Basic Information

Insect: Ochropacha duplaris
Gene Symbol: -
Assembly: GCA_951361185.1
Location: OX592718.1:1737913-1760575[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.015 1.1 10.4 0.1 1 23 514 537 514 537 0.95

2 15 0.044 3.2 9.0 3.8 2 23 720 741 719 741 0.95

3 15 7.6e-05 0.0055 17.7 0.3 2 23 784 807 783 807 0.97

4 15 0.087 6.3 8.0 0.2 1 23 813 835 813 835 0.93

5 15 0.0078 0.57 11.3 5.3 1 23 841 863 841 864 0.96

6 15 0.04 2.9 9.1 0.0 2 19 874 891 873 894 0.90

7 15 0.22 16 6.8 0.2 1 23 973 995 973 995 0.98

8 15 2.6 1.9e+02 3.4 7.2 1 23 1002 1024 1002 1024 0.95

9 15 0.0017 0.13 13.4 1.8 1 23 1075 1098 1075 1098 0.95

10 15 0.00084 0.061 14.4 0.5 1 23 1105 1128 1105 1128 0.98

11 15 0.0048 0.35 12.0 0.2 2 23 1150 1172 1149 1172 0.96

12 15 0.00052 0.038 15.0 2.7 2 23 1194 1216 1193 1216 0.95

13 15 0.00063 0.046 14.8 0.6 1 23 1252 1274 1252 1274 0.96

14 15 7.9e-05 0.0058 17.6 0.1 1 23 1280 1302 1280 1302 0.98

15 15 0.00048 0.035 15.1 0.7 3 23 1310 1331 1308 1331 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.015	1.1	10.4	0.1	1	23	514	537	514	537	0.95
2	15	0.044	3.2	9.0	3.8	2	23	720	741	719	741	0.95
3	15	7.6e-05	0.0055	17.7	0.3	2	23	784	807	783	807	0.97
4	15	0.087	6.3	8.0	0.2	1	23	813	835	813	835	0.93
5	15	0.0078	0.57	11.3	5.3	1	23	841	863	841	864	0.96
6	15	0.04	2.9	9.1	0.0	2	19	874	891	873	894	0.90
7	15	0.22	16	6.8	0.2	1	23	973	995	973	995	0.98
8	15	2.6	1.9e+02	3.4	7.2	1	23	1002	1024	1002	1024	0.95
9	15	0.0017	0.13	13.4	1.8	1	23	1075	1098	1075	1098	0.95
10	15	0.00084	0.061	14.4	0.5	1	23	1105	1128	1105	1128	0.98
11	15	0.0048	0.35	12.0	0.2	2	23	1150	1172	1149	1172	0.96
12	15	0.00052	0.038	15.0	2.7	2	23	1194	1216	1193	1216	0.95
13	15	0.00063	0.046	14.8	0.6	1	23	1252	1274	1252	1274	0.96
14	15	7.9e-05	0.0058	17.6	0.1	1	23	1280	1302	1280	1302	0.98
15	15	0.00048	0.035	15.1	0.7	3	23	1310	1331	1308	1331	0.95

Sequence Information

Coding Sequence: ATGGAGGAGCCTCTACCGCCTCTGATGTTGTGCATGGAGAATTTATCTGGTGAAGAAGTGACACTGCCAATAGAGCCTCATGATGATTTTCAGACATTCCTGGATAAGGCTAAATCACTTCTAGGCTTTGATGTCGACATAAATTCTATAACAAGAAACCAACAAGTTTCTCTAAACGATAATATTTACCAATTCCTCATAACTGCTGATTACACAGCTGATGGCACATTGGCCACACAAAACTTTGATGAAATGTTGGAACCAAACGATGGCTCCAACGACCTGGTATACATTTTAGATGATGGCACTCAAATACGAGCTTCACAAATACATTTTGACAACGAAGATCCCCCTGTAGACCTGACAGCAGAGAAAATACCATTCGTTAAATATACAGATGATTGTGTCGATGATTTAGATATTGAAAACCTTAATATTGAAGAAACCAAAaactataatatcattgaaagTCCTGTATCACAATGGTCTAGTCAAAACTCCAGCCCGAAATGTAGTTTCATTAATAGTCTACCTTTCAAACTAGTTTGCAATAATACTTCGGCTTTCGAAGCGCAATTTACGAAGTTTCTAGAAGCAAACACGGCAAAAACTTACGCGACTTTGAATCCTGTTGCTAATAGAAATAAGTCTCCTAGAAGTTTAATTAAGGAGAACTTTAAAAAGTTTGACGATAACTTCCAGAAAGATGATTTAAGTTATACTCGTGAAGATATTTTGAATATGTTCAAAGATTCTCCCGTAGCTTCGTTACCATATGAAAATCACGAGAGAAGGCATGTGAGAAAAACTGATCCATCTCGGCTAGTACATAAGAACTGGAATGCGAAGCCAACTTACGTCGATATGGGCGGAGTTCTGATTGCTGGAAGTGAAAGCCAAATATGTTTCATCTGCGGGAAGCATGTTGATAAAAACGCTGATAAgctatatttatttgataacgAAGACCAGAAGATACACAGATGTTCACCGCAGAAGAAAATGTCGACTCAACTCAAGATCATATGCGAAGAATGTCTGAACGAAAACTTTATACCTTGTAGAATGAAAAGTGCGAACCAATTTCTAAACCCCGACGAATATTTGGTGATACGCAACAACCAGCAGTATATATTCCAAAAGACGAAAAACTTCAACTACTGCAGAGCCAAAGTCATAGACAAAGAAGTAATAGACAAAGATGAATTGGTTAAAGTTGAAATAGGGTCCGATGGTGAGATCGTAACAAAACCCGTAGACATTGACTCCAGATCTGAAgatataataattgttaaagACGAAATGAAGGAAAGTTCTAGTGACGTGGAGATAATTGAGCCGGAATCGGAGATAGATAAAATTGTCGACAATTTGGAGGAAGCTGACGAAGACGTTAAGCGATTTTTGGGGAAGTATTCGTGTGATACTGAAGATTTGAAAGAGTTAAAGTGCAGGTTCTGCGAACAACTTTTCGCGGCTCTACCAGAAGTGATAGAACATGGTGAAACACATAAACACAGCTTGGAGGATGGCGAAGTGTTCCCTTGTCCGCTATGTAATTATGGTTATGCCAACTTTAAATGGCTGAAGGGTCACCTAAAAGCAGCTCATGAAAAGCATGAAAAGAAAGAGGaagtagaaaataaagaatGTGAAAATAAAGATGACGTCAAAACTGaaaGCTCCGAGAATCTTGAGAAGgaagaaaagaaagaagatGATAAAGAAATATTGGAATCCAATGCTGAATCGactGAGCGCATAATAAAAACGGAGGTGAAACAAGAATGCTTGGACTCTAGTGATGATGAAATATGGATCGTGCAGACAGCCGATGATGAAGCCTCCATGCAGCTCCAGTTATTAATAGACGCCGCCAAGGCTAAAGGAAAAGAAAATGATGACTCAAAGAAGACTCAAAAATGTTCAAATTGCAGTCAAACTATAGAGTCAACAGACACCGCACATAAATGTAAACGACGTGGAAGAAAGCGTAAAACTGTGGGAAAAGAATATAATTTACTGTGCATACCTACTCGCGAAGATTTCTATAAGAGAGCTCAAGGCAGAACAAAAGCTGTGAATCCATCCAAAAGTGATTTACTTAAACCTCGTAAGAAAAAAACTAAGGAAACCAGTTCAAACCCACAAATAGTGACGTGTCACAATTGTAATGAGTCTTTCACGTCCAAAGTTCGACTCAAGTTCCACatGCAATTCCACGAATCTTCAAACATGCTATCTTCTGACGGTCAATACTCGTGCTACGATTGTGAAAACGCTATATTTGGAACAGAAACTGAATTATTTGATCACATACACTTCCAACATGGGAAGCAGAAGAGGTGGCAGTGTCCAGTAGACGGCTGCGGAAAGACCTTCTACCTCAGGGCAACACTAACGAAACACAGTCGCACGCACACAGACACGCGTCGGTATGTGTGCGTGACTTGCGGCAAACGGTTCCTCGACAAGCAGACACTTGACGAGCATGGTGTCACGCATCTACAGATAAAGCCGTTCCAATGCCACATCTGCCTGAAGCAGCTGACCCGTCGATCTCGACTCCGAATGCACCTGCGAGCTCACCACGAGGAACTGTCTCCCAGACTAGTGCTAGTGTGTGCCGTGTGTGGACGCGCCTTTAGGGACCAGGGGGACGCACAGGATCACGCAACGAAATCGACGGAATGTATAGAAGCTTTTGCGAGCGAACTGAAGGAAGAAACTGAGGAGGTGATGGTTCAGCTGTCGCCCACTAGTGGGCTTGTCAGACAAACAGTGCAAGTTGTGGAATCACCTAAATTCTCAAAACCAATCCAGCGGGAAGTATTCAGTGTGCTGAGCACAGCGATGATCTCCAAGATACCTGACGAGTGCAAGACCATCATACGAGTGGTGGAGATTGAGAAGGCGTTCCGTTGCGAGTTTTGTGAAGATGTGTTTTACTTGGAGGACGGGTTGAACAATCATCGTTTAATACATAAAGGTGTCAAAAATCCATTCACCTGTCACATATGTAAAGTGAGCTTCGCTACATACTCCAGATGTACGACACACAAGACGACCCACGGCTTCTACAAGCGGCCCCTGGCGGAGGCCAAGCGGTCGGCGGCCCTCGTCGCTCAGGGGCCCTCGGGGGCCGCAGGGGCCGCGGGGCCCTCAGAATGCGACACGCATACACCTATACTGGGATACGGAGACTTTCCAGTCGTGAAACATTTCTTGTGCGAGGACTGCGGTCGCTCGTACCTCCATTGGACATATTTGCAAGTCCACCGACGAATGAAACACGCAAACGAAAACTTTGTATATAAATGCAATCAATGTGATATCACCTTTCCTAACAGctgGAGTGTGGCGTACcatagaaagaaaatacatgGAAAAACTGGACGAGATTTTCCCAATCATACCACTAAAATGGTTAAAGAAGATTACAGGATTCCTTGCAGAGATTGCGACGAGGTTCTGCCAAACAAAACTGCTCTCTATAAACATAGGAAGAAGGAGCACAGTGATATGTCGCTCCGATACAATTGTAAACCAAGTGAGACTAATTCTCATACTACTGCAGTCAGCTGCGGTCACTGCGGCATGAGCTTCGCAAATGCGCACGATCTACATACGCATCTCAAACAAGTACACATGCATACAGCGACGCAGCCGTGCGAGGTGTGCACGGCGCACGCGAAGGCTCGGGCGGCTGTGAGTGCGGGTACAAGTGCGAGCGTGAGTACGAGCGTGGGTGCGCACGCGTGTCCGGTGTGCGCGCGCACGTTCCGCACGGCGTCGATGCGCGCCGATCACCTGCGCACACATACCGACGAGAGACCGTACCCCTGCGACGTGTGTGGACTCGCCTTCCGAAGGTCGACGGCGATGCGCAACCATCGTCTGATCCATACGGGAGTGCGTGCATGGGCGTGCGGCCGCTGCCCCAAGCGGTTCCGCATCCGATCCGACCTACGCACCCACCTGCGGCTCAAGCACCCCGCGCACCTCGCGCTCATTGAGATTGAAGGATTAAACCCAACAACGGAAGAGGTGATGAAATACTTGTCGATGAACAACATACCCCAGGACAAAGTTATAGAAATATCCAAGATATCATTTTCAAAGGGTACGTCAAGTGTAATACCGAACAGTGCCCGCGCGTTATCGATGCTGAGTAACATAACCCGAACGCAAATTACATTCAATCGACCCCTACCACCTCAAAATGACGAGTTCCAACCTGTACGTCGTGGTAGGGGCATTGCGAAGAACCCGCGCAGACCCAAGATATTACAACGTGGGGGTGATGAAGTACCCCACCAGAACCCGAATGATTATCCTATAGCTGTTAGCGTTACTGGCGAGGAGTTATCAGAACTAAATGTGCAATTACTGCTAAGAGATGGGGTCCTGGTCAATGGAAACCAAATGGTACAGCTAGAGTTAGACGACTCTATGTTAATGGAGTAA
Protein Sequence: MEEPLPPLMLCMENLSGEEVTLPIEPHDDFQTFLDKAKSLLGFDVDINSITRNQQVSLNDNIYQFLITADYTADGTLATQNFDEMLEPNDGSNDLVYILDDGTQIRASQIHFDNEDPPVDLTAEKIPFVKYTDDCVDDLDIENLNIEETKNYNIIESPVSQWSSQNSSPKCSFINSLPFKLVCNNTSAFEAQFTKFLEANTAKTYATLNPVANRNKSPRSLIKENFKKFDDNFQKDDLSYTREDILNMFKDSPVASLPYENHERRHVRKTDPSRLVHKNWNAKPTYVDMGGVLIAGSESQICFICGKHVDKNADKLYLFDNEDQKIHRCSPQKKMSTQLKIICEECLNENFIPCRMKSANQFLNPDEYLVIRNNQQYIFQKTKNFNYCRAKVIDKEVIDKDELVKVEIGSDGEIVTKPVDIDSRSEDIIIVKDEMKESSSDVEIIEPESEIDKIVDNLEEADEDVKRFLGKYSCDTEDLKELKCRFCEQLFAALPEVIEHGETHKHSLEDGEVFPCPLCNYGYANFKWLKGHLKAAHEKHEKKEEVENKECENKDDVKTESSENLEKEEKKEDDKEILESNAESTERIIKTEVKQECLDSSDDEIWIVQTADDEASMQLQLLIDAAKAKGKENDDSKKTQKCSNCSQTIESTDTAHKCKRRGRKRKTVGKEYNLLCIPTREDFYKRAQGRTKAVNPSKSDLLKPRKKKTKETSSNPQIVTCHNCNESFTSKVRLKFHMQFHESSNMLSSDGQYSCYDCENAIFGTETELFDHIHFQHGKQKRWQCPVDGCGKTFYLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHHEELSPRLVLVCAVCGRAFRDQGDAQDHATKSTECIEAFASELKEETEEVMVQLSPTSGLVRQTVQVVESPKFSKPIQREVFSVLSTAMISKIPDECKTIIRVVEIEKAFRCEFCEDVFYLEDGLNNHRLIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRPLAEAKRSAALVAQGPSGAAGAAGPSECDTHTPILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFVYKCNQCDITFPNSWSVAYHRKKIHGKTGRDFPNHTTKMVKEDYRIPCRDCDEVLPNKTALYKHRKKEHSDMSLRYNCKPSETNSHTTAVSCGHCGMSFANAHDLHTHLKQVHMHTATQPCEVCTAHAKARAAVSAGTSASVSTSVGAHACPVCARTFRTASMRADHLRTHTDERPYPCDVCGLAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPAHLALIEIEGLNPTTEEVMKYLSMNNIPQDKVIEISKISFSKGTSSVIPNSARALSMLSNITRTQITFNRPLPPQNDEFQPVRRGRGIAKNPRRPKILQRGGDEVPHQNPNDYPIAVSVTGEELSELNVQLLLRDGVLVNGNQMVQLELDDSMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -