Basic Information

Insect: Ochropleura leucogaster
Gene Symbol: -
Assembly: GCA_958449745.1
Location: OY288218.1:6732446-6748309[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.3 24 6.4 1.1 6 20 12 26 6 28 0.86

2 14 0.021 1.7 10.0 0.6 2 20 34 52 33 54 0.93

3 14 0.76 61 5.1 0.5 1 12 212 223 212 232 0.83

4 14 0.43 35 5.8 0.1 1 19 365 383 365 383 0.98

5 14 0.00023 0.018 16.1 0.4 1 23 390 412 390 412 0.98

6 14 0.00073 0.058 14.6 2.0 1 23 426 448 426 448 0.99

7 14 0.51 41 5.6 0.7 1 23 473 494 473 494 0.89

8 14 0.00099 0.079 14.2 0.4 3 23 502 522 500 522 0.96

9 14 0.00084 0.067 14.4 2.3 1 23 538 560 538 560 0.98

10 14 1.6e-06 0.00012 23.0 4.5 1 23 566 588 566 588 0.98

11 14 0.00057 0.045 14.9 5.2 1 23 594 616 594 616 0.97

12 14 9.7e-06 0.00078 20.5 0.4 1 23 622 644 622 644 0.98

13 14 0.00047 0.037 15.2 1.1 1 23 648 670 648 670 0.98

14 14 8.8e-05 0.007 17.5 0.1 1 23 678 701 678 701 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.3	24	6.4	1.1	6	20	12	26	6	28	0.86
2	14	0.021	1.7	10.0	0.6	2	20	34	52	33	54	0.93
3	14	0.76	61	5.1	0.5	1	12	212	223	212	232	0.83
4	14	0.43	35	5.8	0.1	1	19	365	383	365	383	0.98
5	14	0.00023	0.018	16.1	0.4	1	23	390	412	390	412	0.98
6	14	0.00073	0.058	14.6	2.0	1	23	426	448	426	448	0.99
7	14	0.51	41	5.6	0.7	1	23	473	494	473	494	0.89
8	14	0.00099	0.079	14.2	0.4	3	23	502	522	500	522	0.96
9	14	0.00084	0.067	14.4	2.3	1	23	538	560	538	560	0.98
10	14	1.6e-06	0.00012	23.0	4.5	1	23	566	588	566	588	0.98
11	14	0.00057	0.045	14.9	5.2	1	23	594	616	594	616	0.97
12	14	9.7e-06	0.00078	20.5	0.4	1	23	622	644	622	644	0.98
13	14	0.00047	0.037	15.2	1.1	1	23	648	670	648	670	0.98
14	14	8.8e-05	0.007	17.5	0.1	1	23	678	701	678	701	0.96

Sequence Information

Coding Sequence: ATGGGAGGCCAGTCGTTGAATTGTCCCCTTTGCTGCAATACAACTTTTAAGTCCAAACAATCTCTTCTTGAGCACTTGACGAATGCTTTAGATAATGTATATTGCCCTGTATGCAACTACAAATGCACCTCGTTACAACACCTTGCATTGCATTTGGCTCAGGATAATTGTCAGCCATCTAGCAATGTACATACTATAATATTTGAGCGCCGAGTAGATGAGGATGGTATTGAAAATACATCTGATATTGGAAATTCTGAAATTAATGTATATCAGAGTGAAATCAAATCTAATGATGGAAGCCACTTTACAACAGAACAAACTTATGAAGCTGCAGCACATGTGGACCCAAATGatgcaaataaaatgtatgtggAATTATTTACCAAACAGTTGAAACCGTGCCTACAAACTAGGGAATTTAAACTGGTGAAAGAAAATGGGGAAAGCCGGTACATGCTTGTCACACAGGATGACTCTGATGGAGGAAGCACTATTGTGACGAAACAAAATACTGACGGAACCATATCACTGACTACAGTTAAAGATATGAATCTTGATGCCGAGAACTTAATCACACCGGACAATGTACAAGAACACCAGGAAGAAATACAAGAAGATAATCAAGAGATTTACAGCTGTAACACTTGCAAAGTATCCTTCTCTTCAGTAATAGAGCACATTCAGAACTACCATAATGATCAGGATGTGGTTGTTGAGgaGCCAATGGAAGATGGTCAGACTGAGTCAATGCCTGAATACGATCCAATAGACAATGAAGACTCATTGGTGACGACAGACAAGCAGGCACCTCGGCGTGTTATTACGGACACGGGCGATATTGTGGAGGAACCACTCATGTTTAAATCTGGTGATCAAATAATATCGTCCACTCCAGtaacaACACAAGATTCGAATGAACCAGATAAAAAAGAACTGCGCGTCGTCACGAAACGTTTCCTGCAAGTGGACAAGCTTTGCGATAGTGTCATCAAAGATGCCATCCGGACTGACGCAAAAGACAAAAGCGGCCCATATCACAAAGTAATCGTCAAAGAAGTGCCAACGGACAGTGGTTTCGCCATCAAGATGTACCAGTGTTTAGCCTGTGACATATCTGTCACCAACTTGGACGAGTTTAAAACACATCCGTGTAaagtattaaaatatcCGTGCCTCTACTGTCCTGTGGCATATGAAAACTCGAAATCTCTGTGTGCACACATGAAAGCCCATAAAGTGAAAAcagaagcAATTGTCCCTGAACCAGTATCGTACGAATGTCCTGTATGCTGCACAGTCTTCCCAACTAACAAGTCTTTGAAACTGCACAAGCGGATGCACGATCCTATCAAAGCTCGGCCTATAGAGCCTCCGATAGAAAACACAGACGGTTCAGAAGTGAGTGTGGGCAGATTTCGATGTAACGTCTGCAACAAAATGATACCCAATGACTACAGGACCATCCACCAAAATTCACATAAAACTTCGGAGAAAATGAACTGTGGAATTTGTAACAAGAAGTTCACGTCAGTGGAGTTTTTGGAAATGCATACTAATGTCCATAATTTGGATAAGGCGCCAATAAACAATCAAGATAAGAACCTACCGTACAGTTGTTTGTATTGCAACAGAAGATTTGCGAGGCCGCACGAGAAAGTGAAACATGAAAGGATACACACAGGTGAAAAGCCGCACTCGTGCGAGATCTGCGGCAAGTCGTTCCGCGTGTCGTACTGCCTCACGCTGCACATGCGCACGCACACCGGCGCGCGGCCCTACGCCTGCCCGCACTGCGGCAAGAGGTTTAAAGCCCACAGCGTGTACAACCACCATCTGCTAACGCACTCGGAGGTTCGCGCCTACAAGTGCCCATTCTGCCCCAAAGCGTTCAAGACCTCCGTGCAACTCGCCGGACACAAGAACTCGCACACGAAGCCATTCTCTTGCCAACATTGTAATCGGCCATTCGCGTCCTTATACGCGGTGCGCGTCCACACAGAAACTCACGCTCGCCAGAACAACCTGAAATTCTCTTGCGAACTATGCGGCGCCAGCTACGCGAGAGCCTTCGCTCTTAAGGACCACATGAAGCAAGCGCATAGCGAACAGGAACAGGCGCAGTCGCCGGCACGAACAATTGCTGGAGATGATGAGTGGATAATGAAAGGTAGCCCTGATACGGATAGTGTTCTCAACAAAGATTTGACGCATGAGaTTGATCTGGGGATAACTGGCAACGAACTGATAGTTCCTTGA
Protein Sequence: MGGQSLNCPLCCNTTFKSKQSLLEHLTNALDNVYCPVCNYKCTSLQHLALHLAQDNCQPSSNVHTIIFERRVDEDGIENTSDIGNSEINVYQSEIKSNDGSHFTTEQTYEAAAHVDPNDANKMYVELFTKQLKPCLQTREFKLVKENGESRYMLVTQDDSDGGSTIVTKQNTDGTISLTTVKDMNLDAENLITPDNVQEHQEEIQEDNQEIYSCNTCKVSFSSVIEHIQNYHNDQDVVVEEPMEDGQTESMPEYDPIDNEDSLVTTDKQAPRRVITDTGDIVEEPLMFKSGDQIISSTPVTTQDSNEPDKKELRVVTKRFLQVDKLCDSVIKDAIRTDAKDKSGPYHKVIVKEVPTDSGFAIKMYQCLACDISVTNLDEFKTHPCKVLKYPCLYCPVAYENSKSLCAHMKAHKVKTEAIVPEPVSYECPVCCTVFPTNKSLKLHKRMHDPIKARPIEPPIENTDGSEVSVGRFRCNVCNKMIPNDYRTIHQNSHKTSEKMNCGICNKKFTSVEFLEMHTNVHNLDKAPINNQDKNLPYSCLYCNRRFARPHEKVKHERIHTGEKPHSCEICGKSFRVSYCLTLHMRTHTGARPYACPHCGKRFKAHSVYNHHLLTHSEVRAYKCPFCPKAFKTSVQLAGHKNSHTKPFSCQHCNRPFASLYAVRVHTETHARQNNLKFSCELCGASYARAFALKDHMKQAHSEQEQAQSPARTIAGDDEWIMKGSPDTDSVLNKDLTHEIDLGITGNELIVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00445469;
90% Identity: iTF_01064919;
80% Identity: -