Basic Information

Insect: Ochropleura leucogaster
Gene Symbol: -
Assembly: GCA_958449745.1
Location: OY288226.1:9121930-9124714[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 2.3e-06 0.00018 22.4 2.1 1 23 298 320 298 320 0.97

2 11 0.00029 0.023 15.8 0.9 1 23 395 418 395 418 0.96

3 11 0.0041 0.33 12.2 2.9 1 23 422 444 422 444 0.98

4 11 0.46 37 5.8 1.1 2 23 466 488 465 488 0.87

5 11 0.0061 0.49 11.7 2.0 1 23 492 515 492 515 0.97

6 11 0.0096 0.77 11.0 0.3 2 23 538 560 537 560 0.93

7 11 6e-06 0.00048 21.1 3.6 1 23 570 592 570 593 0.96

8 11 0.0098 0.79 11.0 1.1 2 23 610 631 609 631 0.96

9 11 0.015 1.2 10.4 1.1 1 23 637 659 637 659 0.95

10 11 0.45 36 5.8 2.6 1 22 665 686 665 689 0.90

11 11 0.032 2.5 9.4 0.0 3 23 745 765 743 765 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	2.3e-06	0.00018	22.4	2.1	1	23	298	320	298	320	0.97
2	11	0.00029	0.023	15.8	0.9	1	23	395	418	395	418	0.96
3	11	0.0041	0.33	12.2	2.9	1	23	422	444	422	444	0.98
4	11	0.46	37	5.8	1.1	2	23	466	488	465	488	0.87
5	11	0.0061	0.49	11.7	2.0	1	23	492	515	492	515	0.97
6	11	0.0096	0.77	11.0	0.3	2	23	538	560	537	560	0.93
7	11	6e-06	0.00048	21.1	3.6	1	23	570	592	570	593	0.96
8	11	0.0098	0.79	11.0	1.1	2	23	610	631	609	631	0.96
9	11	0.015	1.2	10.4	1.1	1	23	637	659	637	659	0.95
10	11	0.45	36	5.8	2.6	1	22	665	686	665	689	0.90
11	11	0.032	2.5	9.4	0.0	3	23	745	765	743	765	0.97

Sequence Information

Coding Sequence: ATGGAATCAACCGGCTTCCCTACAGAATCTGAGATTGCAGATCTACAAACAGACACAATCATAAAGGAAGAAGATGACATTGAACATGGAATCACAGAAGATATGCCACTTGATATCAAAGCTGAACACATAGATGACACAGGCACAGAGGAACATATAGATGACACTTTCACTCATGTACAATTAGATGTAAAACAGGAAATATCAATAAGTATAGAAAAAGAAGGTCCAGACTCTCAAAATGAAGATTCCATGTCGATAATAGAAGATTTTGATCAAGAATCTAAAGAAAATTTAGTTCATTATGCAACAGTACCTAAATTTGAAATGGATTGTGATGAAAAGTCTGAAGTTAAGGAAGAAAAGGTGTTGGGAGATGAATCTCTGGTAACATATGATTATCCGAATTTTGATGATGTTGGTAGTATGGATAGCAATGATGCGGATGCTTTGAATCAGGTGGAAGCATGTCTGCAGGATGATATGAATATCAAGAGCGAGAATTATGATGATGAGCAAAAAGAAGAACACgataaaatgaatataaaagAAGAATCAGAAATCGCAGTAACAGAAACACACTTAATTTCAAACAAAGTTATAAACACTACTTCCACAATAACAAACCCACACGACGGCCTTATAGAATCTAAAACAACTAAGACTCTAATCATGGAAATACTTCCAATGACCCAGACCAATATGGCATTCTCCAAACTTGATAACCCTGAAGAAATTCTACCTACAACTTATGATAATAGACACAACTATGTGGATTACGAAGAGTCTTTCCAACTAAATTCGATCACAGGCAACGTTTTATCCCTTGAACAAGAAGCTTATGGTCTACTCAAAGcgaaaggaaagaaaaaagaagtagGGGATACCCTACATGTCTGCCCAAAATGCCCTAAAACATACAGACAGAAGACTTATTTGAAAAGGCATTTAGCTGTCCACGACGCTATTGAGAAACGCGCTCAAGGACACCTTAGAAGCCAAATAACTAAGAaagagaataaaaacaaaaaattaaaagcagAACTTGAGAGCTTGCcagttaaaaaagaagaaaaaggtaAGAAAGAAGGTTACGAATGTACTTGTGGCCAATCTTTCCAAAGACGGAGCAGAATGGAGACCTGTCTGAGATCCCACAATCTGTTTTCTGACATAAAAACTTTTCCTTGTATGTCTTGCAACAAACAGTTCAAAGATAAAGAAGAATTAGCCCTCCATCGAAAAAGATTACATAGAAAGAGATTCCCTTGTAAATTCTGTCCAACAGACTATCACACGCGAAAAGAACTCTTCAAACATTTGCAAGTCCATCAAAAAGTCCAATTGATGGAGTACAAAGTCATTTCGGAAGTCGTCAAAGGTAAACAAAAGCTCAAATGCTTCATGTGTCCAAAGAGTTACATGGAGCTGTCAGATTTAAAGTGCCACGTCATGGATGACCATAAAGAACCATACAGCTGTCCTAGATGCAAAAGAACCTTCTCGAAAATCATAGACTTCGGCAATCACACCAAGACTTTCCACCCGGAAGTCGAAGGGCAATCCGTCTTAGATGTTCTAGAAGCCTTTTCAAAGTTAGTGAAAGCTTGGAAATGCGAAGAATGTGGTCAACAGTTCCATGAAGCAGATAAACTGGCAATGCATCAAATTGAGAAGCATAGTCCGGATTTGAAAGCTGAGATGCAATTCCAATGTACAGATTGTCGAAGAGTTTTCGTCAGTCAAAAAAGTCTAACATCCCATAGACGCATACACCATAGCATGGAAAAACCTGAAGAAGAACCAGAGCCTGTAGAACAAGGAGTCATGTGTTTAGAATGTCGAAAAATCTGCAAGGATATGAACGCGTTAGTCTCCCATATGCGCTATCATTCGCAGGACCGAAAGTTTCCGTGCAAATTCTGCGATTTTCGCTTTGCTAcgcaagaaaaaagaaaagcgCACTCAGAAATACACACAGGCGATATGAAATATGTCTGTTTCATATGCGAATACCAGTGCAGTTCAGAAAATCGACTAAAACAACACAAATTATCGCCTAAACACGTTAATATGAAAGAGTTTTTGTTGACTGGAAAGCCGTTGGTGCAGGAAGCTCAATCCTCTTCTAAACAGGAGAAGATAAAAGAGACTTTGAAAAAGAAAGAGTGGCACGTGAaggagaaaaagaaaaaagagaagTCGCGGAGTGAATTGCGTTGTGAAGTGGCTTGTGACATCTGTGGGGATAAGTTCCCGAGTGAGAGTGAGATGCTGGAACATAAACTGACTCATCCCTTTATAGAGTTCCCTAATGAAGACACGCCGAGTAGGATATTCTTTAAGTAA
Protein Sequence: MESTGFPTESEIADLQTDTIIKEEDDIEHGITEDMPLDIKAEHIDDTGTEEHIDDTFTHVQLDVKQEISISIEKEGPDSQNEDSMSIIEDFDQESKENLVHYATVPKFEMDCDEKSEVKEEKVLGDESLVTYDYPNFDDVGSMDSNDADALNQVEACLQDDMNIKSENYDDEQKEEHDKMNIKEESEIAVTETHLISNKVINTTSTITNPHDGLIESKTTKTLIMEILPMTQTNMAFSKLDNPEEILPTTYDNRHNYVDYEESFQLNSITGNVLSLEQEAYGLLKAKGKKKEVGDTLHVCPKCPKTYRQKTYLKRHLAVHDAIEKRAQGHLRSQITKKENKNKKLKAELESLPVKKEEKGKKEGYECTCGQSFQRRSRMETCLRSHNLFSDIKTFPCMSCNKQFKDKEELALHRKRLHRKRFPCKFCPTDYHTRKELFKHLQVHQKVQLMEYKVISEVVKGKQKLKCFMCPKSYMELSDLKCHVMDDHKEPYSCPRCKRTFSKIIDFGNHTKTFHPEVEGQSVLDVLEAFSKLVKAWKCEECGQQFHEADKLAMHQIEKHSPDLKAEMQFQCTDCRRVFVSQKSLTSHRRIHHSMEKPEEEPEPVEQGVMCLECRKICKDMNALVSHMRYHSQDRKFPCKFCDFRFATQEKRKAHSEIHTGDMKYVCFICEYQCSSENRLKQHKLSPKHVNMKEFLLTGKPLVQEAQSSSKQEKIKETLKKKEWHVKEKKKKEKSRSELRCEVACDICGDKFPSESEMLEHKLTHPFIEFPNEDTPSRIFFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00810484;
90% Identity: iTF_01063189;
80% Identity: -