Basic Information

Insect: Ochropleura leucogaster
Gene Symbol: -
Assembly: GCA_958449745.1
Location: OY288210.1:12989205-13002206[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.9e-05 0.0071 17.4 2.2 1 23 427 449 427 449 0.97

2 20 0.0046 0.37 12.0 0.6 1 20 455 474 455 477 0.94

3 20 2.3e-05 0.0019 19.3 5.6 1 23 496 518 496 518 0.98

4 20 0.00011 0.0087 17.2 4.1 1 23 524 546 524 546 0.99

5 20 4.1e-05 0.0033 18.5 5.3 1 23 552 574 552 574 0.97

6 20 9.4e-06 0.00075 20.5 7.4 1 23 580 602 580 602 0.97

7 20 7.9e-07 6.4e-05 23.9 2.9 1 23 608 630 608 630 0.97

8 20 0.00011 0.009 17.1 6.7 1 23 636 658 636 658 0.97

9 20 0.00011 0.009 17.1 6.0 1 23 664 686 664 686 0.97

10 20 5.4e-07 4.3e-05 24.4 1.9 1 23 692 714 692 714 0.98

11 20 1.1e-05 0.00086 20.3 7.7 1 23 720 742 720 742 0.98

12 20 2.8e-05 0.0022 19.0 6.6 1 23 748 770 748 770 0.98

13 20 2.2e-06 0.00018 22.5 4.2 1 23 776 798 776 798 0.98

14 20 7.4e-06 0.00059 20.8 5.0 1 23 804 826 804 826 0.96

15 20 1.2e-05 0.00097 20.2 5.2 1 23 832 854 832 854 0.98

16 20 3.4e-06 0.00027 21.9 6.0 1 23 860 882 860 882 0.98

17 20 6.6e-05 0.0053 17.9 7.9 1 23 888 910 888 910 0.97

18 20 2.7e-05 0.0022 19.1 7.7 1 23 916 938 916 938 0.98

19 20 0.00081 0.065 14.4 0.3 1 23 945 967 945 967 0.96

20 20 0.35 28 6.1 4.9 1 23 978 1000 978 1000 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.9e-05	0.0071	17.4	2.2	1	23	427	449	427	449	0.97
2	20	0.0046	0.37	12.0	0.6	1	20	455	474	455	477	0.94
3	20	2.3e-05	0.0019	19.3	5.6	1	23	496	518	496	518	0.98
4	20	0.00011	0.0087	17.2	4.1	1	23	524	546	524	546	0.99
5	20	4.1e-05	0.0033	18.5	5.3	1	23	552	574	552	574	0.97
6	20	9.4e-06	0.00075	20.5	7.4	1	23	580	602	580	602	0.97
7	20	7.9e-07	6.4e-05	23.9	2.9	1	23	608	630	608	630	0.97
8	20	0.00011	0.009	17.1	6.7	1	23	636	658	636	658	0.97
9	20	0.00011	0.009	17.1	6.0	1	23	664	686	664	686	0.97
10	20	5.4e-07	4.3e-05	24.4	1.9	1	23	692	714	692	714	0.98
11	20	1.1e-05	0.00086	20.3	7.7	1	23	720	742	720	742	0.98
12	20	2.8e-05	0.0022	19.0	6.6	1	23	748	770	748	770	0.98
13	20	2.2e-06	0.00018	22.5	4.2	1	23	776	798	776	798	0.98
14	20	7.4e-06	0.00059	20.8	5.0	1	23	804	826	804	826	0.96
15	20	1.2e-05	0.00097	20.2	5.2	1	23	832	854	832	854	0.98
16	20	3.4e-06	0.00027	21.9	6.0	1	23	860	882	860	882	0.98
17	20	6.6e-05	0.0053	17.9	7.9	1	23	888	910	888	910	0.97
18	20	2.7e-05	0.0022	19.1	7.7	1	23	916	938	916	938	0.98
19	20	0.00081	0.065	14.4	0.3	1	23	945	967	945	967	0.96
20	20	0.35	28	6.1	4.9	1	23	978	1000	978	1000	0.99

Sequence Information

Coding Sequence: ATGAATCAGGATCATCACAATATGAATACGGGTGGTGGTCAGCCCCCGGGAAGTTCTGAGTCACAGGGCCAAAGAGTTCAGGTCACCCAGCAGCAACAGCAGAATAACTTGCCTGCCACGACATCTGCTACAGATTTGCGAGTGAACTCAGCAGCAGTGAACGTTGCTTTGTCTAGTGTCGCGAAATATTGGGTGTTTACAAATTTATTCCCCGGTCCGATTCCGCAAGTGTCTGTGTACGGATTGCCTGCTGGTGCCAGGATAGAAAATGGGAAACCTGTTCAGGATCTTGGTCAAGCTCATGCAAGTATACTGAATGGGGATCCAAATATTATACTTGGGCATCATGCAGGCCAGTCCCAAGTCACTGTGTCTGCTGCTGGTGGTCAGCAGATACCAGTATCACAGATCATTGCCACACAATCTGGACAAACTCATGAAGCTCTTGTGGCCCATAGTCAGCAGCAAGCTGAGCTGGTGGCGGCCCAGAACGCCGGCAACAACGCCCAGGTGTCAGTTAGTGCAGGCCAGGCCACTCACCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGATATGGGACACCATTCGCAACAACACTTAATGCAGCAACAATTGATGGCACAGGCACGACCAGATCACAACAACCAACAGATTCAACTGACGGTAAGCGAAGATGGCATAGTGACTGTGGTGGAACCCGCCGGCACGAAGATGGTCGACAAAGAAGAACTACACGACGCCATCAAGATGCCCAATGATCACACCCTGACTGTGCACCAGCTGCAACAGATAGTGGGACAACAGGTGATAGACAGCGTAGTTCGCATAGAACAAGCGACCGGTGAGCCGGCGAACATTCTAGTGACCCACAACCCTGACGGTACTACCTCTATTGAAGCCAGTGCTGCCGACCCTCTGATTGTCAAGGACGAGAAGAGTGCTAACAAAATAGAAACTGCACAGTTTGCTATACCTGCTGAGATAAAGGATATAAAGGGGATTGACTTAAAGaGTGTAGGAGCTATGGGCATGGAAGGTGCAGTAGTGAAGATCTCAGCCGGCGCGTCGGAGCACGACATTCACGCTATGTATAAAGTCAATGTAGAAGACCTATCTCAACTGCTTGCTTACCATGAAGTGTTTGGGAAACTTAATTCGGAAGGCCAACCGCAACAAGCAAAGgtaatAAGCGAGGTAGAAGTAGAAGTGGAAGCCGGCACCAGCGCAGCCATGTCAGAAGCGGAATCATCCCCTGGTCACCACTCATGTGATATTTGCGGGAAAATATTCCAATTCCGATACCAACTAATTGTTCATAGGCGTTATCACGGCGAAAGTAAACCGTTCACGTGTCAAGTTTGCGGTTCCGCATTCGCAAATCCTGTCGAATTGTCCAGACATGGGAAATGCCATCTTgccGGAGATCCGAACGAGAGACACGCCAAGCGAATGGCCCAGGACAAGCCATACGCATGCACAACTTGCCACAAAACATTCTCCCGTAAAGAACATTTGGACAACCACGTTCGAAGTCATACTGGAGAAACTCCCTACAGATGTGAATTCTGCGCGAAGACTTTCACCCGCAAAGAGCACATGGTCAATCACGTACGAAAACATACGGGCGAGACTCCACACCGATGTGACATTTGCAAAAAGAGCTTCACAAGAAAAGAGCACTTCATGAACCATGTTATGTGGCACACAGGTGAGACGCCGCACCATTGTACAATATGCGGCAAGAAGTATACTAGGAAGGAGCACTTAGTGAACCATATGCGATCTCACACGAACGATACTCCGTTCCGATGTGAACTGTGCGGCAAGTCGTTCACGAGAAAAGAACACTTCACCAATCACATTCTGTGGCATACGGGAGAGACCCCGCACCGCTGCGACTTCTGCTCAAAGACGTTCACTCGTAAGGAGCATCTTTTGAATCACGTCCGTCAGCACACGGGCGAGTCACCTCACCGCTGCGACTTCTGCAGCAAATCATTCACCCGTCGAGAACATCTCGTCAACCACGTGCGACAGCATACTGGGGAGACGCCCTTCCAGTGCGGATACTGCCCTAAAGCGTTCACAAGGAAGGATCACCTTGTGAACCACGTCCGCCAGCACACTGGCGAGTCCCCACACAAGTGCTCGTACTGCACAAAGTCCTTCACGCGTAAGGAGCACCTCACGAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACCGCTGTACTTACTGCGCCAAGTCCTTCACGAGGAAGGAACATCTCACCAACCACGTCAGACAGCACACGGGAGAAACGCCACACAAGTGTACGTACTGCCCGCGGGCCTTCGCGCGCAAGGAGCATCTCAACAACCACATCCGCCAGCACACCGGCGTCATGCCGCACGCCTGCTCCTACTGCAGCAAGAGCTTCACCAGGAAGGAACATCTCGTTAACCATATTCGGCAACACACGGGCGAGACTCCGTTCAAGTGTACGTTTTGTTCAAAGTCGTTCTCTCGTAAGGAACACCTTACGAACCACGTGAACCTTCACACAGGAGAAACGCCCCACAAATGTCCCTTCTGCACAAAAACATTTTCCAGGAAGGAACACTTGACCAATCATGTCAGAATTCACACTGGCGAATCTCCCCACCGCTGCGACTTCTGCCAAAAGACGTTCACACGTAAAGAGCACTTGACGAATCACTTGAAGCAACATACCGGCGACACCGCGCATGTCTGTAAGGTGTGCTCCAAACACTTCACCAGGAAAGAACACCTTGTCACGCACATGAGGTCGCACAGTTGTGGCGAGCGTCCATTCAGTTGTGGCGAGTGCGGCAAGTCTTTCCCCTTGAAAGGCAACTTACTGTTCCATGAACGATCGCACAACAAGAACAATGCCAATGCCAATAAGCAGTACCGATGTGAAGTCTGCTCCAAGGAATTCCTCTGTAAAGGCCATTTGGTGTCTCATCGGCGCACACACGCCGAATGGTCGGAAGGCGCCGCGACCGGAGAAGCACCCGCTGAAACAGAAGACTGTACTGATAATAAGTGTATCAAAGTAGAGCCAGAAAGAACTGAAAGGAAACATGAAGTCAGgacaACAGTCGAAACGAGACCAGCCGAGCAGAATAATGTTGCACAAAGTCAACCCAACACACCAACTGTGATGATAACGAATAATCAACAAGTGCGTGCGGCGACCGTGAGCACAGTGGGCGCGGGCGCCGCCACGTTCGTGTCGCACCACGCGGGCGCCGCGCTCGCGCACCACCCCGTCACCGTCAACTACTAG
Protein Sequence: MNQDHHNMNTGGGQPPGSSESQGQRVQVTQQQQQNNLPATTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPAGARIENGKPVQDLGQAHASILNGDPNIILGHHAGQSQVTVSAAGGQQIPVSQIIATQSGQTHEALVAHSQQQAELVAAQNAGNNAQVSVSAGQATHQQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMAQARPDHNNQQIQLTVSEDGIVTVVEPAGTKMVDKEELHDAIKMPNDHTLTVHQLQQIVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKSANKIETAQFAIPAEIKDIKGIDLKSVGAMGMEGAVVKISAGASEHDIHAMYKVNVEDLSQLLAYHEVFGKLNSEGQPQQAKVISEVEVEVEAGTSAAMSEAESSPGHHSCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANPVELSRHGKCHLAGDPNERHAKRMAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCDFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSYCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLTNHVRQHTGETPHKCTYCPRAFARKEHLNNHIRQHTGVMPHACSYCSKSFTRKEHLVNHIRQHTGETPFKCTFCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCDFCQKTFTRKEHLTNHLKQHTGDTAHVCKVCSKHFTRKEHLVTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNNANANKQYRCEVCSKEFLCKGHLVSHRRTHAEWSEGAATGEAPAETEDCTDNKCIKVEPERTERKHEVRTTVETRPAEQNNVAQSQPNTPTVMITNNQQVRAATVSTVGAGAATFVSHHAGAALAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_01030446;
80% Identity: -