Basic Information

Insect: Ochropleura leucogaster
Gene Symbol: -
Assembly: GCA_958449745.1
Location: OY288229.1:7695930-7707157[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.3 24 6.4 2.1 1 23 403 425 403 425 0.95

2 9 2.6e-06 0.0002 22.3 0.9 1 23 472 495 472 495 0.97

3 9 0.00014 0.011 16.9 0.3 2 23 501 522 501 522 0.97

4 9 2.3e-05 0.0018 19.3 3.3 1 23 530 552 530 552 0.97

5 9 8.5e-06 0.00068 20.7 0.8 1 23 557 579 557 579 0.96

6 9 4.7e-06 0.00037 21.5 0.9 1 23 588 610 588 610 0.99

7 9 5.5e-06 0.00044 21.3 0.8 1 23 616 639 616 639 0.97

8 9 0.1 8.1 7.8 0.5 1 14 645 658 645 668 0.82

9 9 2.6 2e+02 3.4 2.0 1 23 676 699 676 699 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.3	24	6.4	2.1	1	23	403	425	403	425	0.95
2	9	2.6e-06	0.0002	22.3	0.9	1	23	472	495	472	495	0.97
3	9	0.00014	0.011	16.9	0.3	2	23	501	522	501	522	0.97
4	9	2.3e-05	0.0018	19.3	3.3	1	23	530	552	530	552	0.97
5	9	8.5e-06	0.00068	20.7	0.8	1	23	557	579	557	579	0.96
6	9	4.7e-06	0.00037	21.5	0.9	1	23	588	610	588	610	0.99
7	9	5.5e-06	0.00044	21.3	0.8	1	23	616	639	616	639	0.97
8	9	0.1	8.1	7.8	0.5	1	14	645	658	645	668	0.82
9	9	2.6	2e+02	3.4	2.0	1	23	676	699	676	699	0.93

Sequence Information

Coding Sequence: ATGTTGCACAACACAGGGCCTTATGGTCCAAATGAGACGCCTATAAACATGGGAGCGCCCGTTAATATGACACCAATGAGTGGTCACATGAATCTCGCTcataacattaataatttaagcAAAATAGCCCAGCAAGGCATCCCAGCGCCTAGCGGGCAGTACAACCTACCGGACTATGCACATTACAACCATTCTTCTATAACCATGCCGTCGCAAATGGGTCAGTTTCCCTATCAACAACTGGGTTTCCAACATACTTATGCGAACCAAAACGCGAATAATATGAACGATCTACCATTCCCAAACGGTATGTTTCCTATGAATTTGAATATACAGAACGAACATAACGCCAATATGATGAATTATGCTTACGATAAGCGAGTAATTGATTCAACCAGGCAAGAAAACTTCAAAGATCAAAATATACGTAAAATGCCTTTAAATATACCTCAGTTACCAAATAAGATGTATACTAAACACATTGGCGACAACGACGACTATGTACATAACAATATGTATCAAGAATCTGATCATAATCTAGATTTAAGCATGAAAACTCAAGAAAAATTACAAATTGACAGCACAAGGCggaaaaacattgaaaatacagtcaaattaattgaaaatatcCTCATCCATTCATCGAATAAACCCAAGGAAGTACCGGTAATTGTTCCGATTGAACCAAACACTGACAAACCATCTAATAAGAtgataagaaaattaaaaaaaagtataaaagttAAGAAAAATATCTCCGAAGTTAATACTGAACTATTACCAGAATCTCCATCTTCCTCCATCTCCTCCTACTCAGAATTAAGGAAAGACGATACACATAatgtcaaaattaaacaaaattttgaagaAAATGACACCAATGAAGAACAATATCTTGGAGAAAATGATAGTAAGGATGGTCGAAATACTTCAGAAACTCATGCACCATCAGAAGATGATGAGTTACAACCTATAGCAATAACTCAACACTTCATCAGGGAAGATGCTGAAGTGACTACAGACAATAGTATCGTAATAAAGGTTGAGAAAGCAAGCTGGGCGGACTCGGATTGTTATTCTCCGTTCTTGAAAGACAATCATGGGTTTGAGCGAGATGAGCACATGAGCTATAGAATAATTGAGGGTGATTGTAGTGTTGAGCAAGCCATTGTTTGCTATAAAAATGATATAAAACCAGAAGGAGTTTTCGAATGTCCGCACTGCGCTCTCCTCTTCAAACATCCAAAGAGGTTTATAATCCACAACAATTGGCATACATTTGGCCTAACGAATATAAAACGTATCGAGTACGCAAAGGTAAAAGAACAAAAGAGGTTTGAACGAAAAGAGGCCAAGATTTTAGAGCGAATGAAGTCTAAGGAGGTGACGGATATGAAGACAGATGGAAAGGTTTTTCCTTGTAAGGATTGTGATAAAGTTTTCAGTGCTAAGGGAAGCTTGAAGAACCATCGGCAGAGGACACACCCAACTCGCATCCGTGAATGCAAGATATGTCACAAAGTAATATCGAGCTGGATGGCTCTCCGAGCACACCTGGCGACTCACTCCGCGGACTCAGGGCTTGGCTACCAGTGTAGCGAGTGCCCCAAGAGGTTCAAATACTCACACTCGTTGGCTAAGCATTCCGATACTCATTTGGAGAAAGTGCACGCGTGCGCCGACTGCCCCAAGAAGTTCGGTTCACAGGCTCTGCTCAAGATGCACATGAAGACACACGAGCGGGTGTTACGCGGCGCCACGTTTCGATGCACTTATTGCGGCAAAGGATTCTTCGAAGCTTATAGTTTACAGgTCCACGAAAGAACACATCGTAATGAAAGGCCATTTACATGTGACATCTGTAACACCAGCTATGGGACTAACTCTAGTCTTAAGAGACACGTCAAAGTGTCCCACAACACAGCGAAGCCCTATCAGTGTACAGTGTGCCGGCGCAACTTCTCAACGGAGTCCATCAGGGACAAACATGAGCTGAGACTCCATGGGAAGCCAGAGGACTTCAAGTTTCCATGCAAACAGTGCTCTAACAAGTATTTGAAACTTAAAGATCTTCAGAAACATGTCTACAAAATGCATCCTAAGGGCAAAAGGAAGGAAAAAGATGACGAAGAAGAAGCAAGCGAATCGGAATAG
Protein Sequence: MLHNTGPYGPNETPINMGAPVNMTPMSGHMNLAHNINNLSKIAQQGIPAPSGQYNLPDYAHYNHSSITMPSQMGQFPYQQLGFQHTYANQNANNMNDLPFPNGMFPMNLNIQNEHNANMMNYAYDKRVIDSTRQENFKDQNIRKMPLNIPQLPNKMYTKHIGDNDDYVHNNMYQESDHNLDLSMKTQEKLQIDSTRRKNIENTVKLIENILIHSSNKPKEVPVIVPIEPNTDKPSNKMIRKLKKSIKVKKNISEVNTELLPESPSSSISSYSELRKDDTHNVKIKQNFEENDTNEEQYLGENDSKDGRNTSETHAPSEDDELQPIAITQHFIREDAEVTTDNSIVIKVEKASWADSDCYSPFLKDNHGFERDEHMSYRIIEGDCSVEQAIVCYKNDIKPEGVFECPHCALLFKHPKRFIIHNNWHTFGLTNIKRIEYAKVKEQKRFERKEAKILERMKSKEVTDMKTDGKVFPCKDCDKVFSAKGSLKNHRQRTHPTRIRECKICHKVISSWMALRAHLATHSADSGLGYQCSECPKRFKYSHSLAKHSDTHLEKVHACADCPKKFGSQALLKMHMKTHERVLRGATFRCTYCGKGFFEAYSLQVHERTHRNERPFTCDICNTSYGTNSSLKRHVKVSHNTAKPYQCTVCRRNFSTESIRDKHELRLHGKPEDFKFPCKQCSNKYLKLKDLQKHVYKMHPKGKRKEKDDEEEASESE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00302464;
90% Identity: iTF_01085702;
80% Identity: -