Oleu023845.1
Basic Information
- Insect
- Ochropleura leucogaster
- Gene Symbol
- Zfy1
- Assembly
- GCA_958449745.1
- Location
- OY288225.1:12123324-12151022[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.1 8 7.8 2.4 1 23 500 522 500 522 0.97 2 12 0.36 29 6.1 2.5 1 23 529 551 529 551 0.97 3 12 1.3 1e+02 4.4 1.4 1 15 555 569 555 578 0.82 4 12 1.4e-05 0.0011 20.0 3.7 1 23 583 605 583 606 0.95 5 12 0.003 0.24 12.7 1.0 2 23 613 634 612 634 0.97 6 12 1.6e-05 0.0013 19.8 0.8 2 23 648 669 648 669 0.98 7 12 0.34 28 6.2 3.3 3 23 675 696 673 696 0.95 8 12 0.00019 0.015 16.4 1.8 2 23 707 729 706 729 0.96 9 12 0.15 12 7.3 0.4 1 23 736 759 736 759 0.93 10 12 0.0083 0.67 11.2 0.7 5 23 771 790 770 790 0.93 11 12 5e-05 0.004 18.2 4.1 1 23 799 821 799 821 0.98 12 12 0.0026 0.21 12.9 0.5 1 23 826 849 826 849 0.95
Sequence Information
- Coding Sequence
- ATGGAGGTGACGTTGCCAGTGGTAGAAGTAACTGTGAAGCATGAACCGATGGACAGTGATAATACAGAGGGGGAGGACCAGAATGGATATAATCAACGAAGTGATGAAAcCTCAGTCAAACAAGAAGAGGTATCAATCAAGACGGAGCCCTATGAAGATGAGTCTCAAGATTTCATCAAGGACGAAGATCACGGTACAATCTCCGAGAATGATGCCAGGGTTGATGAAGAAGCACTGAATGATGAGTACAATAgaaacaggCAATCTAACGCCCCTTCAAGAAAACAGATTCTGGTGTTTCTAGATTTTCTGAATGAGCACAGGGACCTTGCTAACTGCATGTTGAGGGGACCTACTGGCCGGATTAGAGCCAACCAGCTCTGGGAAGTCATTGCAGAGAAGCTGAATGGCATCAGTGGTTGTATAAAGACTACGCAACAATGGCAAAGGGTATGGTCCGACAAGAAGTATCTAACGAGAAAAGCTGCAGCTGCCAGAGTCGCATCCTTAGCAGCTGGTGGAGCTCTCGCCCCAGAACTGACTCTTCAAGATGAGAAGGTCCTGGCTATTATTGGAGAACCAATACCACCGAGACGTGCCTTATTGAAGACTGCCACTCCTGAGCCAAAACCACAACCGCCAAAACAGCCACAAGATGTCTTAGTACGACCAATACCAATACCTTCAAAAGTAGAATTGGAGTCACCACCACCAGCAGTGCCCACAGAACCACTAATCCCTCATCTAGAAGCACAAAAACtaccaaaaaaactgtatactaGAAAGACCGACTTTTCCTCCATCCATCCTGTCGCGCCATCAACATCGGTTATTGTACCAGATGAGTTAGATCATCCAGATGTATTGAGACCCCCGGATGAGCCGGAGCCAGGAGATGAGAAACTGGATGACCTGTCATCTTCAGCTTCTATTTTTGATCCTCCGTCACCAAATACTACTCAACAagAACCAAATCGTCGAGGCCGTCGAGGAAGATCCCAAGCCGGCCTGGACCCTTACACAAAGAAATTAATCCATCTAGAAAATCGAAGACTGGAAAATGACGCCAAAAGAAACGATGCCTTAGAAGGAATCAAGAACGCCATGCAAGAAATGACGTCTGTACTCAAGTACAGGTTCTTAGCCTTTTATTTCACACAAGATGATATATCGCCGACTTCTTTACTTAAGTCCCTGTATGCTATTTTTGGCAGCATGCCAGCCACCCCAAATGAAGAAACTAAAGATCTGAAATCATTGCCGCTCAAGAAAAGATTTGAAAAGAAAGTAAAACAAGAAGATGGTGCCGAAGAAAAATCGGAAGAAAAGATTGTCCCTGATGATAATGATCAACAAGAGGATAACGCTCAAACTAAGATGGAAACCCCCCTGATGTATTCGTATGAAACGCTGCGGAACATAGAAATCGTGACAATTGACGAAGAAGAACGAGACAAGGAGTTCAAGGAGACGCTGAAGGCCCGCCAACACATGCGTCATGTGTGCAAGCACTGCGCGGTTGGCTTCGTACTGCAACATGCTTTTGATGTCCATATGAAGGTTCATGCGCCGGAATCAGGCGACCACGAATGCCCAATCTGCCACTCGCGTCTCAAAACCGCTGACATACTCTACCGCCATCGCTTACGTCACTTCCGTCGTTACCGGTGCCTGCTGTGCCGGACGCGGTTCAAGGACAAGGACACGGCAGCCTGCCATGTTATGAACGATCATACGGGTCAGACCTTCGAGTGCGATCATTGCGGCAGAGGATTTAAACGGCCGCAGTACTTGAAGAAACACGTCGAACAGCATCACACTAAGCCCCATAATCTTGAATGTGGCGTTTGCTTCCGGGTCTTCCACGAGCGTGGCTGGTATAGGACGCATATCAGgACTCATAACGAGGAGGTGCGAGCCAAGACGGTGCGCCTGCCAGCGACCTGCCCCATCTGTTCTCGCGACTACAAAAGCAAAGCCAGCCTGAAGCGCCATCTTTTAACACACGATGAAGATGTCCACTGCGAGATCTGCTACGAGAAGTGCAAGAATCGGATCACACTCGGCAAGCACTACATGAAAGTGCATAATGAGAAATATGTTGGgcTGCCAGAGCAGACCTGTACAACGTGCGAGCGGATATTCTCGTCGCGGGCGATGCTGAAACGACACACGCAGAGGATGCACAGCGATCGAACTAAGAAATACCAATGCGACTACTGCAAACGCCTGTATCTGACTAAAGGCGAGGTCCGAGCCCACATCACGTGGTCGCACATGCCGGCTGAAGTCCGCGGGGGGCACGCGTGCACGTGCGGCCGCATCTTCCGCAGCCCCTCCCTGCTGCGCGACCACAAGGCCAGGTTCCACGCCGCGCAGCCGCCGCCCAGGGTTCACCAGTGTGATCACTGCGACAAGGCTTTTGCGAACAAGCAAGTGCTGACCCGTCATAAGAAAGTCCATTCGGACGAGATGTATCCTTGCAAGGAATGTGGGTTGCTCTTCAAAACTCAACCTTATGTCAAAGTCCATTACCAACTCAAGCATTTGAACATGACAAGAGAACAAATTAAAGCGCAAAGGAAACGTAACAAAACACAGCTGATACAGAACAATATTAATAGGAGCACGAATTGGGAACCGCCAATCGCCAACAAGAAGATGAGTTCTGGTGTTGTTATTGAGATTGAGGAAGACCCTCTTTTTGTACCGGAGAAGAATATACAAATCAAAATTGAGCCAGAAGAAGATGAATTTCCAGTACCGACGTTCGAAACCTTTGTGAATATTGTCTAA
- Protein Sequence
- MEVTLPVVEVTVKHEPMDSDNTEGEDQNGYNQRSDETSVKQEEVSIKTEPYEDESQDFIKDEDHGTISENDARVDEEALNDEYNRNRQSNAPSRKQILVFLDFLNEHRDLANCMLRGPTGRIRANQLWEVIAEKLNGISGCIKTTQQWQRVWSDKKYLTRKAAAARVASLAAGGALAPELTLQDEKVLAIIGEPIPPRRALLKTATPEPKPQPPKQPQDVLVRPIPIPSKVELESPPPAVPTEPLIPHLEAQKLPKKLYTRKTDFSSIHPVAPSTSVIVPDELDHPDVLRPPDEPEPGDEKLDDLSSSASIFDPPSPNTTQQEPNRRGRRGRSQAGLDPYTKKLIHLENRRLENDAKRNDALEGIKNAMQEMTSVLKYRFLAFYFTQDDISPTSLLKSLYAIFGSMPATPNEETKDLKSLPLKKRFEKKVKQEDGAEEKSEEKIVPDDNDQQEDNAQTKMETPLMYSYETLRNIEIVTIDEEERDKEFKETLKARQHMRHVCKHCAVGFVLQHAFDVHMKVHAPESGDHECPICHSRLKTADILYRHRLRHFRRYRCLLCRTRFKDKDTAACHVMNDHTGQTFECDHCGRGFKRPQYLKKHVEQHHTKPHNLECGVCFRVFHERGWYRTHIRTHNEEVRAKTVRLPATCPICSRDYKSKASLKRHLLTHDEDVHCEICYEKCKNRITLGKHYMKVHNEKYVGLPEQTCTTCERIFSSRAMLKRHTQRMHSDRTKKYQCDYCKRLYLTKGEVRAHITWSHMPAEVRGGHACTCGRIFRSPSLLRDHKARFHAAQPPPRVHQCDHCDKAFANKQVLTRHKKVHSDEMYPCKECGLLFKTQPYVKVHYQLKHLNMTREQIKAQRKRNKTQLIQNNINRSTNWEPPIANKKMSSGVVIEIEEDPLFVPEKNIQIKIEPEEDEFPVPTFETFVNIV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -