Basic Information

Insect: Ochropacha duplaris
Gene Symbol: ZFPM1
Assembly: GCA_951361185.1
Location: OX592705.1:9943106-9944665[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 2.9e-05 0.0021 19.0 0.8 3 23 207 227 205 227 0.96

2 10 2.6e-07 1.9e-05 25.4 2.1 1 23 233 256 233 256 0.97

3 10 2e-07 1.5e-05 25.8 1.2 1 23 265 287 265 287 0.99

4 10 0.00073 0.053 14.6 0.3 1 23 293 315 293 315 0.98

5 10 0.00015 0.011 16.7 7.4 1 23 321 343 321 343 0.97

6 10 5.4e-06 0.0004 21.3 2.7 1 23 349 371 349 371 0.98

7 10 6.9e-05 0.005 17.8 4.3 1 23 378 401 378 401 0.97

8 10 0.25 18 6.6 0.7 2 23 432 454 431 454 0.93

9 10 5.4 3.9e+02 2.4 1.0 1 19 460 480 460 485 0.80

10 10 0.00075 0.055 14.5 0.6 1 23 491 514 491 514 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	2.9e-05	0.0021	19.0	0.8	3	23	207	227	205	227	0.96
2	10	2.6e-07	1.9e-05	25.4	2.1	1	23	233	256	233	256	0.97
3	10	2e-07	1.5e-05	25.8	1.2	1	23	265	287	265	287	0.99
4	10	0.00073	0.053	14.6	0.3	1	23	293	315	293	315	0.98
5	10	0.00015	0.011	16.7	7.4	1	23	321	343	321	343	0.97
6	10	5.4e-06	0.0004	21.3	2.7	1	23	349	371	349	371	0.98
7	10	6.9e-05	0.005	17.8	4.3	1	23	378	401	378	401	0.97
8	10	0.25	18	6.6	0.7	2	23	432	454	431	454	0.93
9	10	5.4	3.9e+02	2.4	1.0	1	19	460	480	460	485	0.80
10	10	0.00075	0.055	14.5	0.6	1	23	491	514	491	514	0.91

Sequence Information

Coding Sequence: ATGGATTTGAAGATCTGTCGATTATGCTGTGAAAGCGACGACGTCACAATTAGTATTTTCAAAAGCAGTTATGATGGTGTTGAACTCGGCACGTGTATAATGCATTGCTTTAAAAATGTACATCTACAGAAAAACGATGGGCTGCCTGCGCTCATTTGCGTTGATTGTGAACAGCAGGTTTTGGGTTACTATCAGTTTGTGCTGAGATGTGAAGCTTCAGATAAGAAATTACGTTCGCTGGTTCCTCGGTGTGCGGATAATTCTGTGCCTGATGTGAAAGATGAGAATGAAGATTTAAAGGACGAACTTCCATTTGAAGAACAACTAGATGGAGAACAGCTCGACGGAGAGGAACTAGTGCAAGACAACTCATTAGAAATAAAAGATGAATTATCTGATGGCAATGTTAGCTCTGAGAACGAACAAGAACCTATTTTAGAACCTCAAGAAGACAAATCTGAAAATGCAATATTAAAGGACAAATGTAAGGTAAGAAATAACCATGAGACTGATTCTGATATTAAACAGGAACCAGAAGACAAAACAGAAAAAGCATTAAACAACAAATGTCAggctgaaaagaaaaaaaataagaagtTTAAAAGGGTAAAATCAATATGCTCTGTCTGTGGACGACATTGTGCCAATCCATCAACTCTTGCTGTACATATGCGTGCCCACAGCAATGAACGGCCATACCCATGTACCTATTGTGCAAAATCATTCAAAGACAATAGCACACTGAAGAGGCATATGTCGAGAACCCACTTAAAAGTGAAAAGACAAAAAGACTTTACTTGTGAGAGTTGCGGCAAAAGTTTTTATTCTAAAAATGATTTGATCACTCACATAAGAACCCACACGGGTGAAACTCCATATGCCTGTCCTTTATGTCCAGGGAAGTTTAAACAAATAAGTGCTATGCTAAGGCACAAGAGACGTCATACTGGAGAAAAATTACACTCATGTCAAGAATGCTCTAAAAGTTTCTGTACTAAAGAAGAATTGAAAAATCATCTACATGTTCacagtaacataaaaaaattctcatgtacaatctgcAACATCCTGttcaagtataaaaataatttaaagaaacatattaaaacacatacaaatgataataaaacatttatttgcaATTTCTGCGGACGTATTTGTACAACGAAAGGAAATTTGAGGATTCACATTTGTCGACAGCATTCAGAAAAGTCAGGTTATTGTAATATATGTACTAAACTTGTTGCAAATATTGAAGTCCATATGTGGAAGCATACGGGAGAAAGACCACTGAAATGTGAGCTGTGTACCAGTAGTTTCTTTGAATTAAAAGCTTTAGGCCGCCACATAAACTTTAAACATATGAAAACTGATAAACATAAGTGTGAAACAGAGGGTTGTTTGAAAAGCTTCCCAATAAGATCTATGTTGGATTTCCATACGGCAAAATTTCACAGTACTCAAGTCCCTTTCCCATGCGACAGATGCTCACGAGGGTTCTATAGAAAAAATGATCTTGCAAGACATAAAATTGGTACTCACAAggaaaaacttaaataa
Protein Sequence: MDLKICRLCCESDDVTISIFKSSYDGVELGTCIMHCFKNVHLQKNDGLPALICVDCEQQVLGYYQFVLRCEASDKKLRSLVPRCADNSVPDVKDENEDLKDELPFEEQLDGEQLDGEELVQDNSLEIKDELSDGNVSSENEQEPILEPQEDKSENAILKDKCKVRNNHETDSDIKQEPEDKTEKALNNKCQAEKKKNKKFKRVKSICSVCGRHCANPSTLAVHMRAHSNERPYPCTYCAKSFKDNSTLKRHMSRTHLKVKRQKDFTCESCGKSFYSKNDLITHIRTHTGETPYACPLCPGKFKQISAMLRHKRRHTGEKLHSCQECSKSFCTKEELKNHLHVHSNIKKFSCTICNILFKYKNNLKKHIKTHTNDNKTFICNFCGRICTTKGNLRIHICRQHSEKSGYCNICTKLVANIEVHMWKHTGERPLKCELCTSSFFELKALGRHINFKHMKTDKHKCETEGCLKSFPIRSMLDFHTAKFHSTQVPFPCDRCSRGFYRKNDLARHKIGTHKEKLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -