Ople000674.1
Basic Information
- Insect
- Ochropleura plecta
- Gene Symbol
- clz9
- Assembly
- GCA_905475445.1
- Location
- FR997721.1:11738253-11739422[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.5e-11 2.4e-08 34.8 0.0 1 37 25 61 25 70 0.86
Sequence Information
- Coding Sequence
- ATGGGACGTAAATATAAAAGGACTTACAGGCATACCAGAAATGGTAAATATTATACACCCTATAATTCATTTACGAAGGACGACCTGGAAACGGCAATGGAAgaagttaataataaacatatgTCAATTAGGGGCGcagcaaaacattttaatatcccTAAATCGACATTATCTCGTCACTGCATGAAGCACAATTTAATGCAAGAAAGAGCTGGACGTCCCACAATATTTAGCAGTGAagaggaacaaatatttgtggatTATTGTTTGCTCCTAAGTGAATGGGGTTTTCCGATGGATAAAATGGATCTAAGGGTTTTCGCTCAAcggtatttgaataaaataggaaaaaatgtGAGAAACATAAAGGATAATTTACCTGGTCCTGACTGGGCACAAAATTTTGTCGAAAGACATAAACACAGGCTGTCCCATCGGTTAGCTGCTAACATTTCATCAGACAGAGCTGAAATAACAACCGCCGTCATTgacaatttttttgaaaattattctAAGTCCGCACACGGGGTAAGCCTGGATAACATCGTTAATTACGATGAAACAAACCTCACCGACGACCCGGGtgctaaaaaatatatatttaaacgcGGAACTAAATACCCCGAAAGAATCGTTAATAACTCTAAAACGGCAGTTAGTCTTATGTTTAGTTGTGCAGCAAATGGCGAGTTGCTACCAATATACGTAGTCTATAAATCAGAACATTTATGGGATCAATGGACGTCAGGAGGTCCAGAAAACACACGATATAATAGGTCCAAAAGCGGGTGGTTTGACAATGTGTGCTTCGAAGACTGGTTTTTCACTGTAATGATgccttactttaaaaataagtcaGGACGTAAACTTGTTGTTGGCGACAACTTATCATCGCATTTTTCTGAACGTGTCTTAAAAAGCTGTCAAGAAAATGACATTTCATTTGTGTGTCTTCCTCCTAAGACAACCCATTTATTGCAACCACTAGACGTGGCATTCTTTGCACCGTTAAAACGCTATTGGCGTAATATACTAACACACTGGAAAGCAACATCAGGCAGGAAGCACAAAACCCTTATTAAATCAGCTTTTCCCAATTTACTCTTAAAGCTCTACAATAAAATTACCGAAAATGATACTGCTGCAAAAAACATTCAAAgcggtaattaa
- Protein Sequence
- MGRKYKRTYRHTRNGKYYTPYNSFTKDDLETAMEEVNNKHMSIRGAAKHFNIPKSTLSRHCMKHNLMQERAGRPTIFSSEEEQIFVDYCLLLSEWGFPMDKMDLRVFAQRYLNKIGKNVRNIKDNLPGPDWAQNFVERHKHRLSHRLAANISSDRAEITTAVIDNFFENYSKSAHGVSLDNIVNYDETNLTDDPGAKKYIFKRGTKYPERIVNNSKTAVSLMFSCAANGELLPIYVVYKSEHLWDQWTSGGPENTRYNRSKSGWFDNVCFEDWFFTVMMPYFKNKSGRKLVVGDNLSSHFSERVLKSCQENDISFVCLPPKTTHLLQPLDVAFFAPLKRYWRNILTHWKATSGRKHKTLIKSAFPNLLLKLYNKITENDTAAKNIQSGN*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01564548;
- 90% Identity
- -
- 80% Identity
- -