Odup020960.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ochropacha duplaris
Gene Symbol
nfxl1
Assembly
GCA_951361185.1
Location
OX592714.1:295777-298245[+]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 2 2.7e+04 -7.8 5.6 15 19 134 138 133 138 0.81
2 20 0.025 3.4e+02 2.0 0.2 4 10 169 175 168 176 0.96
3 20 2.7e-07 0.0037 17.8 16.1 3 19 186 202 185 202 0.95
4 20 1.3e-06 0.017 15.7 11.6 3 19 239 255 237 255 0.92
5 20 0.45 6.1e+03 -2.0 1.7 6 10 280 284 279 285 0.76
6 20 2.9e-09 4e-05 24.1 12.3 1 19 290 308 290 308 0.99
7 20 3.5e-06 0.048 14.3 18.0 3 19 345 361 337 361 0.86
8 20 2 2.7e+04 -5.3 2.2 5 10 384 389 384 389 0.88
9 20 5.2e-05 0.71 10.6 15.0 1 18 395 412 395 413 0.97
10 20 1e-10 1.4e-06 28.8 12.1 1 19 422 440 422 440 0.98
11 20 2 2.7e+04 -5.3 1.6 1 5 479 482 479 482 0.88
12 20 0.0002 2.8 8.6 6.4 9 19 488 498 486 498 0.89
13 20 0.0021 28 5.4 8.6 1 12 507 517 507 517 0.96
14 20 0.37 5.1e+03 -1.8 3.3 14 18 546 550 546 551 0.85
15 20 0.21 2.9e+03 -1.0 0.4 8 12 567 571 566 578 0.80
16 20 9e-06 0.12 13.0 5.3 1 11 587 597 587 598 0.97
17 20 0.67 9.2e+03 -2.6 1.5 15 18 612 615 611 616 0.82
18 20 0.00037 5.1 7.8 12.0 4 18 629 644 627 645 0.85
19 20 2 2.7e+04 -6.1 2.9 9 13 651 655 651 655 0.74
20 20 4.8e-06 0.065 13.9 11.6 1 18 686 704 686 705 0.87

Sequence Information

Coding Sequence
aTGTCACGGCGATACCGAGATGCTGCTGCCAAACTGCAGCAAAATGTTCAAAAACACTTGAAAGAAATGAAAGAACTTTCATCATCAGAAGATGAGGAGCCCTACGAATCAAGCGTCTTGGAAGGAGTGTTCCAGAGCTACTGGAGCGGCGGCGGCGACACTCGCATGATAAATAGAACAAGGAACCTTCTAGAAGAAGCGATCAGCGGCCGACCGGTGACCTGCCTTATTTGCATAGCGTCAATCAAAAGAACCGACGCAATATGGACCTGTGACCACTGCTACTCATACTTCCATTTATCATGCATACAGAAGTGGGCCAACGATAGCATTAGTTTAAGAAACGAAGAGAATCATGGACCAATTAGTGTTGTAGTTCCTAAAAAAATTGAATGGTGCTGCCCCAAGTGCCGACAATCATACAGTAAGGAGGAAATCCCCCGTAAATATAGATGCTATTGTGGTAAGGCTGATGATCCACCTTACCACCCTTGGTTAATACCACATACATGTGGAGATGTTTGTGGGAAGCGGCTGTCCTCTGGAGATAGCTGTCAACATAAGTGTCTCCTACTGTGTCACCCTGGCCCCTGCCCTCCGTGCCCACAAACAGTCAATGGAGTATGTTATTGCCTAAAAGAACGCAAAAAAGTAAGATGTAGTGCAGCTAAATGGTCATGCGGACAACAATGTAAGAAAACTCTATTTTGCAGAACacataaatgtgaaaacatATGTCACAGTGATGATTGTCCTCCCTGCAGTTACACAAGCTTACAAGCTTGCCAATGTGGTGCCGAAAAATCCAAACGTCCATGCAATGACCCACACTGGCAATGCCAGAAACCATGCTCCAAACCATTCTCTTGTGGCTTTCATAAATGTGAGAGAGTTTGCCATTCAGGCACCTGTGGGACATGCCCCAACTCTGGCATGAGATCCTGTCCCTGCGGAGCAAATGAACGGATAGTGCAATGTCCTGATGTCATGGAAACTTGTCTTGGGACTTGTGGCAAAGATCACTTAGATTGTGAACACAACTGTCCAGAAAAATGCCATAAAGGTTCCTGTCCACCATGTCAAGTACTAATCCAAAAGAAATGCCAATGTTCTGCCCATGTGAGGTCTCTCCCATGCAGCAAAGAATTTAAATGTGAAACCAAATGTAGAGGCATAAGACCATGTGGCAAACATGCTTGTGCCCGAAAGTGTTGCAATAGCAATTGTCCTCCATGTGAAAAAATCTGTGACAAACCACTGCAATGTGGACGGCATAAATGTGCTAGCGTCTGCCACCGGGGCCCATGCTACCCTTGCTCCAGAGAATCTAAAATTACTTGTAGATGTAAAGAAACTTACCTTACCGTCCCTTGCGGCagagaaaaaaatgttaaaccaCCAAAGTGCAGTGTGTtatgcaaaattaaatataaatgtggaCACACTGAAGATAATAAACATTCCTGCCATTTCGGAGACTGTCCCCCTTGCAAAGCAATTTGCTATAAGACATACCCTTGCGGACATGAGTGCAAAGCAACATGTCATGAGTTTGTTGCAGTAGTTTTTAAACAAGTTGAAAAGCCAGCTACCCCATGGGAAGTGCAGCCtccaaaaactaaaattatgacACTGGAGTGTCCTCCTTGTGAGACACCTGTCCCTGTTATTTGTTTTGGTGAACATGAGACAGATGACCAACCTTGTCATTCAGCTCGCCGGCGCCCATGTGGCAGAGAATGTGGACGCCCACTGCTTTGTGGTAACCACAAGTGCACACTGCTTTGCCATCTCTACAAAGCTGATTCGGCATATCCTAATACTCCATACAGCTGTAAACCATGTAACAAAGAATGTTTAGTTCCCCGTCCTATGAAATGTGCACATAAGTGTGCTCTGAAAGCTTGTCATCCAGGAGTGTGCCCCCCTTGCGACATGTTTGAACGAATACTCTGCCATTGTGGGGTAACAGAACTTTATCTACGTTGCCGGGAGTACTCTCTAGCCACTGAAGAAATGCTATCTTGTAAGCAGCAATGTCCTAAGAATTTGGAATGTGGACATCGCTGCCGTAACACCTGTCATTCGGGACAATGCAGCAACCAAGTGTGtactaaaaaaactaaagtataTTGTCCTTGTGGTAATTTAAAGAAGGAAGCTGCTTGTAATTCAGTCCGCAGTAGCGAAGTTAAAATTGAATGTGATGACACTTGTgaagcaaagaaaatttctatcaaacttgaaaaagaaaaagaagaaaagaGACTTATGGAGTTGGAAGAGGAGAGAAATAGAAAAGAATTGGCTGAATATGAGTGGAAATTAAGTGGgaagaaaaagaaatataaagaaAAGAAATTAGTTACAGCAAGAGATGATAGGAATTTTGTACAGAAATATTGGCTGCCGGTGTTTTCAAGTGTTGTTGTGGTGTCAGCAGCTCTCTATTATATACTTTATGTATGA
Protein Sequence
MSRRYRDAAAKLQQNVQKHLKEMKELSSSEDEEPYESSVLEGVFQSYWSGGGDTRMINRTRNLLEEAISGRPVTCLICIASIKRTDAIWTCDHCYSYFHLSCIQKWANDSISLRNEENHGPISVVVPKKIEWCCPKCRQSYSKEEIPRKYRCYCGKADDPPYHPWLIPHTCGDVCGKRLSSGDSCQHKCLLLCHPGPCPPCPQTVNGVCYCLKERKKVRCSAAKWSCGQQCKKTLFCRTHKCENICHSDDCPPCSYTSLQACQCGAEKSKRPCNDPHWQCQKPCSKPFSCGFHKCERVCHSGTCGTCPNSGMRSCPCGANERIVQCPDVMETCLGTCGKDHLDCEHNCPEKCHKGSCPPCQVLIQKKCQCSAHVRSLPCSKEFKCETKCRGIRPCGKHACARKCCNSNCPPCEKICDKPLQCGRHKCASVCHRGPCYPCSRESKITCRCKETYLTVPCGREKNVKPPKCSVLCKIKYKCGHTEDNKHSCHFGDCPPCKAICYKTYPCGHECKATCHEFVAVVFKQVEKPATPWEVQPPKTKIMTLECPPCETPVPVICFGEHETDDQPCHSARRRPCGRECGRPLLCGNHKCTLLCHLYKADSAYPNTPYSCKPCNKECLVPRPMKCAHKCALKACHPGVCPPCDMFERILCHCGVTELYLRCREYSLATEEMLSCKQQCPKNLECGHRCRNTCHSGQCSNQVCTKKTKVYCPCGNLKKEAACNSVRSSEVKIECDDTCEAKKISIKLEKEKEEKRLMELEEERNRKELAEYEWKLSGKKKKYKEKKLVTARDDRNFVQKYWLPVFSSVVVVSAALYYILYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00762242;
90% Identity
iTF_01252423;
80% Identity
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