Oleu009987.1
Basic Information
- Insect
- Ochropleura leucogaster
- Gene Symbol
- -
- Assembly
- GCA_958449745.1
- Location
- OY288209.1:16129807-16132169[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.2e-11 7.9e-08 32.6 0.1 1 41 12 52 12 56 0.93 2 2 1.7e-09 1.5e-06 28.5 0.0 1 39 72 110 72 114 0.91
Sequence Information
- Coding Sequence
- ATGGGTTCGAAACATCGAAAACGAGCTCTGTGGACGGAAGAAAACTTGAGGGCTGCTATGGAAGCTATTAGaagtgaaaaaataacaaaagcagCAGCAGCCAAACGTTACGGAATTCCTTTTCAGACTATCAGCGATCATTTAAGAACGGGAAGTTTAGTGAAGCGATTGGGACGAGATTCGGATAACCTACCTCCAAGAAGAGTGGCATGGACGGAAGAAGATATGCACGGGGCAATGGCAGCAGTAATTCAGCATAACATGACTCAGAGCGCTGCAGCAGAACTATTCGGCATTCCCAGGCCAACATTAGCTGATCACTTGTCCAAAAGAAACATCGGGAATCGAGTGGGGCGCCATTCTATAATGAATGAAGCTCATGAAAAGTTCCTTGTCAGCAGACTAATAGAACTAGCTAATAGTGGAAAGCCAGTCACTCCACACGTCATCTGCAAGCAAGCGTTCCTATTTTGCGAAGAGTTTAAAttgaaacataattttaataacgaGACTAGGATCGCGGGGAAGAAATGGTTTAAAAGGTTCTTGAAACGACACCCCGAGGTTTCGCATTGCTTCTCTTGA
- Protein Sequence
- MGSKHRKRALWTEENLRAAMEAIRSEKITKAAAAKRYGIPFQTISDHLRTGSLVKRLGRDSDNLPPRRVAWTEEDMHGAMAAVIQHNMTQSAAAELFGIPRPTLADHLSKRNIGNRVGRHSIMNEAHEKFLVSRLIELANSGKPVTPHVICKQAFLFCEEFKLKHNFNNETRIAGKKWFKRFLKRHPEVSHCFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -