Ople022375.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- -
- Assembly
- GCA_905475445.1
- Location
- FR997735.1:16463759-16464499[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-08 6e-06 27.1 0.0 4 40 17 54 14 57 0.93
Sequence Information
- Coding Sequence
- atggttcgccactatagaaaaaaaacggacaagTCATACACAATGGCGGAATTGCAGCAAGCAGTGCAagatgttaaaaataaagtaatgacGAGTTACCAAGCCGAAGAAATTTATGGCATTCCTAGATCAACCATTGTAACTAGAGTTTACAATAATCATGAACGACAACTCGCTCTCGGGGAAGATGTGGAAAGAAGAATTGCCCATAGCTTACATGTTATGGAAAAACATGGTTTCCCGTTAACTAGAAAAGAAGTAGCTGTTTTGGTATCTCAATATGTCCGCCAAAATGGAATCGCCAATCCCTTCAAAAATGATTTGCCAGGAAAAGACTGGCTCCAGGCATTTCAGAAAAGGAACAGTCTCTCAATCAAAAAGCCTCAATCCGTTGAGATAGCTAGAAGAAAGGCTTGCGATCCTTCTATTGTTTGTAGTTATTTCGATTTATTAGAAAAGGTATTGAAAGAACTGGACCTGACAGATAAACCGGAGCAAATTTATAACTTAGATGAGACAAGCATATGTAATGATCCTGTTAAAGGCAAAGTAATCGGTAAAAAAGGTTTCTGCTGTACTAGAACGACTAGTGGTCCCGGAAGAAATAATACAACGGTTTTGTTGGCGGCGAATGCTTCTGGCAACAAAGTTCCGCCGTTAATCATCTTTCAAGGAAAACACCTCTGGTCCGAGtggatgtttaaaaacatacaaacagctTGTGCTCTGGTTCTATTTTAG
- Protein Sequence
- MVRHYRKKTDKSYTMAELQQAVQDVKNKVMTSYQAEEIYGIPRSTIVTRVYNNHERQLALGEDVERRIAHSLHVMEKHGFPLTRKEVAVLVSQYVRQNGIANPFKNDLPGKDWLQAFQKRNSLSIKKPQSVEIARRKACDPSIVCSYFDLLEKVLKELDLTDKPEQIYNLDETSICNDPVKGKVIGKKGFCCTRTTSGPGRNNTTVLLAANASGNKVPPLIIFQGKHLWSEWMFKNIQTACALVLF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01230498; iTF_01230499; iTF_00172779; iTF_00951759; iTF_00850622; iTF_00851705; iTF_01091769;
- 90% Identity
- iTF_01230498; iTF_01230499; iTF_00172779; iTF_00951759; iTF_00850622; iTF_01091769; iTF_00851705;
- 80% Identity
- -