Oleu023991.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ochropleura leucogaster
Gene Symbol
-
Assembly
GCA_958449745.1
Location
OY288226.1:1917291-1949579[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 9.6 7.7e+02 1.6 1.6 6 15 58 67 56 70 0.75
2 12 0.92 73 4.8 0.1 1 23 497 519 497 519 0.95
3 12 0.00029 0.023 15.8 0.4 1 23 532 554 532 554 0.97
4 12 0.00058 0.047 14.9 0.9 1 23 560 582 560 582 0.98
5 12 1.9e-05 0.0016 19.5 2.6 1 23 589 611 589 611 0.99
6 12 2.6e-06 0.00021 22.3 0.4 1 23 617 639 617 639 0.93
7 12 8.6e-08 6.8e-06 26.9 0.1 1 23 645 667 645 667 0.98
8 12 5.9e-06 0.00047 21.2 1.9 1 23 673 696 673 696 0.96
9 12 0.00012 0.0093 17.1 2.6 1 23 702 725 702 725 0.96
10 12 8.9e-05 0.0071 17.4 2.3 2 23 732 753 731 753 0.97
11 12 1.3e-05 0.001 20.1 1.5 1 23 759 781 759 781 0.97
12 12 0.033 2.6 9.4 0.1 1 23 787 811 787 811 0.93

Sequence Information

Coding Sequence
ATGAACCAGACTTGTTTCATCTGCAATAATAGGGCTGGCCTTTCACTTAGAAATGCTTCAAGCCTGTTCGGAGAGCAAaatACACTACAATCTGGAAAAAAGGTATCTGAGGTGGTGGGTGAGATTATAGGAAAACCTGTGGTAGAAAATAAAGTACATACTAGTATTTTATGCAAGAAGTGCTTTAAGACATGCTCCGAGTATGATAGTATTCAAGTTAGattaaaaacaataaaaacggaTTTACTAGAACAATTCAAACAGTCATTGCCTAGTCATAATTTAGACTATGATAACTATGAGAAGAATGTTTCTTCACCACCGAAACCTAAACCATTACTGGGGAAGAAGCTGGTGTTGCCAGCATCAAAATTACAACCAATACCACCGGATTTGTTGCTCAAAGTTGGGAAGTTAGCGTCATTCTCCAAGGCTAATATGATTTTGCCACAAATTAAGCCAACAACAGCTTCAACATTAAACCTAAAAGTAACTGTTGGATCATCAGTCctaacacaaacaataaaaacttcGACCAGTAAACCAGTAGAAAAACCCATATTAGACTCAAATTCGATCCTCACTTCACTGGCAAATGCTTTGAAAGATGACCTAGATAGTTTGGTAACGACACAAAGTAATATGAACTCTATAGGCCAGAAGAATTCAATTTTGAGTTTCAATGTGAACTCTTTGCCTAAAGATTTTCTCTCTGGGGCTATTTTGAGGAAATTGGATGAAAAAGATGATGAGTATGAGAAAGAGGATGAGACGAATGAAGATCATCCAATGGAGATTGATGAAGATTGCTTGTCTGTGGTACCTGTGACGTCAGCCGGTGGGAACATGGTGCTACAAGTTGAAGGACTTCAGTCTAAATCTGACTCTACACCAGAAGTAAGCGAGTACCTGAACTTGCCTTCATTGGATGGCGGTGATGACGTCACCGACGCACAGAAGTATATCCTCGGCAAGCTGGAGATACTCAACGAGGGTGAtgaagaagatgatgatgacgacgaTGATGATGAAGGCCACACAATAGTAGTAGACAGTGAAAATGGGTCCATACTCCGCATGGTGACCGGACAGAAGTTTATCTACGAGGGCGGAGAGATATCCCTGGTGATGCCTGATGAAGATGATCAGCAAGACGGTGATCAACAGGATAACGGTGATAGTCAAGatTCTAATGACGAATCACAGATCGAGTTGCAAGTGTCGGGTGACGAAGAAACTGCGAACGCTATTATTGCAGCTGCACAAGAACAAGGTGGTGCCTTCATAAAAGTAGAATCAGGCGAGATGTTCCGCGTGAAGTCAGTGTCCAGCGCGAGCGCCGACAGAACGGACGCGCCGCTGCAGATCGTCGCGCACGACGGGGACTTGTTCAAGTGTTTACTGTGTGAGAAGAATGaTGAAAACACACCACTCCAAGATGCAGATACAATGATGCACCATTTGAAATCGCAGCACGATGCGAGGATATACTTGTGTCGCTTCTGTGGAGCCGTTATGAGGAAACGTACGGAATATGCCGCGCATATAGCATCTCACGCGAGCGACTCGTCGCCGCCCGCCCGGCCCGCCGCGCACCGCTGCGCGACATGCGGCAAGGCGTACAGCTCGCGCACGTTGCTGGCCGAACACGCCAACGTGCACTCGGGGGCGCGGCCCTACGCCTGCGCCCTCTGCGGGAAGGCCTTCGCCTCCAAGTACACGCACCAGGCGCATCTCAAGACGCACGCGGTGCGCCCGCGTCCCTTCAAATGCACTCAATGCGGCAAGTCGTTCCTCACGCAACAGAATCTAAACCAGCATGAGAAAACACATTCGGGGGTCAAAGATTTTGTCTGTAATATCTGCAacAAAGCCTTCAGCACACAACACAACTTGGAAGTTCACGGCGTCGTGCACTCCGGGAACAAGGCGTTTGTGTGTAGCGTGTGCGGGAAGGCATTCGCGCGGAGAGCTGAACTTAGAGACCATATGAGGATACATACTGGAGAGCGTCCTTTTTCCTGTGACATCTGCGGCGCTCGCTTTACACAGCGGTCCAACTTACACTCCCATCGTAGAGCGACGCACTTCGACGATAAGCGGTATCATTGTGAACTTTGTCCCAAGAGGTTTAAGAGGAGGAGATTATTAGAATACCACATAAAGGCATCTCACACTGGCGAGCGTCCCCTCAAGTGCGGCATCTGTCATCTGTCGTTCGTGTACCCCGAACATTACAAGAAGCACGTGCGCATACACAGCGGGGAGAGGCCTTACACTTGTGAGATCTGCGGCAAGTCTTTCAACTCGCGCGATAATCGTAACACGCATCGCTTCGTGCACAGCGACAAGAAGCCGTACGAGTGCGTCGCGTGCGGCGCGGGATACATGCGCAAACAACTGCTGTACGCGCATATGAACACCAGCGGACATTTAAATGGATCAATAGTCGTCAATCAACCAAGAGTTATCAAAGTTACTGAAGGCACGAATCAACCAACAGAAATCACTAACATAGAAGCGAAAAATACTAAATTTGATGCGatatttgaaGCCAATGAATTGGAGGCGAGCGTCAAATCTGTTGTAAAAGCTGAAACGGAAGTCAAACTCGAAGACGCCAAGTTCTACATAACTGAAGATAAGAAGTTGATATTACAAGAAAGTGataaAACAACATTGAATCTTATACAAGACGGCGATGAGCCTACGTTACTAACTATACATAATATAGGAGAGAGAGCTGAGGGTACTATCCTAGAAGCGGTAGATGCTGATCAACTTGGAGAACAGACTGAGATCGTGGCGAATGATGAAAATGGCGGTATGGTACGTCTTATACAAATCAAATTGCCGGACGGAAACAACGGATGGGTCGCTATTAACCGATGA
Protein Sequence
MNQTCFICNNRAGLSLRNASSLFGEQNTLQSGKKVSEVVGEIIGKPVVENKVHTSILCKKCFKTCSEYDSIQVRLKTIKTDLLEQFKQSLPSHNLDYDNYEKNVSSPPKPKPLLGKKLVLPASKLQPIPPDLLLKVGKLASFSKANMILPQIKPTTASTLNLKVTVGSSVLTQTIKTSTSKPVEKPILDSNSILTSLANALKDDLDSLVTTQSNMNSIGQKNSILSFNVNSLPKDFLSGAILRKLDEKDDEYEKEDETNEDHPMEIDEDCLSVVPVTSAGGNMVLQVEGLQSKSDSTPEVSEYLNLPSLDGGDDVTDAQKYILGKLEILNEGDEEDDDDDDDDEGHTIVVDSENGSILRMVTGQKFIYEGGEISLVMPDEDDQQDGDQQDNGDSQDSNDESQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFRVKSVSSASADRTDAPLQIVAHDGDLFKCLLCEKNDENTPLQDADTMMHHLKSQHDARIYLCRFCGAVMRKRTEYAAHIASHASDSSPPARPAAHRCATCGKAYSSRTLLAEHANVHSGARPYACALCGKAFASKYTHQAHLKTHAVRPRPFKCTQCGKSFLTQQNLNQHEKTHSGVKDFVCNICNKAFSTQHNLEVHGVVHSGNKAFVCSVCGKAFARRAELRDHMRIHTGERPFSCDICGARFTQRSNLHSHRRATHFDDKRYHCELCPKRFKRRRLLEYHIKASHTGERPLKCGICHLSFVYPEHYKKHVRIHSGERPYTCEICGKSFNSRDNRNTHRFVHSDKKPYECVACGAGYMRKQLLYAHMNTSGHLNGSIVVNQPRVIKVTEGTNQPTEITNIEAKNTKFDAIFEANELEASVKSVVKAETEVKLEDAKFYITEDKKLILQESDKTTLNLIQDGDEPTLLTIHNIGERAEGTILEAVDADQLGEQTEIVANDENGGMVRLIQIKLPDGNNGWVAINR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00726717;
90% Identity
iTF_00301435;
80% Identity
-