Odup023027.1
Basic Information
- Insect
- Ochropacha duplaris
- Gene Symbol
- ZNF131_1
- Assembly
- GCA_951361185.1
- Location
- OX592717.1:6089677-6095696[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.6 44 5.4 0.2 2 21 111 130 110 131 0.93 2 23 0.027 2 9.6 5.6 1 23 161 183 161 183 0.97 3 23 0.0025 0.18 12.9 2.2 1 23 188 210 188 210 0.97 4 23 0.38 28 6.0 4.9 2 20 214 232 213 234 0.91 5 23 8.8e-05 0.0064 17.5 1.2 1 23 244 266 244 266 0.98 6 23 6.2e-06 0.00045 21.1 1.2 1 23 272 294 272 294 0.99 7 23 0.0019 0.14 13.3 4.0 1 23 301 323 301 324 0.96 8 23 8.2e-06 0.0006 20.7 1.7 2 21 442 461 441 462 0.92 9 23 0.54 40 5.5 0.1 3 23 468 488 467 488 0.95 10 23 3.4 2.5e+02 3.0 6.0 2 23 494 516 494 516 0.95 11 23 4.4e-05 0.0032 18.4 0.2 1 23 521 543 521 543 0.96 12 23 4.6e-05 0.0034 18.3 0.8 1 23 579 602 579 602 0.93 13 23 7e-06 0.00051 20.9 1.6 1 23 608 630 608 630 0.98 14 23 2.8 2e+02 3.3 0.7 1 23 664 687 664 687 0.92 15 23 0.0023 0.17 13.0 0.5 2 21 813 832 812 833 0.93 16 23 0.0005 0.037 15.1 1.2 3 23 868 889 867 889 0.97 17 23 2.5e-05 0.0019 19.2 0.7 2 23 895 916 894 916 0.96 18 23 0.92 68 4.8 0.5 3 20 921 938 920 940 0.91 19 23 3.8e-06 0.00028 21.8 0.9 1 23 966 989 966 989 0.95 20 23 0.00049 0.036 15.1 0.5 1 23 995 1017 995 1017 0.95 21 23 0.1 7.3 7.8 0.1 1 23 1023 1045 1023 1045 0.97 22 23 0.0015 0.11 13.6 0.5 1 23 1051 1074 1051 1074 0.94 23 23 0.00014 0.01 16.8 0.4 3 23 1081 1102 1079 1102 0.95
Sequence Information
- Coding Sequence
- ATGGAGTCATCGACATCGCTGCCTAAGAAACTGTGCATCTACTGCGTATCTAAACTATTAGATATCGTACCATTCATAGAACTGTGCAGGGACTCGGACAGAAAATGGAGAAGTGTTGTAGAACTCCTGCATTTACCATCAACAGTTAAACAGAATGTCCACGTAATACTGTCGAATGATTGTGAGAATAGAGAGCTGGTACATTGTACTAAAAATGAAATACAAGATACTAAAGAAGCTTTAAGGGTGTTAAAACAACGTTTAACGAGAATTGACTACTACCACCGTAGAGTAGAGAGAGAGAAAAAAACAGCTTCAAAAATGGAGTTGTCGTGTCCGGAATGTGAACTACGTTTCCTTTCCGTGTTCAAGTTAAATAAGCATATAAAATACTCGAATAAAAAGATGTGTCCATTCTGCTATGAGATTTTGGACCTACAGGCGTTCAAAGATCACGCGGCGAAACATAAACTGAATTTATATTTTTGCGATTTTTGCCATGAGAGTtttgtgaaaaagaaaaatttcTTGATGCATAAATTAAAGCATTCCAGAGGCAATCACGTGTGTCTTGAATGCAAGCTATCATTTTCAAACTTGAACAAACTCACGCTACATCTGTCTAGACACAAGCGTTGTATTTGTTTGACCTGCAACAAGAAATTTTCGAATAAAAACTGCTTTTTAAATCACGCGAAAGGTTGTGCGCAATATAGACACCCTAAAAAATTCATTTGCGATTATTGTCTTAAAGAGTACTCTTCTAAAACATCTTTAAAATTGCATATAAAAATGCATGTCAAAGGGTATAGGTACCAGTGTGAAAAGTGTGGGAAAACGTTTACGATTAGAGCCCATTTGGAGGAGCATGGCAATACTCACGAGAAAGTGTTCAATAGATACACCTGTAGTAAATGTGAATTGAACTATAGTACTCGTAGAGGTTACCAAAGGCATTTGAAAATTCATCACACAAAAGAAGAGGATAATAAGCAGTCCAAAGTCTTGGAGGAGCCGTCCTTGCCTCAGGGGATATGCAGAACATGCTCTGAAGATATCGTCGCAGCAGTTAACATCACACAATTGTGCAAACACTCCGCACAACATTGGTCCGCGGCAACCGAATACCTGGCCCAAATCGAAGATCCGACAGAAGAAGACAAGTGCTACTTTGCCTTTTATAATACCGAAGAAAACTCTATATTTAAAGACCAATATGATCACGTCCCAAATGTAGAAACAGCTCTTGAAAGATTAAATAGAAAAATTGATTTTGATATACCTAAGCCCACGAGAATAAGACGAACCAATGATGTGTCTTGCGTGTGCCCAGATTGTGGTAAATCGTTTACCAACccgttttatttgaataaacattttaagagTGTTCCTAAAAGAGCATGCAGTGAATGTGGTCTTGTTGTTCTGAAGCAAAATTTGAGCAAACATTTGTCCAAAGCCCACGATATAGTCGTTGGGACCTGCAGTCGTTGCCACGACGTGTTCGACGATGAGCAACATTTGAAGCAACATTGGCACAAATCTCACGGCGCAAAAAATTTCTCTTGTGATGACTGCGGCCGAAGTTTCATGAACGAAAGAGCGTTGAGCGCTCACATGTATGCCCATAGCTTATTCCATTGCAAATCGTGCAGCCTTAGCTTTGAAAATCGTAAATGCTGTAAGCACCACGAGAAACAATGCACCTCAAAACAGCAACTTATCTCTTCGACGTACGAATGCGACCATTGCGGTGTGTCATACACAAGAAAGCCGTCTTTAAAGATTCACATAGTGCAAAAACACTTGAATGTTCTCCCATTCGTTTGCCCAACATGTGGGAAACGTACATCAACTAAAGCTCACTTGAGATCACATGAATTGACGCACAAGAAAGAGCGGAAGATATACGAGTGTTACTGCGGAGCGAAACTGATGTCAGAGCTGGGGTATCAACTGCACCAGAGGATACACAGCGGAGAGAAGCCTTTCGCGTGTGAGGAGTGCGGAGATAGATTCCTGTCGTCTTCGCGGAGGTTGGATCATATGAAGAGGAGACATAGAGGCACTAAAGGCCTGCCGTATGCTTGCGAGAAATGTGCAGCGCGTTTCGTTAAGGATGAAGCTCTTTGCCCCCCAGGAGTATGTGTCAGTTGCGCCAGCACCGCCCTCGCCGCCCAGGAGTTCAGCATCTTTGTCAAAAACGCCCAAAAAATGTGGCACAAAGCAGTAACCAGCTTATCAGTACTAACGACCTCCTCGGCCCCAAACGTCAAATCCATTTACGCGTTCGTCAGAAAAACGGACCTATCAATTCAAACAGTTAAAGACTTCGCCGGCGGTGACGCGAAAACCGTTCTAAACCGACTAAAAAACCGATTGAGTAAAAAGCCGGTTGATAAGAAACCGAGGAACGCGCGCACTGGACCATCGTGTATCTGTCCGGATTGTGGCAAAACATTCCTGAGTCCATACTATTTGAGTATGCATTTGAAGAACAGCGGGCAAAAGGACGCTTGCTTGCTTTGTGGCGCGGTAGTGTTTAGAGGTCGGGAAATGCAGGAGCATCTATCAGTAGTACATAAGCAAAAAATGACGCTATGTAAATATTGTCCCATGTTATTCACTAGTCAATCCAAACTATTTAAACACGTTAAAAAAGCACACGGCCCCGGTATCCTAACCTGCAGTGATTGCGGAAGGACATTCACAAGGAACGCATCGTTTGAGCTACACTCTCAAATGCATGCAGTTCGAATATGCCGAGCTTGTGGTATACAGTTTACTAATCGCGGCTGTTATAGAGAACACCGCGCTCAGTGTGAACCAGACGCAAAACCTGACGCGCAAACTGTACCGCGTAACAGGCGCTCGAATATTCGCGACCCAGCGCAGTATACTTGCGATCATTGCGGGAAAACATACAACTCAAGGCCACAATTGAAGAACCATATCATTTGGATACATATGGACGTTCGTCCTCACCAATGCCAATGGTGTGGCAAACGTTTTTACACCCCAGCAAGATTAGCAGAACATACTGTGGTCCATACTCGCGTCAGAAACTTCGAGTGTGATATTTGTGGTGTGAAATTAGTTTCCAAAATGGCTGCCGTGTATCACAGGAGGCGGCATACAGGCGAGAAGCCATATAAATGTGAGGACTGCGGGGAAACGTTTATATCCGCATCAAGGAGATCGGAACATGCCAAGAGAAGGCACAATGCGTTAAGAATCAACTGCAGTATGTGTCCGGGCACTTTTGTAAGACGATATGATTTAAAAAAGCATATGGACAAAGTTCATAAAAAGGAAGACATTCAAGAGGAAGATATTTTGAGACAGGATGTAATTTTGAAACAAGAAGTGATATTGAAACAAGAAGTAATAGTGAAACAGGGTGATTATGTCGTGGAATTATGCAAAATTGAGAATTGA
- Protein Sequence
- MESSTSLPKKLCIYCVSKLLDIVPFIELCRDSDRKWRSVVELLHLPSTVKQNVHVILSNDCENRELVHCTKNEIQDTKEALRVLKQRLTRIDYYHRRVEREKKTASKMELSCPECELRFLSVFKLNKHIKYSNKKMCPFCYEILDLQAFKDHAAKHKLNLYFCDFCHESFVKKKNFLMHKLKHSRGNHVCLECKLSFSNLNKLTLHLSRHKRCICLTCNKKFSNKNCFLNHAKGCAQYRHPKKFICDYCLKEYSSKTSLKLHIKMHVKGYRYQCEKCGKTFTIRAHLEEHGNTHEKVFNRYTCSKCELNYSTRRGYQRHLKIHHTKEEDNKQSKVLEEPSLPQGICRTCSEDIVAAVNITQLCKHSAQHWSAATEYLAQIEDPTEEDKCYFAFYNTEENSIFKDQYDHVPNVETALERLNRKIDFDIPKPTRIRRTNDVSCVCPDCGKSFTNPFYLNKHFKSVPKRACSECGLVVLKQNLSKHLSKAHDIVVGTCSRCHDVFDDEQHLKQHWHKSHGAKNFSCDDCGRSFMNERALSAHMYAHSLFHCKSCSLSFENRKCCKHHEKQCTSKQQLISSTYECDHCGVSYTRKPSLKIHIVQKHLNVLPFVCPTCGKRTSTKAHLRSHELTHKKERKIYECYCGAKLMSELGYQLHQRIHSGEKPFACEECGDRFLSSSRRLDHMKRRHRGTKGLPYACEKCAARFVKDEALCPPGVCVSCASTALAAQEFSIFVKNAQKMWHKAVTSLSVLTTSSAPNVKSIYAFVRKTDLSIQTVKDFAGGDAKTVLNRLKNRLSKKPVDKKPRNARTGPSCICPDCGKTFLSPYYLSMHLKNSGQKDACLLCGAVVFRGREMQEHLSVVHKQKMTLCKYCPMLFTSQSKLFKHVKKAHGPGILTCSDCGRTFTRNASFELHSQMHAVRICRACGIQFTNRGCYREHRAQCEPDAKPDAQTVPRNRRSNIRDPAQYTCDHCGKTYNSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGVKLVSKMAAVYHRRRHTGEKPYKCEDCGETFISASRRSEHAKRRHNALRINCSMCPGTFVRRYDLKKHMDKVHKKEDIQEEDILRQDVILKQEVILKQEVIVKQGDYVVELCKIEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -