Basic Information

Gene Symbol
Kdm4B
Assembly
GCA_958449745.1
Location
OY288200.1:14019588-14035173[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-19 1.1e-15 58.5 0.0 9 89 892 969 885 969 0.90

Sequence Information

Coding Sequence
ATGCTGCGCATTACTGAGCAGTGCTTACATAAAGTTTCGTCCGGCAATGCTAAGCAAAGCGTTACCAAGAAGCAAACCACTCATAAGGTGAACAATCCTGAACACAGTTCTCCTGAGAAAACAccaaagagaaaaagaaaaatgagcTCACCCGACAAAAGTTCAAAGAAAACACAAGCCAAGAAacgcaaaacaaaagaaaagaaaatattaaccaAACATGTCACTCCAGAACCGAAGAAGAGAGACGCCGAGCCAACGCCTGCTATACCTGAGCTAAAAGTCACTGTCGAAATCAAATCAGAAAATGAACCCTCAAATGATGTTGCTACAGCCGTGACCCGGGCGAAACCAGAGGACAGGCTTGTGGATGACCCACTCGACACAGATGTCGTGATTGTTGTAGATGACACCCAGGGTGCGCGCGCTTTAGATGAGCTCGCCATGGATGACACGGCCGCCGAAGAGGGCGCCATCGCCACAGATGCCATGCTCGCCACAGTAGACGAGCTTGTAGATAGCATGCTCGACACAGAGTACACGGACGTCTCAAAGGGCGCGTACGCATTAGATGGTATACTCGCCACAGAGGACGAGCTCGCTGTAGATAAATCTGCCGCCGAAAAGACTGCGCTCGGTATGCTTGAGTTACATGACACAGAGAGCGCTCGCGCAGTGGTAGGAATGCTCGAGTCAGAGAATGAGCTCTGCATTAATGAAACTGTTGCCAATGATGGCCCGCTCGCCCTTGGTGGCATGCTGGCCACGAAGAGCCCTCTTGATGTTGTTGCCAACGTTGCCAAAGATGGCGCGCTCGCCGCTGATGTCATTGTAGTCACAGAAAGCCCGCTTCAAATTAATGACAGCTTCACCAAAGAGAGCGCGCTCACTATTGAAGGCATGCCCAAAATAGGGGTCGACCTCGCCACAGATGTCACACTTGTCCCGGGTGCTTCAGGCGCCACGGATGAGCCAGTAATCCCGTCCGTACAGGTTATTCCGTCTTTGGAAGAAGATGATGTTGAATCAATAAGGTTACGGTTTGACGACAATTCCGAAGATGAACCAGCAGTGCTGACCAAGTTTGGAGATATGGAGGTGGACCTGGGCGATATATCTGAAACACTTACGGACCCTGATAACCCTTGTGATCCGGTCGTAACTAGTGACATGTCCGGGAAACGTGGTCTTTCTCCAGaaCCTGGACCAAGTGGTATGCAGTACCAATTCAGCGCATGCGATTCAGACAGTGAAGAACAAAAGTACTACAGTGATACGAAAATGTACTTAGGTAATAATATACCTGAAAGGTATCTTAATGAAGTCTTTCTTAATACAGCTCTTAACATTGAGCGTGCACGGAACAGAACGCTTCAAAAGAAGATTTGTGTCGGGACTACGTTGTGCTCGGACCGGGATGTTATAAACGCATCTAAAGAAGTATTGGACTCGCGCTGCAAAGAGTGTAAAGCCTGCATCAGGATTGAGAAACTGATGAAAATTTGGGCATTACTGACATCAAAAATAGAATTAACGAGAAATACTAACGGACAAAATAACAACACCGAGGCCCCAGACAGCGATCTAGTAGAGGGAGAACAAGATGAGATTGAAGTACCTTCAGATTCAACGGACGAAGACCTAAACCAAGATCTTTACTTGGATCTTATGCCGAAACATTCTGGTTTAATGCTGAAAATAGGAACAAACGTCCAACACGGGAGAGAGCTTTTAGCGGTTTGTCTGATACCGAAATGTAACTCTAGGAAAACTGTCTTTTCATTGGAGgagaaagaaaaagttttagaTGGTTTAATTGAGACCCTAACACTTAGTCAAAACGACAATACGAAGGTTACAAATGACAGTACAGAGGTTCGAATCGACAATGCAGAGGGTCGAAATGACGGTACACATTCTCGAAAGGACAGCACAGCGAACAATACTGAGGGTCGCAGAATAAGCCTGTCATCGGATAGCGAATTGAGCGATAGTACCACTACTCCCGAAGAAGAGACAACAAACCGCGTTCagcatcacaaaataaaaactgctaAAAGACGGTTAGCTAAAGCGAAACTGATGCAAGACCGCATCAttaaggaaaaagaaaaagagataGCGGCGTTTGAGTTACAAAAGCGAGCTGAAATAGCACGGATAATGGCTAAAAAGAATATTTGCGAGGTGGAAATAACCCGCTACCAGGAGAGTTTTACTTCGATGCAGAAGGTGAAAGAAAAAGAATTTGTTCGCCTTAAAACGGAGATCAGAAAAAAACCAGAGATACAGAATCGCAGTATGTTCGATGAAGTCGACGGTTTGGCGGAGGAACTTGATTATGAAAAGGATGCCAAGAGCATGGACCAAGAAGACTTGGCAGATGCAGATTTGGATCAGCCTAGCACCAGCGGCCAAGCATCAGCCGAAAGCGGGGTGGTAGTAGATGCGCCTGTGTATTACCCTACTGCAGAAGAATTTGCTGATCCCCTTATATTCTACGAGAAGATCTGGCCGGAAGCAGTTCGATTTGGCATTTGCAAAATAGTGCCACCTCCTGGTTGGCAGCCGCCACCCCATAAAGAGGATGACGAAATGAGATTTGATGTCACGAACCAATATATTTCGCGACTGTTCAGCCGCTGGGGACCTGCCGCAAGAGAACTTTGTGCTATTAAGTTGTGCCTTCAGCAACAAAACATTTCAGTTAATCGATTACCAAATGTGGATAATGTTGAAATTAATTTACCTAAATTATACCACACCGTACAACGGCACGGAGGTCTTGAAACAGTGATCAACCAGAACCGATGGGGCAGAGTAGTAGAAGATTTGAAATTTACTAAAGGAGCCCTTAATGAGAGGAGATTGGACCAAATCTATGTGAAATATCTCCTTCCATATGATACGCTGTCTCATACGGAGCGTCACGAAATAATGGCTAAAGTAGAATTGGCGTGGCAACGAAAATATCAAAAGCTTTTTGACCGCGCGTTAAATCCGCTATACCGCCAGCAGCGCATGCTTGGCGGCTTACCGGATGAATCTGAAGAGGAGGAGACAGAAGATCCAGCCACTGTGAAAGCTCTCTCTGAGTCAGAGGATTGCATTATAAAGGGCGGAACTACGACCCTAGCTAAATTCAAAAAGGTGGCCTCCTTTGCCGAGAGCGCATTCGGACAAGGCTCGGAGGGCGGCCCACCTCCTAAGGTGAAAGATGTCGAGGAAGAGTACTGGCGCCTCGTGACACATAGCTCTGAGCACCTGTGTGTGAACAGCGCCGCCATTGACACAGGCGATGAGGGCTACGGctttactaaaaataacaatGACCCTTACAGCCTCCACCCATGGAATCCCAAGGTGGTCAGCCAGAATCGTCGCAACGTGTTGTCTTACTTAGATGCTATAATTGGCCTAACAGTACCCACCTTACTACTGGGAATGCTATATTCAACATCATGCTGGCACAAGGATCCCCATCAAATAGCCTGGTTAGAATACCAACACATAGGACCACCTAGAGTATGGAATGCGATACCAGAAGCTGAGTCGGAGACCTTCAGGAAGGCCGTAGAAATTCTTTGCCCAACTGCAGCCCAAAACAAAAGCCTGTGGCTGTCGACCGACATCTCAATGATCCCTCCGGACATGCTGCGCAAACACAACGTGACGCTGTCGCGTGTGGAGCAGAGTCCGAGCGAGTACATCATGGTGTTCCCCAACACCTACACGAGCTGCATCAGCACCGGCTACACGGTCGCCGAAAGCGTCTACTTCGCGCCGCCATCCTGGCTCAAAAGGCTATGGAATGTCTTCAAGGAGACCCGTGAAAGTTGCGAACCGACAATGTTCGCAATGGAACATTTGTTGTATAACATCGCAAGAGACGCTACAGACAGAGAAATAATGCAAACCGCGCAGCCACTATTCGAAAGAATGTTGCACGAAGAAGTGACGAACAGGCAGATGCTGCAAGAAAGGGGTGTCACCTTTGTGCAAGATCTATATAGCTCCGACCTACCCACACCGTCTACTTCAAGCGGGAAGAAGAAGGGTAAACAGCAGTACATCCCGCGAGACCAAGAGGAGTGCGAATACTGCCGGGCTACGTTGTACCTCTCTAAGGTAAAGGGGCTGACCAGGCGGAATACTCTATTGTGCTTAGAGCATGCACTAATGATGTTGGACACAGACAAGTTTAGAGATGCCGACATAAACCACGTCCAGGTTCTCGTGCATGTGAGTGTAAAGGAGCTCAACACCGTCAACGATGACATGAAGCGGCGCTTGCGCAGCCCGTTACGCACAGGCTCCAGTCGCGATTCCAGTGCCAACATGTAG
Protein Sequence
MLRITEQCLHKVSSGNAKQSVTKKQTTHKVNNPEHSSPEKTPKRKRKMSSPDKSSKKTQAKKRKTKEKKILTKHVTPEPKKRDAEPTPAIPELKVTVEIKSENEPSNDVATAVTRAKPEDRLVDDPLDTDVVIVVDDTQGARALDELAMDDTAAEEGAIATDAMLATVDELVDSMLDTEYTDVSKGAYALDGILATEDELAVDKSAAEKTALGMLELHDTESARAVVGMLESENELCINETVANDGPLALGGMLATKSPLDVVANVAKDGALAADVIVVTESPLQINDSFTKESALTIEGMPKIGVDLATDVTLVPGASGATDEPVIPSVQVIPSLEEDDVESIRLRFDDNSEDEPAVLTKFGDMEVDLGDISETLTDPDNPCDPVVTSDMSGKRGLSPEPGPSGMQYQFSACDSDSEEQKYYSDTKMYLGNNIPERYLNEVFLNTALNIERARNRTLQKKICVGTTLCSDRDVINASKEVLDSRCKECKACIRIEKLMKIWALLTSKIELTRNTNGQNNNTEAPDSDLVEGEQDEIEVPSDSTDEDLNQDLYLDLMPKHSGLMLKIGTNVQHGRELLAVCLIPKCNSRKTVFSLEEKEKVLDGLIETLTLSQNDNTKVTNDSTEVRIDNAEGRNDGTHSRKDSTANNTEGRRISLSSDSELSDSTTTPEEETTNRVQHHKIKTAKRRLAKAKLMQDRIIKEKEKEIAAFELQKRAEIARIMAKKNICEVEITRYQESFTSMQKVKEKEFVRLKTEIRKKPEIQNRSMFDEVDGLAEELDYEKDAKSMDQEDLADADLDQPSTSGQASAESGVVVDAPVYYPTAEEFADPLIFYEKIWPEAVRFGICKIVPPPGWQPPPHKEDDEMRFDVTNQYISRLFSRWGPAARELCAIKLCLQQQNISVNRLPNVDNVEINLPKLYHTVQRHGGLETVINQNRWGRVVEDLKFTKGALNERRLDQIYVKYLLPYDTLSHTERHEIMAKVELAWQRKYQKLFDRALNPLYRQQRMLGGLPDESEEEETEDPATVKALSESEDCIIKGGTTTLAKFKKVASFAESAFGQGSEGGPPPKVKDVEEEYWRLVTHSSEHLCVNSAAIDTGDEGYGFTKNNNDPYSLHPWNPKVVSQNRRNVLSYLDAIIGLTVPTLLLGMLYSTSCWHKDPHQIAWLEYQHIGPPRVWNAIPEAESETFRKAVEILCPTAAQNKSLWLSTDISMIPPDMLRKHNVTLSRVEQSPSEYIMVFPNTYTSCISTGYTVAESVYFAPPSWLKRLWNVFKETRESCEPTMFAMEHLLYNIARDATDREIMQTAQPLFERMLHEEVTNRQMLQERGVTFVQDLYSSDLPTPSTSSGKKKGKQQYIPRDQEECEYCRATLYLSKVKGLTRRNTLLCLEHALMMLDTDKFRDADINHVQVLVHVSVKELNTVNDDMKRRLRSPLRTGSSRDSSANM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01084919; iTF_01084031;
90% Identity
iTF_01084919;
80% Identity
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