Basic Information

Insect: Ochropleura leucogaster
Gene Symbol: -
Assembly: GCA_958449745.1
Location: OY288207.1:13534142-13540871[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.021 1.7 10.0 4.1 1 23 234 257 234 257 0.97

2 12 0.0073 0.58 11.4 3.3 1 23 264 286 264 286 0.95

3 12 0.00042 0.034 15.3 1.1 2 23 293 314 292 314 0.97

4 12 4.7e-07 3.7e-05 24.6 0.2 1 23 320 342 320 342 0.98

5 12 2.8e-06 0.00023 22.2 0.8 1 23 351 373 351 373 0.96

6 12 1.6e-05 0.0013 19.8 1.5 2 23 380 401 379 401 0.96

7 12 0.00069 0.056 14.6 7.5 1 23 407 429 407 429 0.98

8 12 2.1e-09 1.7e-07 32.0 0.6 1 23 435 457 435 457 0.99

9 12 1.5e-05 0.0012 19.9 1.0 1 23 463 485 463 485 0.98

10 12 7.5e-07 6e-05 24.0 1.0 1 23 491 512 491 512 0.98

11 12 8.5e-05 0.0068 17.5 1.9 1 23 518 540 518 540 0.99

12 12 0.0035 0.28 12.4 2.8 1 23 546 568 546 568 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.021	1.7	10.0	4.1	1	23	234	257	234	257	0.97
2	12	0.0073	0.58	11.4	3.3	1	23	264	286	264	286	0.95
3	12	0.00042	0.034	15.3	1.1	2	23	293	314	292	314	0.97
4	12	4.7e-07	3.7e-05	24.6	0.2	1	23	320	342	320	342	0.98
5	12	2.8e-06	0.00023	22.2	0.8	1	23	351	373	351	373	0.96
6	12	1.6e-05	0.0013	19.8	1.5	2	23	380	401	379	401	0.96
7	12	0.00069	0.056	14.6	7.5	1	23	407	429	407	429	0.98
8	12	2.1e-09	1.7e-07	32.0	0.6	1	23	435	457	435	457	0.99
9	12	1.5e-05	0.0012	19.9	1.0	1	23	463	485	463	485	0.98
10	12	7.5e-07	6e-05	24.0	1.0	1	23	491	512	491	512	0.98
11	12	8.5e-05	0.0068	17.5	1.9	1	23	518	540	518	540	0.99
12	12	0.0035	0.28	12.4	2.8	1	23	546	568	546	568	0.97

Sequence Information

Coding Sequence: ATGGGTTCGGATACCATTCAAGATGGCAAAACAATAGGTGAAGAAGAGAAAGTAACCGGAGAAGACTACATTCAAATAGAAATACCTTACAATCTGTTCGAATACCTAAGTTCAGACCACTGCAATGTTCAGAATATGTGTCGAATATGTCTCGCGACAGAAAACGAGGTTCTGTACCCACTAGTTGCTACCAAAGAAAACAGTGTTTTAGCTCATATGTTTACTGCATTTACTACTGTTCAGCTTCTTCCAGGAGATGGTTTGCCATCAAGCATATGTGAACCATGTCAGGCTCAAGTAGTGCAGAGCTATGAGTTCAAGACCAAGTGTGAGAAGTCCGACTGCATGCTCAAGTCATTACTAAAAGGAGAATTTCTTACCAAAGAGGAAAATATACCTGATCATAGCATAGAAGTAAAGCAAGAAGAAATGACAGAAGAAAATTTGAATGGTagaaataatagaaatatttatttaaatgacattattGATGTTAAACAAGAAGCAGAACTGCTGGAAGATGTGCAATATTTAGAAGATCTCAGTGATAACAGTGATAGTGGTAACCTTTGTATAGTACAACAAAAAACAAGGCAAAAGACAAAAAAAAAGTTAAATGAATGTGATGATGAATCCAGCAGTTTTCTAAAAGTGTCTAACAAGAAACTTAGAAGAAAACCTggtaataaagaaaattcttttacttgCAGGGTTTGTTCTAAGAAATTCCAAAATCTGAAAGCATTCCATGCACATGTGAAGAGCAAGCATCCTAGCACCAGACATCTACACTTTTGTAACCAGTGTACTGAGATTTTTAACTCTGAGCATGATCTCAAAGTACATACATCTATACACATGAAAGGAAACACTTGGAAGTGCAATCAATGTCCTAAGGAATTTATTGcGTGTGCGATGCTCCGTCGACACATTTCGAGACACATGGAATCTAAGCGCTTCTCGTGTGAGGTGTGTGGCAAGGCGTTTACTGAACAGTACGCACTGAGGAGACACGCTCGCGTCCACACCGGCGAGATCCTTGAGAAGAAACATGCATGCACCATATGTGATAAGAGGTACAGTGATAGTGGTCTTCTCACAGCACACATGTCTCGCCACATAGGCCTGCGTCCTTGCGAGTGCAGTATTTGCGGCAAACGGTTTCCATCGAACCGTCTGCTGACGTCACACCGACTCGTCCACTCGGATCGTAAGCCGTACGCCTGCCAGTACTGCGATAAACGttTTCGCCACGAGTCGACGCGCAACACCCACCATCGTACACACACCGGCGAGAAACCTTACGTGTGCTCCGTCTGCGGCAAGAGCTTCATACAAAACTCCAACCTCACGCTGCATATGAGGACACATACTGGCGAGCGCCCCTACTCATGCTCAGTCTGTGATCGCAAGTTCACTTCAGGCTCGACTCTCAAGAGCCACGAACGGGTGCATTCCGGAGAACGACCTTTCAGCTGTGAGATTTGTGGGAAAAGTTTCACGCGCAAGAACTTGAGCGCGCACATGCGCAACCACACGGGCGAGCGTCCCTACGAGTGCAGCGTTTGTTCCAAGAAGTTTGCTAACGCGACGCGCCTCCGAGATCATCACCGCGTACATACagGTGAAAAACCATTCGACTGCTCAATGTGCTCGCAAAAATTCGCCACAAAATCCCAACAGCTAAAACACTCCAAAACTCACCAAAAAAAGAAGAGAACACAGCAGCACGCTTCAGATAAAGACAGAGAGATTAAGAGAGAGCGAGAAAGCCGTGGACTAGTCATATTACAACATGTTGAGCCTATACCTGTCATCACTGACAGAATTATGTTCAACAAGGAACATGGAGAACTAATAACAGTCAATGAAAATGTACTTGCAGACGAGTCACCGGAAGATCAAACCAAAGAAATTACCCTGAACATAGTACAGAAAGTCCCATTAGAAGTATCAGGAGAGTTAGTACTACAGGATGATACAAACATGAAAGAACTTTTAGTAGTTGATAATAGCCAAACTGACTACCAAGGTGACACTATATGCTTGAATACTGGGAACGTGAATATCATCGATGACGTGAGATACGAGGGAGAGAACTTAGTGACGGTAAATGAGGGCGGGGTCAGCATCTCGACCGCGCACTTAGAAGGAGCCACAGTGAAACTGTACCAGTTAGACCAAAGTTTATTACAAATACACAGCTCCGGTGGACAAGTCACTATTAGTAAGATAACTAGCAAAATGACTGctaacttttaa
Protein Sequence: MGSDTIQDGKTIGEEEKVTGEDYIQIEIPYNLFEYLSSDHCNVQNMCRICLATENEVLYPLVATKENSVLAHMFTAFTTVQLLPGDGLPSSICEPCQAQVVQSYEFKTKCEKSDCMLKSLLKGEFLTKEENIPDHSIEVKQEEMTEENLNGRNNRNIYLNDIIDVKQEAELLEDVQYLEDLSDNSDSGNLCIVQQKTRQKTKKKLNECDDESSSFLKVSNKKLRRKPGNKENSFTCRVCSKKFQNLKAFHAHVKSKHPSTRHLHFCNQCTEIFNSEHDLKVHTSIHMKGNTWKCNQCPKEFIACAMLRRHISRHMESKRFSCEVCGKAFTEQYALRRHARVHTGEILEKKHACTICDKRYSDSGLLTAHMSRHIGLRPCECSICGKRFPSNRLLTSHRLVHSDRKPYACQYCDKRFRHESTRNTHHRTHTGEKPYVCSVCGKSFIQNSNLTLHMRTHTGERPYSCSVCDRKFTSGSTLKSHERVHSGERPFSCEICGKSFTRKNLSAHMRNHTGERPYECSVCSKKFANATRLRDHHRVHTGEKPFDCSMCSQKFATKSQQLKHSKTHQKKKRTQQHASDKDREIKRERESRGLVILQHVEPIPVITDRIMFNKEHGELITVNENVLADESPEDQTKEITLNIVQKVPLEVSGELVLQDDTNMKELLVVDNSQTDYQGDTICLNTGNVNIIDDVRYEGENLVTVNEGGVSISTAHLEGATVKLYQLDQSLLQIHSSGGQVTISKITSKMTANF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00043775;
90% Identity: iTF_01085631;
80% Identity: -