Oleu014113.1
Basic Information
- Insect
- Ochropleura leucogaster
- Gene Symbol
- clz9
- Assembly
- GCA_958449745.1
- Location
- OY288214.1:6597809-6599635[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-08 1.9e-05 25.0 0.0 11 37 21 48 15 51 0.87
Sequence Information
- Coding Sequence
- ATGTCTTCaagattaaatagaaaaacatgGGATAGCAAATCCATGAAAATTGCCTATCTTGctgttaaaaacaaagaaatgggATATCTTAAGGCTTCGAAATTATATGGTGTTCCCAAAAGCACTTTAGAAGACTATGTTAAGAGTCCCAAGGACATAGATGAGCTCCTGGCAACTAAATTAGGcagaaaacctacatttaacAAGGAAATAGAAGAAGAATTAGTTGAATACTGCCTTGAGatggtaaaaaaatactatgggCTTCGGGCAAATGATATAAAACACATTGCATTTGAACTCgctgtaaaaaataacattccgCATCAGTTCTCCCACAAGGGTCAGGCTGGAAAAAAGTGGCTTGCTAGTTTTTTGAAGAGGCACCCACAACTCGCTTTTAGAACACCTGAAGCTACCACAGCTTTGAGAGCAAGGGGTTTTACTATGGAGAAGGTGACACACTTCTTCGATGAAATATTGGGTCCTGAgatggaaaaaataaattatgatccCATGCGTATTTTTAATGTGGATGAGACGGGAGTCactgttgttcaaaagaaaatggcaaaagtaatttttttgaaaGGACAAAAGCAAGTTGGTGGAATCACTTCTGCAGAGAGAGGGGCTCTTGTGACTTTAGTATTTTGTATGGGAGCTTCCGGCTTATTTGTACCTCCATTGTTTATTTTCCCTAGAGTAAATATGAAGAGAGATTTGGAAGATGGAGCACCACCTGGTTCGAAGTTCGATGTGCATAAATCGGGGTGGATTCAGCTACACATCTTCACAAAATGGTTTCAACATTTTATTGATTGTGTTAAACCCTGCAAAGAAAAACCGGTTATTCTTTTGTTAGATGGACATTATTCGCATACAAGAAACATCGATGTGATAGACCTAGCTAGAGAAAATGGTGTTATCCTCATTTCAATTCCGCCACATACCTCACACAGGTTACAGCCGCTAGATGTAGGATTCATGGGACCATTTAAGAAGTTCTACCATCAAGAAATAGAATCGTGGTTAAGATCTCATCCAGGACGGGTAGTAACAGCATACCAAGTATCAGAGTTAGTCGGCAAAGCATTTCTGCGTGCTCAATCAGCTGAGATAGCTGTTAATTCATTCAGAAAGTGTGGAATTATTCCgttcaataaaaatgtcttcAGAGACGAGGATTTCGCCGTCGAGGACTCTCCGGGTGATATCAGCAACGCTTCTGAAGCTACGATTAATGATTTTCCAGTTTGTAGCCGACCATCGACTCCACAACCGAGCACATCTGGATTGCAAAAGTCCACCGGGTCAATTACGCCTTTACTTTTCAAAGAACCTGCGAAAACGATGTCAAAGTTGATTGTGTCACCACAGATAATTAGCCCTATTCCTGCTATTCAAAGAAAACCTAGGATAAACAGCAGAGAGACCAAGCCTACAGTTTTATCAAGCTCGCCATATAAAACAACACTGGAAGCacaaatagaaaaaagagatgaacctcttacaaaaaaaagaacagcgCCAGCTAAAGAGACCAAGGGGAAAAAGaagacgaaaaaaaagaaagttttaaaagtaaacaagaAAGATGTTTCTGATTCAGAAGATTcagaaataaatatgattttagaaAGTGATGGCAGCGAAGCTAACGATGATGATGCCGAATGCACTTATTGCAATATGGCCTTTTCTACTGACAGTCGAGGGGAACGATGGATAAGATGCCTTGCATGTCGTCGCTGGTGTCACGAAGAATGCGCTGGAGTAGAAGATCATAGTGTTGTGGACTTTGTCTGTGATTTATGCCTagcttag
- Protein Sequence
- MSSRLNRKTWDSKSMKIAYLAVKNKEMGYLKASKLYGVPKSTLEDYVKSPKDIDELLATKLGRKPTFNKEIEEELVEYCLEMVKKYYGLRANDIKHIAFELAVKNNIPHQFSHKGQAGKKWLASFLKRHPQLAFRTPEATTALRARGFTMEKVTHFFDEILGPEMEKINYDPMRIFNVDETGVTVVQKKMAKVIFLKGQKQVGGITSAERGALVTLVFCMGASGLFVPPLFIFPRVNMKRDLEDGAPPGSKFDVHKSGWIQLHIFTKWFQHFIDCVKPCKEKPVILLLDGHYSHTRNIDVIDLARENGVILISIPPHTSHRLQPLDVGFMGPFKKFYHQEIESWLRSHPGRVVTAYQVSELVGKAFLRAQSAEIAVNSFRKCGIIPFNKNVFRDEDFAVEDSPGDISNASEATINDFPVCSRPSTPQPSTSGLQKSTGSITPLLFKEPAKTMSKLIVSPQIISPIPAIQRKPRINSRETKPTVLSSSPYKTTLEAQIEKRDEPLTKKRTAPAKETKGKKKTKKKKVLKVNKKDVSDSEDSEINMILESDGSEANDDDAECTYCNMAFSTDSRGERWIRCLACRRWCHEECAGVEDHSVVDFVCDLCLA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01084193;
- 90% Identity
- iTF_01084193;
- 80% Identity
- -