Basic Information

Gene Symbol
SNAPC4
Assembly
GCA_905475445.1
Location
FR997745.1:10662157-10664604[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 2.3 3.9e+03 -0.7 0.0 22 33 244 255 241 260 0.80
2 5 1.5e-07 0.00026 22.3 0.1 2 45 276 321 275 322 0.86
3 5 2.7e-09 4.6e-06 27.9 0.1 3 44 330 375 328 377 0.93
4 5 7.2e-10 1.2e-06 29.7 0.0 1 43 381 423 381 425 0.97
5 5 1.9e-05 0.032 15.6 0.0 3 46 433 478 431 478 0.91

Sequence Information

Coding Sequence
ATGGATGTTGATACAATCGTAGAGGATTATGAGACCGACTCAGAAGTCGACGAGGGCGAAGGCGATGAAGGTTCGATTTTGGAAGCTGATACTATGAGCCAGCTCACCGAGGTGGTGGACGATGACGATTTACGCAGTTTGGGGAGGTCGCGTAGCGTACCTTCCATGCGCCGCACGATCAAACGAACTCCCAGTATCTTTAGAGAAAACAGTAAATCATCAGCAGCTGTAGCTCAAATTAGTCTGGCTCTGTCGGCAAACAAATTATTAGATGAAAAGCTAGAGAGACTGGAGAGAGTTCTTCTGTCTCGTCTAAACGAGTGTCGGCAGAAACTAAAAGTTGTGCAAAATAGTGATGGTACACATAATGATAAAAACGAAATATTCCGGTACGTTAGTTGTGGTAGACCCTACTTCAAGGACCGACAAAACTTCCCGGCTCCAGATAATGACGATGCTAAAATGGCAAAATCTCAGATGTATGATTTCTCCTTAGTTATTTCAGCACCCGGGTGGACAGTTAGAGATAAATCTCAATTGGTTAGTACAATCCACAAAATGtcaatagatataaaaaaaaatgagatgctCTCCAAAATAACTAACTTAAAACGCTTAAATGAACCAGGTAAAGATGTGGAAAAACAAATAATGGCCATTAGAAAGGAAATTGACAGAGTAAGTAAATTGCCCTTGACTAAAGTAGCTCTTCCATTAGATCAGGAATATGACTGGGAAATGAtagcaaacaaattaaacaggAGGCATACAGCACACGAGTATCAAGCCCTCTGGAAGTTATTCTTTCATCCTTCAATTAGCAAAAATGGTTGGGGTACCTCTGAACATGCCACATTGCAGAAAATAGCTCTCCGGCATTGTAAACAGGATTGGGATAAGATTGCTAGTGAACTTAACACTGGCAGGACCGGGTATCAGTGTTTTGTTTACTTTCGGACAAATATGAGCAACTCGTTTACTGGAACTAAATGGACCCCTGAGGAGATTACTTACCTTAAAAGATTGATAGAGTATTACAAAGAAGATAATTATATTCCATGGGGAAAGATAGCTGCGGCAATGGAAAACCGAACTAAAATTCAAATCtataataagtatttaagacTGATTGAACAAAGGAAAGGCAGGTTTCTTGCTGAAGAAGATTCAGTTATTCTTAATTGTGTGGAAAGATTTGGAACTAATTTTAGGAAGATGACCTCTTTTCTGCCTGGTAGATCTATGATCCAAATACGTGCCAGGTATCAAGTCTTAAGCAAAATGAGAGTATCAACTGTTTGGACTGTTGAAGATGATAAGAAACTTGTGCAGTTGATGTCTAACCCAGACTCAACCGTAAACTTTTCAACAGCTGCACAATTTTTTCCAGGCAGAAACAGAACAAAAATTCGATCTAGATTTATTACCTTACTTAAATGGATGAAAAAACATCCACATTTAGATTTGGAGCACGCACCACGACGTGGTGCGCGGCGTTTGAATCACGGACAAGCCAGTGAAAACCTAAATGATGCAGTTGAGAATTTGAAAAATTCATTGGTTACATCAGTCCAAAACAGGGCTAAGAAAAAGAAGTTAACTGAAGCCTCCACACACAAAGACTTGAATGATGCTATTGTTGTGATACTTGTGAATTGTATAATAAAGGAAAATGAAGCAGAATCCAAGAAAATTAATACACAGGATAGTATAATTTTAGGTCCTAATCATGTTATCTCATTTGCCGACTTAAACATTACAAACCTGCGCAAAATGATCATATTTTTGAATGCTTGTCTGGATGAGGCTAGTTATAAGGGAAGCATCTACAGTAAAGACTACCCGGCTTTAGGAGATAATAGTCAAGATGTTTCTTTAGTTAGAGTGAAATCCTATTCCCGGAAGACATTCAACCATCGTATAATGGGTCCTGATGCTCCTAATGTTTGGGGAACTCCAATGCTTTTTCCAAACACACGGATTATAAATTCGCCAAGCCAACGAAACTATGTGCTACCTCCACAACTGGCATGTATAACTGGTGTTAGAGCAATAATGTCATGTGTGATGGCAAATGGTCCATACACTGAAAATATTAACCTAAAGGTACTTTGCAAACGGAACATATTATTGAAGGAGTGTATAAATAACGCTCTTGAACGCTTCTATGTTTTGTTCACATGGCCAATGATCTTATCAAATGAAGAGCCTAGTGAATACACTGTCTCAAATTCACCTAGAATGAATTCTGTTTTTGCCAGACCTCCAACATTGCCAACTGTGCCTGAAGTTACAATCAATGCTAAATGtataaagaaatttcaaaatcAGCCCATCACTGAAAAAATTGATCTGGATGAGAATGTAGATAAGACAAATGATAAAGCTGTTGAGAAGCTTACAGAAACTGATGATGAGAAGGTAGAATCACTTCTATTTGCTGACTAG
Protein Sequence
MDVDTIVEDYETDSEVDEGEGDEGSILEADTMSQLTEVVDDDDLRSLGRSRSVPSMRRTIKRTPSIFRENSKSSAAVAQISLALSANKLLDEKLERLERVLLSRLNECRQKLKVVQNSDGTHNDKNEIFRYVSCGRPYFKDRQNFPAPDNDDAKMAKSQMYDFSLVISAPGWTVRDKSQLVSTIHKMSIDIKKNEMLSKITNLKRLNEPGKDVEKQIMAIRKEIDRVSKLPLTKVALPLDQEYDWEMIANKLNRRHTAHEYQALWKLFFHPSISKNGWGTSEHATLQKIALRHCKQDWDKIASELNTGRTGYQCFVYFRTNMSNSFTGTKWTPEEITYLKRLIEYYKEDNYIPWGKIAAAMENRTKIQIYNKYLRLIEQRKGRFLAEEDSVILNCVERFGTNFRKMTSFLPGRSMIQIRARYQVLSKMRVSTVWTVEDDKKLVQLMSNPDSTVNFSTAAQFFPGRNRTKIRSRFITLLKWMKKHPHLDLEHAPRRGARRLNHGQASENLNDAVENLKNSLVTSVQNRAKKKKLTEASTHKDLNDAIVVILVNCIIKENEAESKKINTQDSIILGPNHVISFADLNITNLRKMIIFLNACLDEASYKGSIYSKDYPALGDNSQDVSLVRVKSYSRKTFNHRIMGPDAPNVWGTPMLFPNTRIINSPSQRNYVLPPQLACITGVRAIMSCVMANGPYTENINLKVLCKRNILLKECINNALERFYVLFTWPMILSNEEPSEYTVSNSPRMNSVFARPPTLPTVPEVTINAKCIKKFQNQPITEKIDLDENVDKTNDKAVEKLTETDDEKVESLLFAD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01084202;
90% Identity
iTF_01084202;
80% Identity
-