Basic Information

Insect: Ochropacha duplaris
Gene Symbol: -
Assembly: GCA_951361185.1
Location: OX592716.1:5323778-5330079[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0013 0.096 13.8 0.4 3 23 230 251 229 251 0.97

2 8 0.00094 0.069 14.2 2.9 1 23 256 278 256 278 0.98

3 8 0.0018 0.13 13.4 4.8 1 23 282 304 282 304 0.98

4 8 0.064 4.7 8.5 0.2 1 23 317 340 317 340 0.94

5 8 0.0034 0.25 12.5 1.0 1 23 344 366 344 366 0.98

6 8 9e-05 0.0066 17.4 0.6 2 23 397 418 396 418 0.96

7 8 0.13 9.8 7.5 0.7 1 12 424 435 424 448 0.84

8 8 0.18 13 7.0 0.4 2 23 453 475 453 475 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0013	0.096	13.8	0.4	3	23	230	251	229	251	0.97
2	8	0.00094	0.069	14.2	2.9	1	23	256	278	256	278	0.98
3	8	0.0018	0.13	13.4	4.8	1	23	282	304	282	304	0.98
4	8	0.064	4.7	8.5	0.2	1	23	317	340	317	340	0.94
5	8	0.0034	0.25	12.5	1.0	1	23	344	366	344	366	0.98
6	8	9e-05	0.0066	17.4	0.6	2	23	397	418	396	418	0.96
7	8	0.13	9.8	7.5	0.7	1	12	424	435	424	448	0.84
8	8	0.18	13	7.0	0.4	2	23	453	475	453	475	0.97

Sequence Information

Coding Sequence: ATGGCTGCCTGCTTGGACCTAAAACTAATAGTAAAGCATATTGCGAACAGCACTTTAGAAgataatttatgtattatttgtCTGGGTCCCCTTGGAGAAGATCATGAGAATATATTCACAAAAGTTTGCAAGGAAGATAAGGAATATAGCATAGCGGATGTGCTTCAGAAACTTTGTCATACTGAGTTTACAGATGAGGATAATTATAATACCTGCATTGACTGTTTCATGAGAGCGTCTATAGCCTACAAGTTCTTTCTCCAAGCGAAACGTAGTGAAGAAATAATCGAGTTTTATACTAATGAGCTTTTAAACAATATAGCCTCTATAGACTTATCTAATGACAATTCAATGAATACACTGTGTATTTTACCTGTTTTGAGCATTGAGTCTGATTTTGACTATGATTTGAAAGGCATTGGTAAACATAACCGAGAGGAATGTGTTGgtaaatcaacaaaattaattgaaattgagGTAAAGAATGAAGATACCAAATTTCACGAAGACAATATTGTAATGATAGTTAATGATGATGGTGaacaaatgttttataaattgaCTGATGGAGAACTTTTACCGCTTGATGCCTCTGAAATGAAAAAGTGCAGTAAAGCTCTCAAGAGCAGTGTGTCAGTACCTAAGAAGAAACAGAGAAGGAAGCGGGATCCGATGGCATTTAGAGCTTGTCCAAAATGTCCTGTTAAATACAGATTTTTGTCAAGATTAAAAGAGCACATGAAATCTGAACACAATATGAATCTATATATTTGTAAGGTTTGTAAAGAAACAACTTGCAGTGAAGAGGAATATAATAATCACCAAAAAACACATACTGGATTACATGAATGTGATGTATGTAATACGGTCTTCAAAAAATGTGACACAATGATATCACATCAAAAGCGACATGAAGATATGAAAAATTTGAGTAAAACTGAAGGTGCCCACATTTGTGAAGTGTGTGGTGTAGTTTTGGAGAATGAAGAAAAGTTAAATGAGCATAACAATAGTAAGCATGTCAAGAAATTCACTTGCTACTATTGCGGACGGATGTATAGGGGCGAGATCAGTTTTGATTTGCATATTAAGAAACATGAATTGCAAATGAGTAAGGAGATGCACAAATCAACAGAATCAAAAGTGGCGTCACCCGCACAGAAGGCAAAGAGCAATAAACGGAAGTGCATGTGTCCTACCTGCGGTCGGTATTTTGTGGACGAGAGGGCGCTGCTGTGGCATCAGAGACTGCATAACAACGAACGTCCTTATACATGCGATGTGTGCGGACGCGGGTTCGTGTCTGTGAACCGTCGCAACCAGCACGCGCTGTGTGCGCACACGGCGCCCTCGCGTCGCTGTCCACTGTGCCCCGCGCTCTTCCACTTGCGCTCCATGGTCAACACGCACATCAAGAAGGTACATCTCAAAACTCACAAGCGTCGTTACCGCACTAGTAAACATCAGAACGTTTTCTGGCGCACGGAGACTGTACCCATTGAGGAGTTGAGCATCTCTATACAAAGTGAAATACTGGAACTGAAAGCTGCTAAAGAGAACGAAAAGAACTGGGTAATTCATAGTGAACCAGATATAGATTTGGAGCAGATGTTGTCTTCGTAA
Protein Sequence: MAACLDLKLIVKHIANSTLEDNLCIICLGPLGEDHENIFTKVCKEDKEYSIADVLQKLCHTEFTDEDNYNTCIDCFMRASIAYKFFLQAKRSEEIIEFYTNELLNNIASIDLSNDNSMNTLCILPVLSIESDFDYDLKGIGKHNREECVGKSTKLIEIEVKNEDTKFHEDNIVMIVNDDGEQMFYKLTDGELLPLDASEMKKCSKALKSSVSVPKKKQRRKRDPMAFRACPKCPVKYRFLSRLKEHMKSEHNMNLYICKVCKETTCSEEEYNNHQKTHTGLHECDVCNTVFKKCDTMISHQKRHEDMKNLSKTEGAHICEVCGVVLENEEKLNEHNNSKHVKKFTCYYCGRMYRGEISFDLHIKKHELQMSKEMHKSTESKVASPAQKAKSNKRKCMCPTCGRYFVDERALLWHQRLHNNERPYTCDVCGRGFVSVNRRNQHALCAHTAPSRRCPLCPALFHLRSMVNTHIKKVHLKTHKRRYRTSKHQNVFWRTETVPIEELSISIQSEILELKAAKENEKNWVIHSEPDIDLEQMLSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01417255;
90% Identity: -
80% Identity: -