTCCATACTTCTTTAGGCTTAAGACAGCATATAAGCAAATGcaaagttaaaataatttctcAGATTGAACCACAAACTTCTTTCCTAAACGACAGTAACATAGAACCGAAGAAAAAGCAGAATATCTTACAAATAAGACAGAACATACAGTGTGTACTAAATATGTCAACTGCAGTGCCTTTCAAATTCTTCTCCAAATATTCCTGTTTTTATTGCTCAAAGAAGTTCGTAGAATTTGATGAATTACGCCAACATACCAGTCTTGAACATCCTGTATGCGATTTGAAGTCAAAATGCATGAAGAAATGTAAAGGAGAAAGGATAGCCGTCAAAATCGATATATCTACATTAGCTTGTAAATTATGTTGCTTACCTATGCCCAACTTAGAAGATTTGATCAACCATTTAATAGCTGAACATAAAGCGAATTACGATACGTCTATTTCTGGATGCTTAGAGCCTTTTAGGGTTATTAAGGACAATATGCCATGTCCTATATGCCCCGATACTGTATTCAGATACTTCGGGATTTTGCTTCGTCATATGAATTCCGAACACAGCAACAATAATCGAATATGCGATTTCTGCGGTCGAAGTTTCAGAAATGCAGCAAATTTAAATGTGCACATAACCTACGCACATACCGGTTCTTGCGAATGTGATATCTGTGGAGTTAAATATAAGAACCAATGGTGTCTGGCACGTCACAGAGCAAGAACCCACGATGCAAAAGACCATAAATGTCCAAAATGCCCCGAGCAGTTCCAGTCACAAtatcataaacaaaaacatctaatCAAAATGCACAATGTAGGACATAAATGTAGTTATTGCGGCAAAATGTTTACTAGAAACTCTTTCATGAAAGACCATGTTAGGAGAACACATTTGAAAGAGAAGAACATTCCTTGCTCAATATGTAACGAGAAATTTTTCGATAACTATCTTCTGAGGATGCATATGGTTAAACATGAGGGGGATAGGAAATTCAGTTGTACAGTTTGTGGGAAAGCCTTTTTGAGGCGAAGCAATTTGAGCTCGCATATGGAGATGCATAAGAAGTATGGGCATGTGCAGTTGTAG
- Protein Sequence
- MEFDEIVVKESPGLCRCCLSEGCYKDLGTEYTWMNETEVYADMLLECFDISITQHNEGPNGPNRLICEVCITRLRDACNFKKQVMDSEKKFIDMMGRGEFRPKMLIYQTQLKCEDPNIVEEPIGDADVEYLEDEIDFGDDDLKDELTQPSVSDVTVSTLPIKGKRGRPRKNTPVKAEKRAKVAKLDDKAKASKAVAKGKKPKKYKKTESSSMRRRRNLQIIFNNTSIIPFKWRGKYLCFYCSKDVAEYTELRNHTKAHGNCSIKDHSLKVLKGGKNMEIKVDISCISCEVCEEILPSFDEIITHLYDKHALEYDKGVEMAIEEYKLATLSCNACDESFTYFGYLVSHVNNNHPKNCHICENCNQKFNKRRDLFSHVKNYHREGGYKCEMCPQVFNSMNILRKHRNNRHLTRCNICNLKLPSASMRQKHIDLEHPDDGSLQCDACFKEFHTKRGLKMHARKCKGEEIFGIAIKEENSAMDLDLDQNYDDPVKRPCVRQLRENIVTIINMSTAIPFNFYKNKFNCFYCSKDFGDSDLMREHTVLEHPVCDVNEKCIKKCRESISCVKIDISSLACKVCFESLTNLDHLIDHLIEKHDAKYDKSITTCLQPYRLIKDSMVHRSTAHSSTCNICFQVFASDGKRLAHLKSNHVTDNQCGFCNKILTTKQAFIRHAANCEHKPNEETIIIDEEDKKISVKEIRKGLAAIFNMTTALPFKFFMNRLRCFYCTRDFNSCEDLKEHALNEHPHCDISFKSMRLRNRYDGVQIKVDTSALSCRLCDISLQDLNDVVDHLSKEHKVKCDFSVERNLQPYKLIKDNYPCPICGEIYRYFGVLLKHVNGLPGPYEGCTSERRRKNLKILFNHSTIMPFKWRGKYLCFYCGKNYTEYIEFRKHTKSHGLCTTKDYSLKLIKGNNVEIKIDVSEIGCDICNEPFNRFEEIIDHLISKHNLEYNKNIDIPFQEYRLVDYRCLHCEEQFSYFGYLVKHVNNVHPQNCFICDDCGVTFNKKRDLSIHLRNYHRQGGYPCDLCLKNFETRLMLRRHQNNMHFRHCKSCGLRFASLSLLQKHVQVDHPQNESNMKCSYCSKEFHTSLGLRQHISKCKVKIISQIEPQTSFLNDSNIEPKKKQNILQIRQNIQCVLNMSTAVPFKFFSKYSCFYCSKKFVEFDELRQHTSLEHPVCDLKSKCMKKCKGERIAVKIDISTLACKLCCLPMPNLEDLINHLIAEHKANYDTSISGCLEPFRVIKDNMPCPICPDTVFRYFGILLRHMNSEHSNNNRICDFCGRSFRNAANLNVHITYAHTGSCECDICGVKYKNQWCLARHRARTHDAKDHKCPKCPEQFQSQYHKQKHLIKMHNVGHKCSYCGKMFTRNSFMKDHVRRTHLKEKNIPCSICNEKFFDNYLLRMHMVKHEGDRKFSCTVCGKAFLRRSNLSSHMEMHKKYGHVQL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -