Basic Information

Insect: Ochropleura plecta
Gene Symbol: -
Assembly: GCA_905475445.1
Location: FR997734.1:14485329-14496448[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 7.8e-05 0.0093 17.6 2.2 1 23 283 305 283 305 0.97

2 20 0.004 0.48 12.2 0.6 1 20 311 330 311 333 0.94

3 20 2e-05 0.0024 19.5 5.6 1 23 352 374 352 374 0.98

4 20 9.4e-05 0.011 17.4 4.1 1 23 380 402 380 402 0.99

5 20 3.6e-05 0.0043 18.7 5.3 1 23 408 430 408 430 0.97

6 20 8.2e-06 0.00099 20.7 7.4 1 23 436 458 436 458 0.97

7 20 6.9e-07 8.3e-05 24.1 2.9 1 23 464 486 464 486 0.97

8 20 9.9e-05 0.012 17.3 6.7 1 23 492 514 492 514 0.97

9 20 9.8e-05 0.012 17.3 6.0 1 23 520 542 520 542 0.97

10 20 4.7e-07 5.7e-05 24.6 1.9 1 23 548 570 548 570 0.98

11 20 9.3e-06 0.0011 20.5 7.7 1 23 576 598 576 598 0.98

12 20 3.9e-05 0.0047 18.6 2.3 1 20 604 623 604 625 0.95

13 20 1.9e-06 0.00023 22.7 4.2 1 23 656 678 656 678 0.98

14 20 6.4e-06 0.00077 21.0 5.0 1 23 684 706 684 706 0.96

15 20 1.1e-05 0.0013 20.3 5.2 1 23 712 734 712 734 0.98

16 20 3e-06 0.00035 22.1 6.0 1 23 740 762 740 762 0.98

17 20 5.7e-05 0.0069 18.0 7.9 1 23 768 790 768 790 0.97

18 20 2.4e-05 0.0028 19.2 7.7 1 23 796 818 796 818 0.98

19 20 0.00071 0.085 14.6 0.3 1 23 825 847 825 847 0.96

20 20 0.3 36 6.3 4.9 1 23 858 880 858 880 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	7.8e-05	0.0093	17.6	2.2	1	23	283	305	283	305	0.97
2	20	0.004	0.48	12.2	0.6	1	20	311	330	311	333	0.94
3	20	2e-05	0.0024	19.5	5.6	1	23	352	374	352	374	0.98
4	20	9.4e-05	0.011	17.4	4.1	1	23	380	402	380	402	0.99
5	20	3.6e-05	0.0043	18.7	5.3	1	23	408	430	408	430	0.97
6	20	8.2e-06	0.00099	20.7	7.4	1	23	436	458	436	458	0.97
7	20	6.9e-07	8.3e-05	24.1	2.9	1	23	464	486	464	486	0.97
8	20	9.9e-05	0.012	17.3	6.7	1	23	492	514	492	514	0.97
9	20	9.8e-05	0.012	17.3	6.0	1	23	520	542	520	542	0.97
10	20	4.7e-07	5.7e-05	24.6	1.9	1	23	548	570	548	570	0.98
11	20	9.3e-06	0.0011	20.5	7.7	1	23	576	598	576	598	0.98
12	20	3.9e-05	0.0047	18.6	2.3	1	20	604	623	604	625	0.95
13	20	1.9e-06	0.00023	22.7	4.2	1	23	656	678	656	678	0.98
14	20	6.4e-06	0.00077	21.0	5.0	1	23	684	706	684	706	0.96
15	20	1.1e-05	0.0013	20.3	5.2	1	23	712	734	712	734	0.98
16	20	3e-06	0.00035	22.1	6.0	1	23	740	762	740	762	0.98
17	20	5.7e-05	0.0069	18.0	7.9	1	23	768	790	768	790	0.97
18	20	2.4e-05	0.0028	19.2	7.7	1	23	796	818	796	818	0.98
19	20	0.00071	0.085	14.6	0.3	1	23	825	847	825	847	0.96
20	20	0.3	36	6.3	4.9	1	23	858	880	858	880	0.99

Sequence Information

Coding Sequence: ATGATAAAAGCTCTTGTGGCCCATAGTCAGCAGCAAGCTGAGCTGGTGGCGGCCCAGAACGCTGGCAACAACACCCAGGTGTCAGTTAGTGCAGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGACACCATACGCAACAACACTTAATGCAGCAACAATTGATGGCACAGGCACGACCAGATCACAACAACCAACAGATTCAACTGACGGTAAGCGAAGACGGCATAGTGACTGTGGTGGAGCCCGCCGGTACAAAGATGGTCGACAAGGAAGAACTACACGATGCCATCAAGATGCCTAATGATCACACCCTGACTGTGCACCAGCTGCAACAGATAGTGGGACAACAGGTGATAGACAGCGTAGTTCGCATAGAACAAGCGACCGGTGAGCCGGCGAACATTCTAGTGACCCACAACCCTGACGGTACTACCTCTATTGAAGCCAGTGCCGCCGACCCTCTGATAGTCAAGGACGAGAAGAGTGCTAACAAAATAGAAACTGCACAGTTTGCTATACCTGCTGAGATAAAGGATATAAAGGGGATTGACTTAAAGAGTGTAGGAGCTATGGGCATGGAAGGTGCAGTAGTGAAGATCTCAGCCGGCGCGTCGGAGCATGACATTCACGCGATGTATAAAGTCAATGTAGAAGACCTATCTCAACTGCTTGCTTACCATGAAGTGTTTGGGAAACTTAATTCGGAAGGCCAACCGCAACAAGCAAAGGTAATAAGCGAGGTAGAAGTAGAAGTGGAAGCAGGTACCAGTGCAGCCATGTCAGAAGCGGAATCTTCCCCTGGTCACCACTCATGTGATATTTGCGGGAAAATATTCCAATTCCGATACCAACTAATTGTTCATAGGCGTTATCACGGCGAAAGTAAACCGTTCACGTGTCAAGTTTGCGGTTCCGCATTCGCTAATCCTGTCGAATTGTCCAGACATGGAAAATGCCATCTTgccGGAGATCCGAACGAGAGACACGCCAAGCGAATTGCCCAGGACAAGCCATACGCATGCACAACTTGCCACAAAACATTCTCCCGTAAAGAACATTTGGACAACCACGTTCGAAGTCATACTGGAGAAACTCCATACAGATGTGAATTCTGCGCGAAGACTTTCACCCGCAAAGAACACATGGTCAACCACGTACGAAAACATACGGGCGAGACTCCACACCGATGTGACATTTGCAAAAAGAGCTTTACAAGAAAAGAGCACTTCATGAACCATGTTATGTGGCACACAGGTGAGACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGTGAACTGTGCGGCAAGTCGTTTACGAGAAAGGAACACTTCACCAATCACATTCTGTGGCATACGGGAGAGACCCCGCACCGCTGCGACTTCTGCTCAAAGACGTTCACTCGCAAGGAGCATCTTTTGAATCACGTCCGTCAGCACACGGGCGAGTCACCTCACCGCTGCGACTTCTGCAGCAAATCATTCACCCGTCGAGAACATCTCGTCAACCACGTACGACAGCATACTGGGGAGACGCCCTTCCAGTGCGGATACTGCCCTAAAGCGTTCACAAGGAAGGATCACCTTgTGAACCACGTCCGCCAGCACACAGGCGAGTCCCCACACAAGTGCTCGTACTGCACGAAGTCCTTCACGCGCAAGGAGCACCTCACGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACCGCTGTACTTACTGCGCCAAGTCCTTCACGAGGAAGGAACACCTCACCAACCACGTCAGCGGTAACGACGGCGGTAGTACTAATTGGCATGTTGTTAATAATAAGGAATCGGAATGTACTCTGTTGCGCAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAGCATCTCAACAACCACATCCGCCAGCACACCGGCGTCATGCCGCACGCCTGCTCCTACTGCAGTAAGAGTTTCACCAGGAAGGAACATCTCGTTAACCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTTTTGTTCAAAGTCGTTCTCTCGTAAGGAACACCTTACGAACCACGTGAACCTTCACACAGGAGAAACGCCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGGAAGGAACACTTGACCAACCATGTCAGAATTCACACTGGCGAATCTCCCCACCGCTGCGACTTCTGCCAAAAGACGTTCACACGTAAAGAGCACTTGACGAATCACTTGAAGCAACATACCGGCGACACCGCGCATGTCTGCAAGGTGTGCTCCAAGCACTTCACCAGGAAGGAACACCTTGTCACGCACATGAGGTCGCACAGTTGTGGCGAGCGTCCATTCAGTTGTGGCGAGTGCGGCAAGTCTTTCCCCTTGAAAGGCAACTTACTGTTCCATGAACGATCGCACAACAAGAACAATGCCAATGCCAATAAGCAGTACCGATGTGAAGTCTGCTCCAAGGAATTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGCACACACGCCGAATGGTCGGAAGGCGCCGCGACCGGGGAAGCACCCGCTGAAACAGAAGACTGTACTGATAATAAGTGTATCAAAGTAGAGCCAGAAAGAACTGAAAGGAAACATGAAGTCAGggCAACAGTCGAAACGAGACCAGCCGAGCAGAACAATGTCGCACAAAGTCAACCCAACACACCAACTGTGATGATAACGAATAATCAACAAGTGCGTGCGGCAACCGTGAGCACAGTGGGCGCGGGCGCCGCCACATTCGTGTCGCACCACGCGGGCGGCCCGCTCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MIKALVAHSQQQAELVAAQNAGNNTQVSVSAGQATHQQVPNNRVEFVQHHNIDMGHHTQQHLMQQQLMAQARPDHNNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHDAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDIHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQQAKVISEVEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRIAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCDFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVSGNDGGSTNWHVVNNKESECTLLRRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVMPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANANKQYRCEVCSKEFLCKGHLVSHRRTHAEWSEGAATGEAPAETEDCTDNKCIKVEPERTERKHEVRATVETRPAEQNNVAQSQPNTPTVMITNNQQVRAATVSTVGAGAATFVSHHAGGPLAHHPVTVNY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -